Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001095g0100 Nicotiana tabacum HOM05D006699 ORTHO05D008399 4.1e-204 714.5 366 100.0
Nitab4.5_0009754g0010 Nicotiana tabacum HOM05D006699 ORTHO05D008399 1.0e-162 577.0 386 81.9
PGSC0003DMG400020443 Solanum tuberosum HOM05D006699 ORTHO05D008399 1.1e-143 513.8 333 81.4
Sopen07g027160 Solanum pennellii HOM05D006699 ORTHO05D008399 1.3e-141 506.9 333 80.5
Solyc07g055050.3 Solanum lycopersicum HOM05D006699 ORTHO05D008399 1.7e-141 506.5 333 79.9
PGSC0003DMG400007857 Solanum tuberosum HOM05D006699 ORTHO05D008399 1.6e-128 463.4 331 71.9
Peaxi162Scf00384g00423 Petunia axillaris HOM05D006699 ORTHO05D008399 6.2e-128 461.5 324 73.1
Dinv15443 Davidia involucrata HOM05D006699 ORTHO05D008399 3.4e-126 455.7 333 70.9
CAN.G1049.6 Capsicum annuum HOM05D006699 ORTHO05D008399 2.4e-124 449.5 332 70.5
Nitab4.5_0000537g0130 Nicotiana tabacum HOM05D006699 ORTHO05D008399 2.4e-124 449.5 334 70.4
Cfa023335 Carpinus fangiana HOM05D006699 ORTHO05D008399 6.0e-123 444.9 332 70.8
QL08p041677 Quercus lobata HOM05D006699 ORTHO05D008399 8.7e-122 441.0 332 69.9
CANSAT64G2599 Cannabis sativa HOM05D006699 ORTHO05D008399 1.5e-121 440.3 332 69.0
QL08p041638 Quercus lobata HOM05D006699 ORTHO05D008399 3.3e-121 439.1 332 69.6
CiPaw.04G132200 Carya illinoinensis HOM05D006699 ORTHO05D008399 9.6e-121 437.6 331 68.0
GSVIVG01020707001 Vitis vinifera HOM05D006699 ORTHO05D008399 9.6e-121 437.6 324 68.8
CSS0012388 Camellia sinensis var. sinensis HOM05D006699 ORTHO05D008399 1.3e-120 437.2 335 66.9
Peaxi162Scf00469g00217 Petunia axillaris HOM05D006699 ORTHO05D008399 2.8e-120 436.0 319 72.7
Haze_13371 Corylus avellana HOM05D006699 ORTHO05D008399 2.4e-119 433.0 332 69.0
TAR626G0153 Trochodendron aralioides HOM05D006699 ORTHO05D008399 2.4e-119 433.0 364 64.8
RcHm_v2.0_Chr2g0129651 Rosa chinensis HOM05D006699 ORTHO05D008399 3.1e-119 432.6 332 67.5
MSTRG.15092 Avicennia marina HOM05D006699 ORTHO05D008399 1.5e-118 430.3 340 66.8
Eucgr.A01914 Eucalyptus grandis HOM05D006699 ORTHO05D008399 1.3e-117 427.2 328 66.8
MD09G1238000 Malus domestica HOM05D006699 ORTHO05D008399 1.7e-117 426.8 332 66.3
Prupe.3G118500 Prunus persica HOM05D006699 ORTHO05D008399 2.9e-117 426.0 331 66.5
Solyc12g010870.3 Solanum lycopersicum HOM05D006699 ORTHO05D008399 2.9e-117 426.0 292 73.6
FvH4_6g27380 Fragaria vesca HOM05D006699 ORTHO05D008399 4.9e-117 425.2 335 66.9
Sopen12g006230 Solanum pennellii HOM05D006699 ORTHO05D008399 4.9e-117 425.2 288 74.3
MD17G1230900 Malus domestica HOM05D006699 ORTHO05D008399 1.1e-116 424.1 332 66.9
HanXRQChr17g0557951 Helianthus annuus HOM05D006699 ORTHO05D008399 3.2e-116 422.5 338 65.7
TWI59G0496 Tripterygium wilfordii HOM05D006699 ORTHO05D008399 5.5e-116 421.8 325 66.5
Potri.014G142200 Populus trichocarpa HOM05D006699 ORTHO05D008399 7.1e-116 421.4 326 67.2
Ciclev10015418m.g Citrus clementina HOM05D006699 ORTHO05D008399 2.1e-115 419.9 345 65.5
arahy.Tifrunner.gnm1.ann1.0K2T49 Arachis hypogaea HOM05D006699 ORTHO05D008399 1.0e-114 417.5 328 65.9
arahy.Tifrunner.gnm1.ann1.GAG0UF Arachis hypogaea HOM05D006699 ORTHO05D008399 2.3e-114 416.4 328 65.9
Thecc.01G150500 Theobroma cacao HOM05D006699 ORTHO05D008399 2.3e-114 416.4 337 66.2
Lsat_1_v5_gn_8_140640 Lactuca sativa HOM05D006699 ORTHO05D008399 3.0e-114 416.0 333 64.9
SGA_v2.0_scaffold9G04816 Striga asiatica HOM05D006699 ORTHO05D008399 5.1e-114 415.2 336 65.2
Lj1A681T38 Lonicera japonica HOM05D006699 ORTHO05D008399 1.1e-113 414.1 335 63.9
Psat7g165360 Pisum sativum HOM05D006699 ORTHO05D008399 4.3e-113 412.1 334 65.9
Gohir.A12G086400 Gossypium hirsutum HOM05D006699 ORTHO05D008399 1.3e-112 410.6 336 63.7
PGR042G0843 Punica granatum HOM05D006699 ORTHO05D008399 1.3e-112 410.6 332 65.4
COL.COLO4_33580 Corchorus olitorius HOM05D006699 ORTHO05D008399 2.1e-112 409.8 348 62.6
CsaV3_6G018450 Cucumis sativus L. HOM05D006699 ORTHO05D008399 2.8e-112 409.5 346 65.0
Nitab4.5_0011277g0010 Nicotiana tabacum HOM05D006699 ORTHO05D008399 2.8e-112 409.5 336 64.6
FAN14G2123 Fragaria x ananassa HOM05D006699 ORTHO05D008399 3.7e-112 409.1 347 64.3
AUR62039018 Chenopodium quinoa HOM05D006699 ORTHO05D008399 8.1e-112 407.9 342 63.7
ClCG02G017820 Citrullus lanatus HOM05D006699 ORTHO05D008399 8.1e-112 407.9 348 64.9
Migut.M00261 Erythranthe guttata HOM05D006699 ORTHO05D008399 8.1e-112 407.9 327 66.4
ECA233G1148 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.4e-111 407.1 326 64.7
Gorai.008G095400 Gossypium raimondii HOM05D006699 ORTHO05D008399 1.4e-111 407.1 335 63.6
Rhsim06G0131200 Rhododendron simsii HOM05D006699 ORTHO05D008399 1.8e-111 406.8 294 68.0
VMungo1127G1340 Vigna mungo HOM05D006699 ORTHO05D008399 1.8e-111 406.8 328 64.9
Medtr4g079850 Medicago truncatula HOM05D006699 ORTHO05D008399 2.4e-111 406.4 331 65.0
PSO229G0039 Papaver somniferum HOM05D006699 ORTHO05D008399 3.1e-111 406.0 345 62.0
PSO675G3944 Papaver somniferum HOM05D006699 ORTHO05D008399 1.2e-110 404.1 343 60.6
Gohir.D12G085000 Gossypium hirsutum HOM05D006699 ORTHO05D008399 2.6e-110 402.9 335 63.0
Phvul.011G130500 Phaseolus vulgaris HOM05D006699 ORTHO05D008399 4.5e-110 402.1 328 64.3
Ca_18111_v3 Cicer arietinum L. HOM05D006699 ORTHO05D008399 5.8e-110 401.7 337 63.2
Glyma.06G277600 Glycine max HOM05D006699 ORTHO05D008399 7.6e-110 401.4 325 64.9
unitig_0.g2026 Utricularia gibba HOM05D006699 ORTHO05D008399 7.6e-110 401.4 362 61.3
AL4G26070 Arabidopsis lyrata HOM05D006699 ORTHO05D008399 1.7e-109 400.2 336 61.9
Manes.02G091200 Manihot esculenta HOM05D006699 ORTHO05D008399 1.7e-109 400.2 333 64.6
AL4G26150 Arabidopsis lyrata HOM05D006699 ORTHO05D008399 2.9e-109 399.4 336 61.9
Lalb_Chr01g0006001 Lupinus albus HOM05D006699 ORTHO05D008399 2.9e-109 399.4 331 63.7
C04p60180 Brassica napus HOM05D006699 ORTHO05D008399 6.5e-109 398.3 333 63.4
BolC4t27520H Brassica oleracea HOM05D006699 ORTHO05D008399 6.5e-109 398.3 333 63.4
FAN09G4348 Fragaria x ananassa HOM05D006699 ORTHO05D008399 8.4e-109 397.9 366 60.7
Carub.0004s1225 Capsella rubella HOM05D006699 ORTHO05D008399 1.4e-108 397.1 336 62.2
EL10Ac2g03349 Beta vulgaris HOM05D006699 ORTHO05D008399 1.9e-108 396.7 326 62.6
Thhalv10016897m.g Eutrema salsugineum HOM05D006699 ORTHO05D008399 2.5e-108 396.4 328 62.2
Sp4g13510 Schrenkiella parvula HOM05D006699 ORTHO05D008399 2.5e-108 396.4 332 63.0
AT2G31040 Arabidopsis thaliana HOM05D006699 ORTHO05D008399 5.5e-108 395.2 336 61.6
BraA04t17899Z Brassica rapa HOM05D006699 ORTHO05D008399 5.5e-108 395.2 333 62.5
Lj3g0015335 Lotus japonicus HOM05D006699 ORTHO05D008399 5.5e-108 395.2 335 60.9
A04p23730 Brassica napus HOM05D006699 ORTHO05D008399 7.1e-108 394.8 333 62.2
CDE10G1046 Ceratophyllum demersum HOM05D006699 ORTHO05D008399 9.3e-108 394.4 335 63.0
CARHR124570 Cardamine hirsuta HOM05D006699 ORTHO05D008399 6.0e-107 391.7 336 60.4
Sabra14G0107300 Salix brachista HOM05D006699 ORTHO05D008399 7.9e-107 391.3 319 65.2
Actinidia11153 Actinidia chinensis HOM05D006699 ORTHO05D008399 4.3e-105 385.6 318 66.0
Hund07812 Selenicereus undatus HOM05D006699 ORTHO05D008399 3.8e-101 372.5 341 58.9
DCAR_017060 Daucus carota HOM05D006699 ORTHO05D008399 1.4e-100 370.5 326 60.4
ATR0602G053 Amborella trichopoda HOM05D006699 ORTHO05D008399 1.3e-96 357.5 309 62.5
FAN02G3357 Fragaria x ananassa HOM05D006699 ORTHO05D008399 1.1e-95 354.4 305 63.0
Aa31LG1G7380 Aethionema arabicum HOM05D006699 ORTHO05D008399 1.9e-92 343.6 331 57.4
Os01g0673800 Oryza sativa ssp. japonica HOM05D006699 ORTHO05D008399 1.0e-90 337.8 317 59.3
Sc06g0009080 Simmondsia chinensis HOM05D006699 ORTHO05D008399 1.1e-89 334.3 265 64.2
Manes.01G133200 Manihot esculenta HOM05D006699 ORTHO05D008399 7.4e-89 331.6 277 64.3
Aqoxy1G02064 Aquilegia oxysepala HOM05D006699 ORTHO05D008399 9.1e-87 324.7 251 69.3
Sed0016519 Sechium edule HOM05D006699 ORTHO05D008399 1.0e-85 321.2 349 54.4
AUR62037610 Chenopodium quinoa HOM05D006426 ORTHO05D008399 3.8e-85 319.3 223 72.6
Sed0000889 Sechium edule HOM05D006699 ORTHO05D008399 2.5e-84 316.6 277 61.7
Lju1655A0G36 Lonicera japonica HOM05D006699 ORTHO05D008399 2.7e-83 313.2 399 46.9
MELO3C013567.2 Cucumis melo HOM05D006699 ORTHO05D008399 3.7e-80 302.8 230 69.1
Oeu018752.1 Olea europaea HOM05D006699 ORTHO05D008399 6.3e-80 302.0 233 66.5
Cc05_g08340 Coffea canephora HOM05D006699 ORTHO05D008399 1.7e-77 293.9 248 62.9
TPR.G28306 Trifolium pratense HOM05D006699 ORTHO05D008399 3.2e-76 289.7 279 57.0
Eucgr.K01127 Eucalyptus grandis HOM05D006699 ORTHO05D008399 4.7e-75 285.8 331 51.1
vmacro12376 Vaccinium macrocarpon HOM05D006699 ORTHO05D008399 4.4e-73 279.3 323 48.9
Ah.01g003530 Amaranthus hybridus HOM05D006426 ORTHO05D007737 2.4e-71 273.5 173 75.7
HPP92_009665 Vanilla planifolia HOM05D006699 ORTHO05D008399 1.0e-69 268.1 378 43.7
Mapoly0038s0046 Marchantia polymorpha HOM05D006699 ORTHO05D008399 4.0e-66 256.1 339 44.8
Pp3c8_13580 Physcomitrium patens HOM05D006699 ORTHO05D008399 5.9e-62 242.3 313 46.3
AagrBONN_evm.TU.Sc2ySwM_228.3020 Anthoceros agrestis HOM05D006699 ORTHO05D008399 2.3e-58 230.3 271 47.2
SMO014G0045 Selaginella moellendorffii HOM05D006699 ORTHO05D008399 4.1e-55 219.5 303 43.2
SEGI_23271 Sequoiadendron giganteum HOM05D006699 ORTHO05D008399 1.7e-53 214.2 276 45.3
Atru.chr6.2796 Acer truncatum HOM05D006699 ORTHO05D008399 4.7e-51 206.1 184 60.3
Cpa.g.sc52.174 Carica papaya HOM05D006699 ORTHO05D008399 1.1e-47 194.9 185 56.2
Zm00001eb360100 Zea mays HOM05D006699 ORTHO05D008399 2.1e-43 180.6 223 50.7
Cc05_g08350 Coffea canephora HOM05D006699 ORTHO05D008399 4.4e-33 146.4 89 82.0
Atru.chr6.2795 Acer truncatum HOM05D006699 ORTHO05D008399 9.9e-25 118.6 65 84.6
BraA03t11005Z Brassica rapa HOM05D006699 ORTHO05D008399 1.6e-22 111.3 95 62.1
A03p17330 Brassica napus HOM05D006699 ORTHO05D008399 3.9e-21 106.7 95 60.0
Cre01.g049600 Chlamydomonas reinhardtii HOM05D006699 ORTHO05D008399 1.1e-20 105.1 292 27.4
CDE10G0215 Ceratophyllum demersum HOM05D006699 ORTHO05D008399 1.6e-19 101.3 58 82.8
vmacro12375 Vaccinium macrocarpon HOM05D006699 ORTHO05D008399 3.6e-19 100.1 88 58.0
PRCOL_00001453 Prasinoderma coloniale HOM05D006699 ORTHO05D008399 4.7e-19 99.8 263 31.9
Ah.01g003520 Amaranthus hybridus HOM05D006699 ORTHO05D008399 1.1e-18 98.6 98 55.1
Lsat_1_v5_gn_2_38761 Lactuca sativa HOM05D006699 ORTHO05D008399 1.7e-16 91.3 77 59.7
MCO04G044 Micromonas commoda HOM05D006699 ORTHO05D008399 2.4e-15 87.4 278 28.4
C03p20440 Brassica napus HOM05D006699 ORTHO05D042655 6.9e-10 69.3 55 65.5
BolC3t14422H Brassica oleracea HOM05D006699 ORTHO05D042655 6.9e-10 69.3 55 65.5
Mapoly0094s0013 Marchantia polymorpha HOM05D005386 ORTHO05D006981 7.6e-09 65.9 166 31.3
TPR.G33085 Trifolium pratense HOM05D006699 ORTHO05D008399 6.4e-08 62.8 34 88.2
SMO338G0026 Selaginella moellendorffii HOM05D005386 ORTHO05D006981 1.9e-07 61.2 183 30.6
CSS0011344 Camellia sinensis var. sinensis HOM05D005386 ORTHO05D006981 2.4e-07 60.8 202 25.7
CSS0028109 Camellia sinensis var. sinensis HOM05D005386 ORTHO05D006981 2.4e-07 60.8 202 25.7
arahy.Tifrunner.gnm1.ann1.E6G7P2 Arachis hypogaea HOM05D005386 ORTHO05D006981 7.1e-07 59.3 161 28.0
CsaV3_1G015030 Cucumis sativus L. HOM05D005386 ORTHO05D006981 9.3e-07 58.9 158 28.5
Pp3c20_23100 Physcomitrium patens HOM05D005386 ORTHO05D006981 4.6e-06 56.6 194 25.3
SEGI_27763 Sequoiadendron giganteum HOM05D005386 ORTHO05D006981 6.0e-06 56.2 158 27.8


User provided reference genes

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