Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001092g0060 Nicotiana tabacum HOM05D007531 ORTHO05D009484 3.1e-45 184.9 100 100.0
Nitab4.5_0007540g0040 Nicotiana tabacum HOM05D007531 ORTHO05D009484 3.0e-32 141.7 98 75.5
Nitab4.5_0001699g0060 Nicotiana tabacum HOM05D007531 ORTHO05D009484 8.7e-32 140.2 98 74.5
Sopen07g022090 Solanum pennellii HOM05D007531 ORTHO05D009484 1.1e-29 133.3 98 71.4
Solyc07g042450.3 Solanum lycopersicum HOM05D007531 ORTHO05D009484 3.1e-29 131.7 98 70.4
PGSC0003DMG400013576 Solanum tuberosum HOM05D007531 ORTHO05D009484 2.9e-27 125.2 100 68.0
CAN.G660.22 Capsicum annuum HOM05D007531 ORTHO05D009484 3.8e-27 124.8 98 67.3
Peaxi162Scf00191g01018 Petunia axillaris HOM05D007531 ORTHO05D009484 2.7e-25 118.6 100 66.0
MSTRG.19432 Avicennia marina HOM05D007531 ORTHO05D009484 7.8e-25 117.1 106 67.0
Oeu028116.1 Olea europaea HOM05D007531 ORTHO05D009484 5.1e-24 114.4 105 62.9
Migut.L01591 Erythranthe guttata HOM05D007531 ORTHO05D009484 1.9e-23 112.5 110 60.0
SGA_v2.0_scaffold296G47570 Striga asiatica HOM05D007531 ORTHO05D009484 4.3e-23 111.3 111 58.6
Dinv42427 Davidia involucrata HOM05D007531 ORTHO05D009484 9.6e-23 110.2 100 61.0
CSS0023587 Camellia sinensis var. sinensis HOM05D007531 ORTHO05D009484 1.1e-21 106.7 100 60.0
Duzib168G1872 Durio zibethinus HOM05D007531 ORTHO05D009484 1.4e-21 106.3 100 58.0
SalBow6G4078 Salvia bowleyana HOM05D007531 ORTHO05D009484 4.5e-20 101.3 109 54.1
Cpa.g.sc82.75 Carica papaya HOM05D007531 ORTHO05D009484 9.9e-20 100.1 104 57.7
GSVIVG01015026001 Vitis vinifera HOM05D007531 ORTHO05D009484 9.9e-20 100.1 100 57.0
CANSAT56G3767 Cannabis sativa HOM05D007531 ORTHO05D009484 1.7e-19 99.4 100 56.0
Thecc.09G071300 Theobroma cacao HOM05D007531 ORTHO05D009484 1.7e-19 99.4 101 52.5
TWI63G1700 Tripterygium wilfordii HOM05D007531 ORTHO05D009484 1.7e-19 99.4 100 60.0
Dinv25515 Davidia involucrata HOM05D007531 ORTHO05D009484 8.4e-19 97.1 95 58.9
Sc14g0000480 Simmondsia chinensis HOM05D007531 ORTHO05D009484 8.4e-19 97.1 100 55.0
Cc06_g12620 Coffea canephora HOM05D007531 ORTHO05D009484 1.1e-18 96.7 112 53.6
Actinidia39623 Actinidia chinensis HOM05D007531 ORTHO05D009484 4.2e-18 94.7 100 57.0
Prupe.7G193100 Prunus persica HOM05D007531 ORTHO05D009484 4.2e-18 94.7 103 53.4
Gohir.A08G246700 Gossypium hirsutum HOM05D007531 ORTHO05D009484 9.3e-18 93.6 105 53.3
Gorai.004G285500 Gossypium raimondii HOM05D007531 ORTHO05D009484 9.3e-18 93.6 103 52.4
Potri.006G137401 Populus trichocarpa HOM05D007531 ORTHO05D009484 9.3e-18 93.6 100 54.0
THA.LOC104809045 Tarenaya hassleriana HOM05D007531 ORTHO05D009484 9.3e-18 93.6 102 53.9
MD15G1222700 Malus domestica HOM05D007531 ORTHO05D009484 1.2e-17 93.2 100 51.0
Duzib150G1567 Durio zibethinus HOM05D007531 ORTHO05D009484 2.1e-17 92.4 105 54.3
Aa31LG7G3950 Aethionema arabicum HOM05D007531 ORTHO05D009484 6.0e-17 90.9 102 49.0
Lsat_1_v5_gn_7_35440 Lactuca sativa HOM05D007531 ORTHO05D009484 6.0e-17 90.9 102 52.0
TAR626G0337 Trochodendron aralioides HOM05D007531 ORTHO05D009484 6.0e-17 90.9 69 65.2
Gohir.D08G267900 Gossypium hirsutum HOM05D007531 ORTHO05D009484 7.9e-17 90.5 103 51.5
AL1G31820 Arabidopsis lyrata HOM05D007531 ORTHO05D009484 1.0e-16 90.1 105 53.3
Manes.03G043400 Manihot esculenta HOM05D007531 ORTHO05D009484 1.0e-16 90.1 100 55.0
DCAR_010491 Daucus carota HOM05D007531 ORTHO05D009484 1.3e-16 89.7 100 52.0
COL.COLO4_21218 Corchorus olitorius HOM05D007531 ORTHO05D009484 1.8e-16 89.4 107 50.5
RcHm_v2.0_Chr2g0095821 Rosa chinensis HOM05D007531 ORTHO05D009484 1.8e-16 89.4 68 61.8
Carub.0001s1884 Capsella rubella HOM05D007531 ORTHO05D009484 2.3e-16 89.0 105 52.4
unitig_578.g16405 Utricularia gibba HOM05D007531 ORTHO05D009484 2.3e-16 89.0 103 51.5
ClCG11G000070 Citrullus lanatus HOM05D007531 ORTHO05D009484 3.0e-16 88.6 79 62.0
CsaV3_5G027570 Cucumis sativus L. HOM05D007531 ORTHO05D009484 3.0e-16 88.6 77 63.6
Eucgr.H05011 Eucalyptus grandis HOM05D007531 ORTHO05D009484 3.0e-16 88.6 69 65.2
Manes.16G092000 Manihot esculenta HOM05D007531 ORTHO05D009484 3.0e-16 88.6 70 61.4
PGR042G0735 Punica granatum HOM05D007531 ORTHO05D009484 3.9e-16 88.2 101 47.5
Sp1g17150 Schrenkiella parvula HOM05D007531 ORTHO05D009484 8.7e-16 87.0 102 49.0
Ciclev10010006m.g Citrus clementina HOM05D007531 ORTHO05D009484 1.1e-15 86.7 103 51.5
Rhsim05G0002900 Rhododendron simsii HOM05D007531 ORTHO05D009484 1.1e-15 86.7 101 49.5
BcaB07g31940 Brassica carinata HOM05D007531 ORTHO05D009484 2.5e-15 85.5 103 49.5
BcaC07g38992 Brassica carinata HOM05D007531 ORTHO05D009484 2.5e-15 85.5 103 49.5
Atru.chr7.1757 Acer truncatum HOM05D007531 ORTHO05D009484 3.3e-15 85.1 72 59.7
EL10Ac8g18992 Beta vulgaris HOM05D007531 ORTHO05D009484 3.3e-15 85.1 100 49.0
Hma1.2p1_0519F.1_g171380 Hydrangea macrophylla HOM05D007531 ORTHO05D009484 3.3e-15 85.1 105 52.4
CDE06G0851 Ceratophyllum demersum HOM05D007531 ORTHO05D009484 4.3e-15 84.7 78 57.7
HPP92_021129 Vanilla planifolia HOM05D007531 ORTHO05D009484 5.6e-15 84.3 100 48.0
HPP92_021130 Vanilla planifolia HOM05D007531 ORTHO05D009484 1.3e-14 83.2 100 48.0
FAN23G0531 Fragaria x ananassa HOM05D007531 ORTHO05D009484 1.6e-14 82.8 105 45.7
MBI19_g38003_MAGBIO Magnolia biondii HOM05D007531 ORTHO05D009484 2.1e-14 82.4 77 55.8
Thhalv10009175m.g Eutrema salsugineum HOM05D007531 ORTHO05D009484 2.8e-14 82.0 104 49.0
FvH4_1g09260 Fragaria vesca HOM05D007531 ORTHO05D009484 2.8e-14 82.0 105 44.8
FAN19G1112 Fragaria x ananassa HOM05D007531 ORTHO05D009484 2.8e-14 82.0 105 44.8
ECA246G1013 Erigeron canadensis HOM05D007531 ORTHO05D009484 4.8e-14 81.3 71 54.9
FAN26G1659 Fragaria x ananassa HOM05D007531 ORTHO05D009484 4.8e-14 81.3 104 45.2
FAN26G1806 Fragaria x ananassa HOM05D007531 ORTHO05D009484 4.8e-14 81.3 104 45.2
Sabra06G0107500 Salix brachista HOM05D007531 ORTHO05D009484 4.8e-14 81.3 46 78.3
vmacro17085 Vaccinium macrocarpon HOM05D007531 ORTHO05D009484 4.8e-14 81.3 46 80.4
C05p17640 Brassica napus HOM05D007531 ORTHO05D009484 8.1e-14 80.5 57 68.4
BolC5t30467H Brassica oleracea HOM05D007531 ORTHO05D009484 8.1e-14 80.5 57 68.4
Cfa002948 Carpinus fangiana HOM05D007531 ORTHO05D009484 8.1e-14 80.5 106 49.1
QL11p002692 Quercus lobata HOM05D007531 ORTHO05D009484 1.1e-13 80.1 72 62.5
Aqoxy7G04136 Aquilegia oxysepala HOM05D007531 ORTHO05D009484 1.4e-13 79.7 100 48.0
arahy.Tifrunner.gnm1.ann1.ETL5CI Arachis hypogaea HOM05D007531 ORTHO05D009484 1.4e-13 79.7 53 69.8
CARHR019840 Cardamine hirsuta HOM05D007531 ORTHO05D009484 1.4e-13 79.7 112 44.6
AT1G19240 Arabidopsis thaliana HOM05D007531 ORTHO05D009484 1.8e-13 79.3 106 48.1
A06p15390 Brassica napus HOM05D007531 ORTHO05D009484 1.8e-13 79.3 57 66.7
BraA06t24652Z Brassica rapa HOM05D007531 ORTHO05D009484 1.8e-13 79.3 57 66.7
Lj4g0024105 Lotus japonicus HOM05D007531 ORTHO05D009484 6.9e-13 77.4 74 55.4
Medtr4g124770 Medicago truncatula HOM05D007531 ORTHO05D009484 9.0e-13 77.0 75 49.3
arahy.Tifrunner.gnm1.ann1.J82KAY Arachis hypogaea HOM05D007531 ORTHO05D009484 2.0e-12 75.9 79 51.9
Phvul.004G046500 Phaseolus vulgaris HOM05D007531 ORTHO05D009484 2.0e-12 75.9 53 62.3
TPR.G12718 Trifolium pratense HOM05D007531 ORTHO05D009484 3.4e-12 75.1 74 52.7
Psat0s2373g0160 Pisum sativum HOM05D007531 ORTHO05D009484 6.5e-11 70.9 88 46.6
Glyma.17G046400 Glycine max HOM05D007531 ORTHO05D009484 1.4e-10 69.7 48 64.6
Sed0019513 Sechium edule HOM05D007531 ORTHO05D009484 1.9e-10 69.3 43 72.1
Os01g0144700 Oryza sativa ssp. japonica HOM05D007531 ORTHO05D009484 3.2e-10 68.6 86 45.3
Glyma.13G113300 Glycine max HOM05D007531 ORTHO05D009484 9.3e-10 67.0 47 63.8
VMungo1215G2546 Vigna mungo HOM05D007531 ORTHO05D009484 2.7e-09 65.5 42 64.3
Lalb_Chr11g0074031 Lupinus albus HOM05D007531 ORTHO05D009484 4.6e-09 64.7 99 42.4
Phvul.003G128000 Phaseolus vulgaris HOM05D007531 ORTHO05D009484 1.8e-08 62.8 77 44.2
FAN28G0689 Fragaria x ananassa HOM05D007531 ORTHO05D009484 2.3e-08 62.4 106 39.6


User provided reference genes

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