Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001091g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 3.7e-114 414.8 203 100.0
PGSC0003DMG400003679 Solanum tuberosum HOM05D006598 ORTHO05D008132 3.0e-92 342.0 204 81.4
CAN.G1226.16 Capsicum annuum HOM05D006598 ORTHO05D008132 4.4e-91 338.2 204 79.9
Nitab4.5_0010510g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 5.7e-91 337.8 201 82.1
Nitab4.5_0006280g0060 Nicotiana tabacum HOM05D006598 ORTHO05D008132 1.1e-89 333.6 201 81.6
Sopen04g033970 Solanum pennellii HOM05D006598 ORTHO05D008132 1.4e-89 333.2 204 80.4
Solyc04g080380.3 Solanum lycopersicum HOM05D006598 ORTHO05D008132 2.4e-89 332.4 204 80.4
Nitab4.5_0005730g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 5.4e-89 331.3 180 90.6
CSS0023084 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 9.2e-89 330.5 203 78.3
Dinv36084 Davidia involucrata HOM05D006598 ORTHO05D008132 2.3e-87 325.9 203 75.9
CSS0013932 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 5.0e-87 324.7 198 78.3
Sabra02G0198100 Salix brachista HOM05D006598 ORTHO05D008132 5.6e-86 321.2 203 75.4
Actinidia38007 Actinidia chinensis HOM05D006598 ORTHO05D008132 7.3e-86 320.9 203 76.4
Potri.002G260300 Populus trichocarpa HOM05D006598 ORTHO05D008132 7.3e-86 320.9 203 75.4
Rhsim07G0239600 Rhododendron simsii HOM05D006598 ORTHO05D008132 4.7e-85 318.2 203 75.4
TAR381G1379 Trochodendron aralioides HOM05D006598 ORTHO05D008132 1.8e-84 316.2 203 73.9
vmacro04528 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 1.8e-84 316.2 203 74.9
Atru.chr13.478 Acer truncatum HOM05D006598 ORTHO05D008132 5.2e-84 314.7 203 74.4
vmacro21641 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 5.2e-84 314.7 200 74.0
Cc10_g02850 Coffea canephora HOM05D006598 ORTHO05D008132 6.8e-84 314.3 203 73.9
Haze_17965 Corylus avellana HOM05D006598 ORTHO05D008132 8.9e-84 313.9 203 72.4
FAN27G1472 Fragaria x ananassa HOM05D006598 ORTHO05D008132 8.9e-84 313.9 203 73.4
FvH4_2g39790 Fragaria vesca HOM05D006598 ORTHO05D008132 1.2e-83 313.5 203 73.4
GSVIVG01009711001 Vitis vinifera HOM05D006598 ORTHO05D008132 1.5e-83 313.2 203 73.9
Actinidia15332 Actinidia chinensis HOM05D006598 ORTHO05D008132 2.0e-83 312.8 203 74.9
FAN15G1256 Fragaria x ananassa HOM05D006598 ORTHO05D008132 3.4e-83 312.0 203 72.9
Manes.18G026900 Manihot esculenta HOM05D006598 ORTHO05D008132 4.4e-83 311.6 203 72.4
Dinv39426 Davidia involucrata HOM05D006598 ORTHO05D008132 7.5e-83 310.8 203 74.9
FAN20G2142 Fragaria x ananassa HOM05D006598 ORTHO05D008132 1.3e-82 310.1 203 72.4
Prupe.1G379200 Prunus persica HOM05D006598 ORTHO05D008132 3.7e-82 308.5 203 72.4
MSTRG.25174 Avicennia marina HOM05D006598 ORTHO05D008132 4.9e-82 308.1 203 73.4
Glyma.04G032000 Glycine max HOM05D006598 ORTHO05D008132 4.9e-82 308.1 203 71.4
Rhsim06G0033600 Rhododendron simsii HOM05D006598 ORTHO05D008132 4.9e-82 308.1 200 73.0
Cfa018154 Carpinus fangiana HOM05D006598 ORTHO05D008132 6.4e-82 307.8 203 71.4
COL.COLO4_26313 Corchorus olitorius HOM05D006598 ORTHO05D008132 6.4e-82 307.8 200 72.0
Migut.C00732 Erythranthe guttata HOM05D006598 ORTHO05D008132 4.1e-81 305.1 203 71.9
TAR625G1490 Trochodendron aralioides HOM05D006598 ORTHO05D008132 4.1e-81 305.1 203 71.9
Lj4A39T66 Lonicera japonica HOM05D006598 ORTHO05D008132 1.2e-80 303.5 202 72.3
Medtr3g111840 Medicago truncatula HOM05D006598 ORTHO05D008132 1.6e-80 303.1 203 69.5
Glyma.06G032100 Glycine max HOM05D006598 ORTHO05D008132 2.0e-80 302.8 203 70.0
QL02p008626 Quercus lobata HOM05D006598 ORTHO05D008132 2.0e-80 302.8 203 70.0
arahy.Tifrunner.gnm1.ann1.9Y7K4V Arachis hypogaea HOM05D006598 ORTHO05D008132 2.7e-80 302.4 203 69.5
Duzib116G0116 Durio zibethinus HOM05D006598 ORTHO05D008132 2.7e-80 302.4 200 71.5
Ciclev10001322m.g Citrus clementina HOM05D006598 ORTHO05D008132 1.0e-79 300.4 203 70.9
SalBow7G0748 Salvia bowleyana HOM05D006598 ORTHO05D008132 1.0e-79 300.4 203 70.9
Psat5g017160 Pisum sativum HOM05D006598 ORTHO05D008132 2.3e-79 299.3 203 68.0
CiPaw.15G078300 Carya illinoinensis HOM05D006598 ORTHO05D008132 3.9e-79 298.5 203 71.4
arahy.Tifrunner.gnm1.ann1.KF7WGB Arachis hypogaea HOM05D006598 ORTHO05D008132 5.0e-79 298.1 203 68.5
Lsat_1_v5_gn_4_119301 Lactuca sativa HOM05D006598 ORTHO05D008132 5.0e-79 298.1 199 72.9
TPR.G12344 Trifolium pratense HOM05D006598 ORTHO05D008132 8.6e-79 297.4 203 67.5
Ca_15516_v3 Cicer arietinum L. HOM05D006598 ORTHO05D008132 1.9e-78 296.2 203 67.0
Sed0027447 Sechium edule HOM05D006598 ORTHO05D008132 1.2e-77 293.5 195 71.8
Aqoxy6G01111 Aquilegia oxysepala HOM05D006598 ORTHO05D008132 2.1e-77 292.7 203 69.0
VMungo1309G1899 Vigna mungo HOM05D006598 ORTHO05D008132 2.1e-77 292.7 203 67.5
Cpa.g.sc36.79 Carica papaya HOM05D006598 ORTHO05D008132 3.6e-77 292.0 200 71.0
ECA232G3558 Erigeron canadensis HOM05D006598 ORTHO05D008132 3.6e-77 292.0 203 69.0
THA.LOC104806941 Tarenaya hassleriana HOM05D006598 ORTHO05D008132 3.6e-77 292.0 200 68.5
Phvul.009G057800 Phaseolus vulgaris HOM05D006598 ORTHO05D008132 4.7e-77 291.6 203 67.0
CANSAT25G2965 Cannabis sativa HOM05D006598 ORTHO05D008132 1.4e-76 290.0 203 68.5
BcaC02g10811 Brassica carinata HOM05D006598 ORTHO05D008132 1.8e-76 289.7 201 67.7
C04p24910 Brassica napus HOM05D006598 ORTHO05D008132 1.8e-76 289.7 201 67.7
BolC4t23991H Brassica oleracea HOM05D006598 ORTHO05D008132 1.8e-76 289.7 201 67.7
MBI16_g31005_MAGBIO Magnolia biondii HOM05D006598 ORTHO05D008132 2.3e-76 289.3 202 67.8
BcaC06g31749 Brassica carinata HOM05D006598 ORTHO05D008132 6.8e-76 287.7 201 67.2
A06p48250 Brassica napus HOM05D006598 ORTHO05D008132 8.9e-76 287.3 201 67.2
BraA06t27693Z Brassica rapa HOM05D006598 ORTHO05D008132 8.9e-76 287.3 201 67.2
PSO541G3348 Papaver somniferum HOM05D006598 ORTHO05D008132 1.5e-75 286.6 203 68.0
CARHR181720 Cardamine hirsuta HOM05D006598 ORTHO05D008132 2.6e-75 285.8 201 66.2
Lj1g0003551 Lotus japonicus HOM05D006598 ORTHO05D008132 4.4e-75 285.0 203 66.5
Sp2g07390 Schrenkiella parvula HOM05D006598 ORTHO05D008132 1.3e-74 283.5 201 66.7
PSO675G7094 Papaver somniferum HOM05D006598 ORTHO05D008132 2.2e-74 282.7 203 67.5
Thhalv10003240m.g Eutrema salsugineum HOM05D006598 ORTHO05D008132 3.7e-74 282.0 201 66.2
Sc02g0006160 Simmondsia chinensis HOM05D006598 ORTHO05D008132 1.9e-73 279.6 203 66.0
Aa31LG9G12810 Aethionema arabicum HOM05D006598 ORTHO05D008132 2.4e-73 279.3 201 65.2
HPP92_018806 Vanilla planifolia HOM05D006598 ORTHO05D008132 3.2e-73 278.9 202 64.9
Eucgr.F01894 Eucalyptus grandis HOM05D006598 ORTHO05D008132 4.1e-73 278.5 203 67.0
PGR031G2630 Punica granatum HOM05D006598 ORTHO05D008132 5.4e-73 278.1 201 68.7
TWI36G0987 Tripterygium wilfordii HOM05D006598 ORTHO05D008132 9.2e-73 277.3 203 68.5
Carub.0008s0618 Capsella rubella HOM05D006598 ORTHO05D008132 1.6e-72 276.6 201 65.2
AL8G18360 Arabidopsis lyrata HOM05D006598 ORTHO05D008132 2.1e-72 276.2 201 64.7
SGA_v2.0_scaffold54G19518 Striga asiatica HOM05D006598 ORTHO05D008132 1.0e-71 273.9 204 63.2
TAR628G1208 Trochodendron aralioides HOM05D006598 ORTHO05D008132 3.0e-71 272.3 181 72.9
Ah.11g043150 Amaranthus hybridus HOM05D006598 ORTHO05D008132 3.9e-71 271.9 203 63.5
AUR62035446 Chenopodium quinoa HOM05D006598 ORTHO05D008132 3.3e-70 268.9 203 64.0
Hund26575 Selenicereus undatus HOM05D006598 ORTHO05D008132 1.2e-69 266.9 203 63.5
AT5G42760 Arabidopsis thaliana HOM05D006598 ORTHO05D008132 2.8e-69 265.8 197 64.0
CSS0023478 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 4.7e-69 265.0 157 80.3
Os03g0775000 Oryza sativa ssp. japonica HOM05D006598 ORTHO05D008132 1.8e-68 263.1 203 64.0
CDE04G2166 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 4.0e-68 261.9 208 61.5
ATR0810G155 Amborella trichopoda HOM05D006598 ORTHO05D008132 6.8e-68 261.2 202 63.4
Thecc.08G027000 Theobroma cacao HOM05D006598 ORTHO05D008132 2.0e-67 259.6 200 65.5
Lalb_Chr11g0062331 Lupinus albus HOM05D006598 ORTHO05D008132 7.6e-67 257.7 203 63.5
unitig_46.g17936 Utricularia gibba HOM05D006598 ORTHO05D008132 4.6e-64 248.4 177 66.7
Zm00001eb059150 Zea mays HOM05D006598 ORTHO05D008132 6.6e-63 244.6 203 58.1
Oeu049953.1 Olea europaea HOM05D006598 ORTHO05D008132 3.6e-61 238.8 143 79.0
HPP92_018786 Vanilla planifolia HOM05D006598 ORTHO05D008132 7.6e-59 231.1 157 67.5
FAN20G3016 Fragaria x ananassa HOM05D006598 ORTHO05D008132 1.2e-56 223.8 128 79.7
Actinidia29823 Actinidia chinensis HOM05D006598 ORTHO05D008132 4.8e-53 211.8 158 67.1
SEGI_39292 Sequoiadendron giganteum HOM05D006598 ORTHO05D008132 3.1e-52 209.1 205 54.6
CDE06G0448 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 3.3e-46 189.1 167 58.7
AagrBONN_evm.TU.Sc2ySwM_228.3129 Anthoceros agrestis HOM05D006598 ORTHO05D008132 4.8e-45 185.3 200 48.0
Pp3c8_2950 Physcomitrium patens HOM05D006598 ORTHO05D008132 1.4e-44 183.7 200 48.0
Pp3c4_6590 Physcomitrium patens HOM05D006598 ORTHO05D008132 2.9e-42 176.0 200 45.0
MD15G1027400 Malus domestica HOM05D006598 ORTHO05D008132 9.6e-38 161.0 86 81.4
Pp3c12_23400 Physcomitrium patens HOM05D006598 ORTHO05D008132 4.9e-34 148.7 197 42.1
HPP92_018704 Vanilla planifolia HOM05D006598 ORTHO05D008132 1.9e-33 146.7 128 56.2
Nitab4.5_0000457g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 2.8e-29 132.9 72 88.9
AUR62039547 Chenopodium quinoa HOM05D006598 ORTHO05D008132 5.0e-26 122.1 117 55.6
HanXRQChr16g0508491 Helianthus annuus HOM05D006598 ORTHO05D008132 5.9e-19 98.6 78 59.0
Nn5g29606 Nelumbo nucifera HOM05D006598 ORTHO05D008132 1.7e-18 97.1 84 54.8
MCO09G151 Micromonas commoda HOM05D006598 ORTHO05D008132 8.5e-10 68.2 107 39.3
CBR_g22328 Chara braunii HOM05D006598 ORTHO05D008132 2.5e-09 66.6 163 29.4
HanXRQChr09g0268921 Helianthus annuus HOM05D006598 ORTHO05D008132 3.3e-06 56.2 43 55.8


User provided reference genes

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