Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001090g0130 Nicotiana tabacum HOM05D006115 ORTHO05D007528 1.7e-83 312.8 172 100.0
Nitab4.5_0005380g0050 Nicotiana tabacum HOM05D006115 ORTHO05D007528 5.6e-79 297.7 176 94.3
Peaxi162Scf00610g00313 Petunia axillaris HOM05D006115 ORTHO05D007528 4.7e-70 268.1 173 83.8
PGSC0003DMG400018360 Solanum tuberosum HOM05D006115 ORTHO05D007528 5.2e-69 264.6 173 85.0
Sopen07g028230 Solanum pennellii HOM05D006115 ORTHO05D007528 1.2e-68 263.5 173 84.4
Solyc07g054290.1 Solanum lycopersicum HOM05D006115 ORTHO05D007528 7.6e-68 260.8 173 84.4
Peaxi162Scf00132g00062 Petunia axillaris HOM05D006115 ORTHO05D007528 1.7e-67 259.6 174 80.5
Oeu029929.1 Olea europaea HOM05D006115 ORTHO05D007528 3.8e-59 231.9 172 70.9
Cfa014568 Carpinus fangiana HOM05D006115 ORTHO05D007528 4.9e-59 231.5 172 72.7
Cc05_g06750 Coffea canephora HOM05D006115 ORTHO05D007528 2.7e-57 225.7 177 71.8
Hma1.2p1_0875F.1_g231400 Hydrangea macrophylla HOM05D006115 ORTHO05D007528 1.5e-55 219.9 177 69.5
PGR142G3842 Punica granatum HOM05D006115 ORTHO05D007528 3.3e-55 218.8 185 70.3
Aqoxy4G01223 Aquilegia oxysepala HOM05D006115 ORTHO05D007528 4.3e-55 218.4 175 69.7
Oeu040003.1 Olea europaea HOM05D006115 ORTHO05D007528 2.8e-54 215.7 172 69.2
Haze_13113 Corylus avellana HOM05D006115 ORTHO05D007528 1.1e-53 213.8 172 68.6
DCAR_019192 Daucus carota HOM05D006115 ORTHO05D007528 1.4e-53 213.4 174 69.5
Dinv03833 Davidia involucrata HOM05D006115 ORTHO05D007528 2.4e-53 212.6 166 74.7
Potri.005G206200 Populus trichocarpa HOM05D006115 ORTHO05D007528 6.9e-53 211.1 177 68.4
FvH4_6g45050 Fragaria vesca HOM05D006115 ORTHO05D007528 2.0e-52 209.5 174 68.4
FAN14G2522 Fragaria x ananassa HOM05D006115 ORTHO05D007528 2.0e-52 209.5 174 68.4
QL08p037826 Quercus lobata HOM05D006115 ORTHO05D007528 2.0e-52 209.5 180 66.1
Medtr2g090200 Medicago truncatula HOM05D006115 ORTHO05D007528 2.6e-52 209.1 172 66.3
PSO210G0967 Papaver somniferum HOM05D006115 ORTHO05D007528 2.6e-52 209.1 180 63.9
CSS0015532 Camellia sinensis var. sinensis HOM05D006115 ORTHO05D007528 4.5e-52 208.4 176 68.8
CSS0031699 Camellia sinensis var. sinensis HOM05D006115 ORTHO05D007528 4.5e-52 208.4 176 68.8
Nn1g03988 Nelumbo nucifera HOM05D006115 ORTHO05D007528 4.5e-52 208.4 177 66.1
ClCG02G001140 Citrullus lanatus HOM05D006115 ORTHO05D007528 5.8e-52 208.0 174 68.4
PSO832G3416 Papaver somniferum HOM05D006115 ORTHO05D007528 5.8e-52 208.0 180 63.3
CANSAT64G2665 Cannabis sativa HOM05D006115 ORTHO05D007528 9.9e-52 207.2 177 68.4
MSTRG.12305 Avicennia marina HOM05D006115 ORTHO05D007528 1.3e-51 206.8 175 69.1
CiPaw.04G123900 Carya illinoinensis HOM05D006115 ORTHO05D007528 1.3e-51 206.8 174 67.8
GSVIVG01030552001 Vitis vinifera HOM05D006115 ORTHO05D007528 1.3e-51 206.8 173 67.1
Rhsim06G0148500 Rhododendron simsii HOM05D006115 ORTHO05D007528 1.7e-51 206.5 168 69.6
Sabra05G0156800 Salix brachista HOM05D006115 ORTHO05D007528 1.7e-51 206.5 179 68.2
CsaV3_7G004300 Cucumis sativus L. HOM05D006115 ORTHO05D007528 2.2e-51 206.1 174 66.7
Lj3g0001000 Lotus japonicus HOM05D006115 ORTHO05D007528 3.8e-51 205.3 175 64.6
MBI02_g19258_MAGBIO Magnolia biondii HOM05D006115 ORTHO05D007528 3.8e-51 205.3 176 67.0
MSTRG.14200 Avicennia marina HOM05D006115 ORTHO05D007528 6.4e-51 204.5 176 68.8
Lalb_Chr14g0366761 Lupinus albus HOM05D006115 ORTHO05D007528 6.4e-51 204.5 172 65.1
Psat7g036720 Pisum sativum HOM05D006115 ORTHO05D007528 8.4e-51 204.1 172 65.1
MELO3C018748.2 Cucumis melo HOM05D006115 ORTHO05D007528 1.4e-50 203.4 174 66.1
Duzib132G1267 Durio zibethinus HOM05D006115 ORTHO05D007528 1.4e-50 203.4 176 68.2
FAN09G2594 Fragaria x ananassa HOM05D006115 ORTHO05D007528 1.4e-50 203.4 179 68.7
FAN02G4183 Fragaria x ananassa HOM05D006115 ORTHO05D007528 1.9e-50 203.0 179 68.7
Phvul.005G105900 Phaseolus vulgaris HOM05D006115 ORTHO05D007528 1.9e-50 203.0 174 64.4
Migut.H01055 Erythranthe guttata HOM05D006115 ORTHO05D007528 2.4e-50 202.6 182 65.4
Lalb_Chr24g0399841 Lupinus albus HOM05D006115 ORTHO05D007528 2.4e-50 202.6 176 65.9
Eucgr.K00947 Eucalyptus grandis HOM05D006115 ORTHO05D007528 4.2e-50 201.8 179 67.0
Potri.002G056300 Populus trichocarpa HOM05D006115 ORTHO05D007528 4.2e-50 201.8 178 64.6
COL.COLO4_35403 Corchorus olitorius HOM05D006115 ORTHO05D007528 5.4e-50 201.4 176 67.0
RcHm_v2.0_Chr2g0162381 Rosa chinensis HOM05D006115 ORTHO05D007528 7.1e-50 201.1 177 67.2
HanXRQChr17g0542591 Helianthus annuus HOM05D006115 ORTHO05D007528 9.3e-50 200.7 173 67.6
Sabra02G0045600 Salix brachista HOM05D006115 ORTHO05D007528 1.2e-49 200.3 178 65.2
Lsat_1_v5_gn_3_39480 Lactuca sativa HOM05D006115 ORTHO05D007528 3.5e-49 198.7 174 66.7
MD17G1079700 Malus domestica HOM05D006115 ORTHO05D007528 7.9e-49 197.6 178 64.6
Manes.08G098700 Manihot esculenta HOM05D006115 ORTHO05D007528 1.3e-48 196.8 175 65.1
TWI75G0783 Tripterygium wilfordii HOM05D006115 ORTHO05D007528 1.8e-48 196.4 179 64.2
Prupe.3G235100 Prunus persica HOM05D006115 ORTHO05D007528 2.3e-48 196.1 177 65.0
SGA_v2.0_scaffold356G49787 Striga asiatica HOM05D006115 ORTHO05D007528 3.9e-48 195.3 170 65.3
Sed0009578 Sechium edule HOM05D006115 ORTHO05D007528 5.1e-48 194.9 173 65.9
MD09G1090500 Malus domestica HOM05D006115 ORTHO05D007528 8.7e-48 194.1 178 64.0
Sed0024793 Sechium edule HOM05D006115 ORTHO05D007528 8.7e-48 194.1 174 64.9
VMungo1080G1219 Vigna mungo HOM05D006115 ORTHO05D007528 3.3e-47 192.2 175 62.9
unitig_26.g9943 Utricularia gibba HOM05D006115 ORTHO05D007528 5.6e-47 191.4 180 62.2
unitig_749.g13954 Utricularia gibba HOM05D006115 ORTHO05D007528 7.4e-47 191.0 178 60.7
Thecc.02G175700 Theobroma cacao HOM05D006115 ORTHO05D007528 1.6e-46 189.9 174 64.9
FAN05G1351 Fragaria x ananassa HOM05D006115 ORTHO05D007528 2.8e-46 189.1 174 64.9
Gohir.A12G137300 Gossypium hirsutum HOM05D006115 ORTHO05D007528 3.7e-46 188.7 177 64.4
Ciclev10016927m.g Citrus clementina HOM05D006115 ORTHO05D007528 4.8e-46 188.3 175 61.7
CDE05G3372 Ceratophyllum demersum HOM05D006115 ORTHO05D007528 8.1e-46 187.6 183 60.7
TWI18G1016 Tripterygium wilfordii HOM05D006115 ORTHO05D007528 1.4e-45 186.8 176 63.1
Duzib248G0317 Durio zibethinus HOM05D006115 ORTHO05D007528 1.8e-45 186.4 177 63.3
Gohir.D12G141300 Gossypium hirsutum HOM05D006115 ORTHO05D007528 1.8e-45 186.4 174 63.2
Gorai.008G152600 Gossypium raimondii HOM05D006115 ORTHO05D007528 2.4e-45 186.0 174 63.2
AUR62028441 Chenopodium quinoa HOM05D006115 ORTHO05D007528 4.0e-45 185.3 182 61.0
TPR.G35547 Trifolium pratense HOM05D006115 ORTHO05D007528 6.9e-45 184.5 176 60.8
Gohir.A01G015900 Gossypium hirsutum HOM05D006115 ORTHO05D007528 1.2e-44 183.7 177 63.3
Lj1P733T48 Lonicera japonica HOM05D006115 ORTHO05D007528 1.2e-44 183.7 129 75.2
Lj8P115T48 Lonicera japonica HOM05D006115 ORTHO05D007528 1.5e-44 183.3 115 80.0
AUR62041946 Chenopodium quinoa HOM05D006115 ORTHO05D007528 2.0e-44 183.0 183 60.1
ECA246G1074 Erigeron canadensis HOM05D006115 ORTHO05D007528 2.0e-44 183.0 173 63.0
Glyma.12G202500 Glycine max HOM05D006115 ORTHO05D007528 2.0e-44 183.0 179 60.9
Actinidia09875 Actinidia chinensis HOM05D006115 ORTHO05D007528 2.6e-44 182.6 129 76.7
Aa31LG1G20930 Aethionema arabicum HOM05D006115 ORTHO05D007528 3.4e-44 182.2 178 62.4
THA.LOC104827374 Tarenaya hassleriana HOM05D006115 ORTHO05D007528 3.4e-44 182.2 132 72.7
AT1G03600 Arabidopsis thaliana HOM05D006115 ORTHO05D007528 4.5e-44 181.8 172 64.0
BolC8t46868H Brassica oleracea HOM05D006115 ORTHO05D007528 5.8e-44 181.4 176 63.6
BraA08t35627Z Brassica rapa HOM05D006115 ORTHO05D007528 7.6e-44 181.0 178 63.5
Atru.chr6.3034 Acer truncatum HOM05D006115 ORTHO05D007528 9.9e-44 180.6 184 60.3
Ah.08g220260 Amaranthus hybridus HOM05D006115 ORTHO05D007528 1.7e-43 179.9 178 61.2
BcaB02g06915 Brassica carinata HOM05D006115 ORTHO05D007528 1.7e-43 179.9 175 63.4
Sp1g02510 Schrenkiella parvula HOM05D006115 ORTHO05D007528 2.2e-43 179.5 156 66.7
AL1G13100 Arabidopsis lyrata HOM05D006115 ORTHO05D007528 3.8e-43 178.7 174 63.8
A10p02120 Brassica napus HOM05D006115 ORTHO05D007528 3.8e-43 178.7 180 63.3
CARHR002940 Cardamine hirsuta HOM05D006115 ORTHO05D007528 3.8e-43 178.7 179 62.6
Gorai.002G017600 Gossypium raimondii HOM05D006115 ORTHO05D007528 3.8e-43 178.7 177 61.0
BcaC05g24519 Brassica carinata HOM05D006115 ORTHO05D007528 6.4e-43 177.9 174 62.6
C05p02030 Brassica napus HOM05D006115 ORTHO05D007528 6.4e-43 177.9 174 62.6
BcaC07g36953 Brassica carinata HOM05D006115 ORTHO05D007528 8.4e-43 177.6 171 62.0
C08p00700 Brassica napus HOM05D006115 ORTHO05D007528 8.4e-43 177.6 171 62.0
Glyma.13G299200 Glycine max HOM05D006115 ORTHO05D007528 8.4e-43 177.6 172 60.5
BolC5t28981H Brassica oleracea HOM05D006115 ORTHO05D007528 1.1e-42 177.2 180 61.7
Gohir.D01G015900 Gossypium hirsutum HOM05D006115 ORTHO05D007528 1.4e-42 176.8 177 60.5
A08p37300 Brassica napus HOM05D006115 ORTHO05D007528 1.9e-42 176.4 177 61.6
Carub.0001s0272 Capsella rubella HOM05D006115 ORTHO05D007528 2.4e-42 176.0 174 62.1
Thhalv10008901m.g Eutrema salsugineum HOM05D006115 ORTHO05D007528 2.4e-42 176.0 178 60.7
HPP92_017628 Vanilla planifolia HOM05D006115 ORTHO05D007528 9.3e-42 174.1 153 64.7
Zm00001eb015950 Zea mays HOM05D006115 ORTHO05D007528 2.1e-41 172.9 138 70.3
Zm00001eb395230 Zea mays HOM05D006115 ORTHO05D007528 2.1e-41 172.9 136 69.1
THA.LOC104801178 Tarenaya hassleriana HOM05D006115 ORTHO05D007528 3.5e-41 172.2 118 75.4
Duzib052G1052 Durio zibethinus HOM05D006115 ORTHO05D007528 1.8e-40 169.9 164 62.2
BraA10t42481Z Brassica rapa HOM05D006115 ORTHO05D007528 1.1e-39 167.2 176 58.5
Sc12g0002830 Simmondsia chinensis HOM05D006115 ORTHO05D007528 9.6e-39 164.1 103 78.6
Os03g0333400 Oryza sativa ssp. japonica HOM05D006115 ORTHO05D007528 4.8e-38 161.8 164 58.5
Actinidia11067 Actinidia chinensis HOM05D006115 ORTHO05D007528 2.1e-33 146.4 138 63.8
CDE05G0569 Ceratophyllum demersum HOM05D006115 ORTHO05D007528 5.1e-32 141.7 144 56.9
SEGI_04908 Sequoiadendron giganteum HOM05D006115 ORTHO05D007528 5.1e-32 141.7 157 49.7
Ca_01513_v3 Cicer arietinum L. HOM05D006115 ORTHO05D007528 2.8e-30 136.0 85 75.3
Pp3c9_26020 Physcomitrium patens HOM05D006115 ORTHO05D007528 1.4e-29 133.7 167 48.5
SMO364G0930 Selaginella moellendorffii HOM05D006115 ORTHO05D007528 1.8e-29 133.3 137 51.8
AagrBONN_evm.TU.Sc2ySwM_228.954 Anthoceros agrestis HOM05D006115 ORTHO05D007528 1.5e-28 130.2 143 51.0
Mapoly0049s0056 Marchantia polymorpha HOM05D006115 ORTHO05D007528 5.9e-28 128.3 171 46.2
TAR627G0228 Trochodendron aralioides HOM05D006115 ORTHO05D007528 1.1e-26 124.0 129 57.4
CBR_g50764 Chara braunii HOM05D006115 ORTHO05D007528 1.1e-23 114.0 177 44.1
Cre05.g243800 Chlamydomonas reinhardtii HOM05D006115 ORTHO05D007528 1.5e-20 103.6 170 41.8
MCO14G469 Micromonas commoda HOM05D006115 ORTHO05D007528 4.5e-20 102.1 142 43.0
ATR0693G305 Amborella trichopoda HOM05D006115 ORTHO05D007528 1.1e-18 97.4 129 54.3
Dinv23684 Davidia involucrata HOM05D006115 ORTHO05D007528 1.2e-17 94.0 170 43.5
Ciclev10005922m.g Citrus clementina HOM05D007072 ORTHO05D008841 3.3e-07 59.3 98 28.6
FAN22G0737 Fragaria x ananassa HOM05D007072 ORTHO05D008841 1.7e-06 57.0 100 28.0
Gorai.011G195700 Gossypium raimondii HOM05D007072 ORTHO05D008841 2.8e-06 56.2 98 28.6
Gohir.D10G174900 Gossypium hirsutum HOM05D007072 ORTHO05D008841 3.7e-06 55.8 98 27.6
Carub.0001s0473 Capsella rubella HOM05D007072 ORTHO05D008841 4.8e-06 55.5 98 28.6
FvH4_4g15520 Fragaria vesca HOM05D007072 ORTHO05D008841 4.8e-06 55.5 98 27.6
FAN12G0870 Fragaria x ananassa HOM05D007072 ORTHO05D008841 4.8e-06 55.5 98 27.6
FAN07G0953 Fragaria x ananassa HOM05D007072 ORTHO05D008841 6.3e-06 55.1 98 27.6
Gohir.A10G168700 Gossypium hirsutum HOM05D007072 ORTHO05D008841 6.3e-06 55.1 98 27.6


User provided reference genes

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