Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001088g0110 Nicotiana tabacum HOM05D000371 ORTHO05D023241 3.3e-21 104.8 50 100.0
Nitab4.5_0001650g0040 Nicotiana tabacum HOM05D000371 ORTHO05D006177 1.8e-19 99.0 48 97.9
Nitab4.5_0006562g0050 Nicotiana tabacum HOM05D000371 ORTHO05D006177 4.0e-19 97.8 48 95.8
Solyc11g011420.3 Solanum lycopersicum HOM05D000371 ORTHO05D006177 2.0e-18 95.5 48 91.7
Sopen11g006220 Solanum pennellii HOM05D000371 ORTHO05D006177 3.4e-18 94.7 48 91.7
CAN.G222.59 Capsicum annuum HOM05D000371 ORTHO05D006177 4.5e-18 94.4 48 91.7
TWI74G1022 Tripterygium wilfordii HOM05D000371 ORTHO05D006177 1.1e-16 89.7 48 83.3
Cpa.g.sc56.67 Carica papaya HOM05D000371 ORTHO05D006177 1.9e-16 89.0 48 81.2
ClCG04G007520 Citrullus lanatus HOM05D000371 ORTHO05D006177 3.2e-16 88.2 48 79.2
Hma1.2p1_0671F.1_g200670 Hydrangea macrophylla HOM05D000371 ORTHO05D006177 3.2e-16 88.2 48 81.2
COL.COLO4_14682 Corchorus olitorius HOM05D000371 ORTHO05D006177 7.1e-16 87.0 48 79.2
DCAR_028802 Daucus carota HOM05D000371 ORTHO05D006177 7.1e-16 87.0 48 79.2
BcaB02g08493 Brassica carinata HOM05D000371 ORTHO05D006177 9.3e-16 86.7 48 83.3
GSVIVG01034052001 Vitis vinifera HOM05D000371 ORTHO05D006177 9.3e-16 86.7 48 81.2
CSS0030871 Camellia sinensis var. sinensis HOM05D000371 ORTHO05D006177 1.2e-15 86.3 48 77.1
CSS0040865 Camellia sinensis var. sinensis HOM05D000371 ORTHO05D006177 1.2e-15 86.3 48 77.1
Cc00_g16740 Coffea canephora HOM05D000371 ORTHO05D006177 1.2e-15 86.3 48 79.2
CsaV3_4G025730 Cucumis sativus L. HOM05D000371 ORTHO05D006177 1.2e-15 86.3 48 77.1
Thhalv10010196m.g Eutrema salsugineum HOM05D000371 ORTHO05D006177 1.2e-15 86.3 48 81.2
Gohir.A09G161700 Gossypium hirsutum HOM05D000371 ORTHO05D006177 1.2e-15 86.3 48 79.2
Gohir.D09G157300 Gossypium hirsutum HOM05D000371 ORTHO05D006177 1.2e-15 86.3 48 79.2
Gorai.006G178900 Gossypium raimondii HOM05D000371 ORTHO05D006177 1.2e-15 86.3 48 79.2
PGR031G1276 Punica granatum HOM05D000371 ORTHO05D006177 1.2e-15 86.3 48 79.2
Lalb_Chr07g0193201 Lupinus albus HOM05D000371 ORTHO05D006177 1.6e-15 85.9 48 77.1
BraA04t16273Z Brassica rapa HOM05D000371 ORTHO05D006177 2.1e-15 85.5 48 81.2
Ciclev10011305m.g Citrus clementina HOM05D000371 ORTHO05D006177 2.1e-15 85.5 48 79.2
MELO3C003198.2 Cucumis melo HOM05D000371 ORTHO05D006177 2.7e-15 85.1 48 75.0
Aa31LG10G8800 Aethionema arabicum HOM05D000371 ORTHO05D006177 3.5e-15 84.7 48 81.2
BcaC08g44659 Brassica carinata HOM05D000371 ORTHO05D006177 3.5e-15 84.7 48 79.2
C06p21810 Brassica napus HOM05D000371 ORTHO05D006177 3.5e-15 84.7 48 79.2
Cfa017293 Carpinus fangiana HOM05D000371 ORTHO05D006177 3.5e-15 84.7 48 79.2
Haze_20900 Corylus avellana HOM05D000371 ORTHO05D006177 3.5e-15 84.7 48 79.2
SGA_v2.0_scaffold85G26809 Striga asiatica HOM05D000371 ORTHO05D006177 3.5e-15 84.7 48 72.9
Duzib093G0786 Durio zibethinus HOM05D000371 ORTHO05D006177 4.6e-15 84.3 48 79.2
HanXRQChr06g0176681 Helianthus annuus HOM05D000371 ORTHO05D006177 4.6e-15 84.3 47 76.6
Psat7g241000 Pisum sativum HOM05D000371 ORTHO05D006177 4.6e-15 84.3 48 77.1
Potri.016G105100 Populus trichocarpa HOM05D000371 ORTHO05D006177 4.6e-15 84.3 48 77.1
SalBow8G2887 Salvia bowleyana HOM05D000371 ORTHO05D006177 4.6e-15 84.3 46 78.3
THA.LOC104806536 Tarenaya hassleriana HOM05D000371 ORTHO05D006177 4.6e-15 84.3 48 79.2
AL5G35010 Arabidopsis lyrata HOM05D000371 ORTHO05D006177 6.0e-15 84.0 47 80.9
AT3G54010 Arabidopsis thaliana HOM05D000371 ORTHO05D006177 6.0e-15 84.0 47 80.9
Thecc.05G027800 Theobroma cacao HOM05D000371 ORTHO05D006177 6.0e-15 84.0 48 75.0
A04p05770 Brassica napus HOM05D002554 ORTHO05D006177 7.9e-15 83.6 48 79.2
CARHR163910 Cardamine hirsuta HOM05D000371 ORTHO05D006177 7.9e-15 83.6 47 78.7
CiPaw.10G150300 Carya illinoinensis HOM05D000371 ORTHO05D006177 7.9e-15 83.6 48 75.0
RcHm_v2.0_Chr3g0464491 Rosa chinensis HOM05D000371 ORTHO05D006177 7.9e-15 83.6 48 77.1
arahy.Tifrunner.gnm1.ann1.23E1K9 Arachis hypogaea HOM05D000371 ORTHO05D006177 1.0e-14 83.2 48 79.2
HanXRQChr08g0229871 Helianthus annuus HOM05D000371 ORTHO05D023241 1.0e-14 83.2 48 72.9
Sabra16G0104300 Salix brachista HOM05D000371 ORTHO05D006177 1.0e-14 83.2 48 75.0
arahy.Tifrunner.gnm1.ann1.YWW12F Arachis hypogaea HOM05D000371 ORTHO05D006177 1.3e-14 82.8 48 77.1
Duzib106G1179 Durio zibethinus HOM05D000371 ORTHO05D006177 1.3e-14 82.8 48 79.2
Glyma.01G106600 Glycine max HOM05D000371 ORTHO05D006177 1.3e-14 82.8 48 70.8
Glyma.03G073714 Glycine max HOM05D000371 ORTHO05D006177 1.3e-14 82.8 48 70.8
Manes.15G172300 Manihot esculenta HOM05D000371 ORTHO05D006177 1.3e-14 82.8 48 72.9
Aqoxy1G00785 Aquilegia oxysepala HOM05D000371 ORTHO05D006177 1.8e-14 82.4 48 77.1
Lj3C959T17 Lonicera japonica HOM05D000371 ORTHO05D006177 1.8e-14 82.4 48 72.9
Oeu030546.3 Olea europaea HOM05D000371 ORTHO05D006177 1.8e-14 82.4 48 72.9
Atru.chr8.2107 Acer truncatum HOM05D000371 ORTHO05D006177 2.3e-14 82.0 48 79.2
Sed0006661 Sechium edule HOM05D000371 ORTHO05D006177 2.3e-14 82.0 48 75.0
TAR369G0679 Trochodendron aralioides HOM05D000371 ORTHO05D006177 2.3e-14 82.0 50 70.0
Eucgr.C00633 Eucalyptus grandis HOM05D000371 ORTHO05D006177 3.0e-14 81.6 46 76.1
LjContig00047_ERROPOS266959g0016401 Lotus japonicus HOM05D000371 ORTHO05D006177 3.0e-14 81.6 48 72.9
Phvul.007G249700 Phaseolus vulgaris HOM05D000371 ORTHO05D006177 3.9e-14 81.3 48 68.8
Ah.04g166090 Amaranthus hybridus HOM05D000371 ORTHO05D006177 5.1e-14 80.9 48 72.9
Lsat_1_v5_gn_8_80801 Lactuca sativa HOM05D000371 ORTHO05D006177 5.1e-14 80.9 48 72.9
Nn2g15155 Nelumbo nucifera HOM05D000371 ORTHO05D006177 5.1e-14 80.9 48 72.9
QL06p037270 Quercus lobata HOM05D000371 ORTHO05D006177 5.1e-14 80.9 48 75.0
Sp5g08380 Schrenkiella parvula HOM05D000371 ORTHO05D006177 5.1e-14 80.9 45 82.2
MSTRG.5620 Avicennia marina HOM05D000371 ORTHO05D006177 6.7e-14 80.5 48 70.8
BolC6t37369H Brassica oleracea HOM05D000371 ORTHO05D006177 6.7e-14 80.5 47 76.6
Ca_03543_v3 Cicer arietinum L. HOM05D000371 ORTHO05D006177 6.7e-14 80.5 48 75.0
RcHm_v2.0_Chr3g0473301 Rosa chinensis HOM05D000371 ORTHO05D023241 6.7e-14 80.5 47 78.7
VMungo0720G2985 Vigna mungo HOM05D000371 ORTHO05D006177 6.7e-14 80.5 48 66.7
CANSAT01G2772 Cannabis sativa HOM05D000371 ORTHO05D006177 8.7e-14 80.1 48 72.9
EL10Ac4g07709 Beta vulgaris HOM05D000371 ORTHO05D006177 1.1e-13 79.7 48 66.7
ECA236G3449 Erigeron canadensis HOM05D000371 ORTHO05D006177 1.5e-13 79.3 48 68.8
Hund02037 Selenicereus undatus HOM05D000371 ORTHO05D006177 1.5e-13 79.3 48 66.7
TPR.G17889 Trifolium pratense HOM05D000371 ORTHO05D006177 1.5e-13 79.3 46 73.9
RcHm_v2.0_Chr3g0473221 Rosa chinensis HOM05D000371 ORTHO05D023241 1.9e-13 79.0 47 76.6
FvH4_6g12640 Fragaria vesca HOM05D000371 ORTHO05D006177 3.3e-13 78.2 48 72.9
FAN05G2038 Fragaria x ananassa HOM05D000371 ORTHO05D006177 3.3e-13 78.2 48 70.8
FAN09G2403 Fragaria x ananassa HOM05D000371 ORTHO05D006177 3.3e-13 78.2 48 72.9
FAN14G4066 Fragaria x ananassa HOM05D000371 ORTHO05D006177 3.3e-13 78.2 48 72.9
vmacro20202 Vaccinium macrocarpon HOM05D000371 ORTHO05D006177 3.3e-13 78.2 48 70.8
TAR623G0600 Trochodendron aralioides HOM05D000371 ORTHO05D006177 4.3e-13 77.8 50 66.0
BcaC02g09108 Brassica carinata HOM05D000371 ORTHO05D006177 5.7e-13 77.4 48 75.0
C04p38550 Brassica napus HOM05D002554 ORTHO05D006177 5.7e-13 77.4 48 75.0
BolC4t25430H Brassica oleracea HOM05D002554 ORTHO05D006177 5.7e-13 77.4 48 75.0
AUR62015866 Chenopodium quinoa HOM05D000371 ORTHO05D006177 1.6e-12 75.9 48 66.7
AUR62020358 Chenopodium quinoa HOM05D000371 ORTHO05D006177 1.6e-12 75.9 48 66.7
AUR62026129 Chenopodium quinoa HOM05D000371 ORTHO05D006177 1.6e-12 75.9 48 66.7
Prupe.6G265400 Prunus persica HOM05D000371 ORTHO05D006177 2.8e-12 75.1 48 68.8
Actinidia13813 Actinidia chinensis HOM05D000371 ORTHO05D006177 3.7e-12 74.7 48 64.6
PSO384G0158 Papaver somniferum HOM05D000371 ORTHO05D006177 3.7e-12 74.7 48 68.8
Rhsim05G0200700 Rhododendron simsii HOM05D000371 ORTHO05D006177 3.7e-12 74.7 45 73.3
MD04G1140300 Malus domestica HOM05D000371 ORTHO05D006177 4.8e-12 74.3 48 68.8
Medtr4g055500 Medicago truncatula HOM05D000371 ORTHO05D006177 6.2e-12 73.9 47 68.1
unitig_26.g9094 Utricularia gibba HOM05D000371 ORTHO05D006177 6.2e-12 73.9 48 68.8
MBI14_g02853_MAGBIO Magnolia biondii HOM05D000371 ORTHO05D006177 8.2e-12 73.6 48 66.7
MD12G1155600 Malus domestica HOM05D000371 ORTHO05D006177 8.2e-12 73.6 45 68.9
HPP92_018046 Vanilla planifolia HOM05D000371 ORTHO05D006177 8.2e-12 73.6 48 60.4
Zm00001eb017910 Zea mays HOM05D000371 ORTHO05D006177 1.8e-11 72.4 48 62.5
PSO339G3206 Papaver somniferum HOM05D000371 ORTHO05D006177 5.3e-11 70.9 48 66.7
A07p21930 Brassica napus HOM05D000371 ORTHO05D006177 6.9e-11 70.5 41 75.6
BraA07t29874Z Brassica rapa HOM05D000371 ORTHO05D006177 6.9e-11 70.5 41 75.6
Os03g0367000 Oryza sativa ssp. japonica HOM05D000371 ORTHO05D006177 9.0e-11 70.1 48 60.4
ATR0210G001 Amborella trichopoda HOM05D000371 ORTHO05D006177 2.0e-10 68.9 45 64.4
CDE04G0830 Ceratophyllum demersum HOM05D000371 ORTHO05D006177 2.0e-10 68.9 48 60.4
AagrBONN_evm.TU.Sc2ySwM_228.199 Anthoceros agrestis HOM05D000371 ORTHO05D006177 4.5e-10 67.8 45 64.4
Peaxi162Scf00562g00024 Petunia axillaris HOM05D000371 ORTHO05D006177 7.6e-10 67.0 48 75.0
SMO137G0167 Selaginella moellendorffii HOM05D000371 ORTHO05D006177 7.6e-10 67.0 48 66.7
Pp3c12_8200 Physcomitrium patens HOM05D000371 ORTHO05D006177 2.9e-09 65.1 48 58.3
Actinidia29159 Actinidia chinensis HOM05D000371 ORTHO05D023241 7.1e-08 60.5 35 74.3
Carub.0005s2060 Capsella rubella HOM05D000371 ORTHO05D006177 6.1e-07 57.4 32 78.1


User provided reference genes

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