Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001088g0020 Nicotiana tabacum HOM05D007545 ORTHO05D009579 1.9e-130 470.3 510 100.0
Nitab4.5_0001650g0170 Nicotiana tabacum HOM05D007545 ORTHO05D009579 2.9e-99 366.7 213 89.7
Nitab4.5_0004239g0030 Nicotiana tabacum HOM05D007545 ORTHO05D009579 1.8e-61 241.1 201 68.2
Nitab4.5_0010123g0020 Nicotiana tabacum HOM05D007545 ORTHO05D009579 1.2e-60 238.4 134 91.0
Nitab4.5_0001650g0140 Nicotiana tabacum HOM05D007545 ORTHO05D009579 3.8e-59 233.4 140 85.7
CAN.G222.58 Capsicum annuum HOM05D007545 ORTHO05D009579 6.1e-57 226.1 142 78.9
Oeu030299.1 Olea europaea HOM05D007545 ORTHO05D009579 2.3e-56 224.2 217 60.4
Migut.K00924 Erythranthe guttata HOM05D007545 ORTHO05D009579 1.3e-54 218.4 217 58.1
Solyc11g011410.3 Solanum lycopersicum HOM05D007545 ORTHO05D009579 3.7e-54 216.9 128 83.6
PGSC0003DMG400013237 Solanum tuberosum HOM05D007545 ORTHO05D009579 1.1e-53 215.3 128 82.8
Sopen11g006210 Solanum pennellii HOM05D007545 ORTHO05D009579 3.1e-53 213.8 128 82.8
CSS0047431 Camellia sinensis var. sinensis HOM05D007545 ORTHO05D009579 4.1e-53 213.4 217 54.4
CSS0045109 Camellia sinensis var. sinensis HOM05D007545 ORTHO05D009579 2.7e-52 210.7 216 54.2
Gohir.D08G049200 Gossypium hirsutum HOM05D007545 ORTHO05D009579 3.5e-52 210.3 217 52.5
Peaxi162Scf00562g00002 Petunia axillaris HOM05D007545 ORTHO05D009579 3.5e-52 210.3 145 73.8
SGA_v2.0_scaffold45G17151 Striga asiatica HOM05D007545 ORTHO05D009579 1.9e-50 204.5 210 53.8
Gorai.004G048700 Gossypium raimondii HOM05D007545 ORTHO05D009579 2.5e-50 204.1 217 51.2
SalBow5G0095 Salvia bowleyana HOM05D007545 ORTHO05D009579 3.6e-49 200.3 210 54.8
Prupe.3G166000 Prunus persica HOM05D007545 ORTHO05D009579 5.2e-48 196.4 219 50.7
MBI19_g08382_MAGBIO Magnolia biondii HOM05D007545 ORTHO05D009579 2.8e-46 190.7 218 50.5
Haze_14281 Corylus avellana HOM05D007545 ORTHO05D009579 5.4e-45 186.4 204 53.9
TWI77G0027 Tripterygium wilfordii HOM05D007545 ORTHO05D009579 2.7e-44 184.1 217 48.8
CiPaw.03G073600 Carya illinoinensis HOM05D007545 ORTHO05D009579 1.0e-43 182.2 201 54.2
Cfa007791 Carpinus fangiana HOM05D007545 ORTHO05D009579 1.7e-43 181.4 201 52.7
Ciclev10011347m.g Citrus clementina HOM05D007545 ORTHO05D009579 5.0e-43 179.9 216 48.6
TAR371G0190 Trochodendron aralioides HOM05D007545 ORTHO05D009579 4.3e-42 176.8 201 52.2
Hma1.2p1_0158F.1_g070060 Hydrangea macrophylla HOM05D007545 ORTHO05D009579 1.2e-41 175.3 212 50.0
Sed0004069 Sechium edule HOM05D007545 ORTHO05D009579 1.6e-41 174.9 216 46.3
MD17G1268500 Malus domestica HOM05D007545 ORTHO05D009579 2.8e-41 174.1 202 50.0
MELO3C032020.2 Cucumis melo HOM05D007545 ORTHO05D009579 3.6e-41 173.7 216 46.3
Potri.017G131400 Populus trichocarpa HOM05D007545 ORTHO05D009579 6.8e-40 169.5 215 43.7
RcHm_v2.0_Chr3g0491601 Rosa chinensis HOM05D007545 ORTHO05D009579 8.9e-40 169.1 217 47.9
Rhsim10G0178600 Rhododendron simsii HOM05D007545 ORTHO05D009579 1.5e-39 168.3 215 47.9
PSO017G5257 Papaver somniferum HOM05D007545 ORTHO05D009579 5.8e-39 166.4 216 46.8
PSO478G2209 Papaver somniferum HOM05D007545 ORTHO05D009579 4.9e-38 163.3 217 46.5
Lsat_1_v5_gn_2_68461 Lactuca sativa HOM05D007545 ORTHO05D009579 6.4e-38 162.9 223 45.7
QL08p020033 Quercus lobata HOM05D007545 ORTHO05D009579 1.9e-37 161.4 213 46.0
GSVIVG01030674001 Vitis vinifera HOM05D007545 ORTHO05D009579 1.9e-37 161.4 204 47.5
HanXRQChr14g0457331 Helianthus annuus HOM05D007545 ORTHO05D009579 7.0e-37 159.5 217 45.6
Sc14g0006910 Simmondsia chinensis HOM05D007545 ORTHO05D009579 7.0e-37 159.5 217 42.9
Manes.01G119900 Manihot esculenta HOM05D007545 ORTHO05D009579 1.6e-36 158.3 215 42.8
Atru.chr1.1983 Acer truncatum HOM05D007545 ORTHO05D009579 2.0e-36 157.9 228 42.1
Hund13089 Selenicereus undatus HOM05D007545 ORTHO05D009579 3.5e-36 157.1 217 44.2
BraA06t23847Z Brassica rapa HOM05D007545 ORTHO05D009579 1.3e-35 155.2 218 41.7
Phvul.008G237700 Phaseolus vulgaris HOM05D007545 ORTHO05D009579 1.3e-35 155.2 198 46.0
FAN26G0753 Fragaria x ananassa HOM05D007545 ORTHO05D009579 1.7e-35 154.8 218 44.0
FAN19G0914 Fragaria x ananassa HOM05D007545 ORTHO05D009579 3.0e-35 154.1 217 43.8
Thhalv10007116m.g Eutrema salsugineum HOM05D007545 ORTHO05D009579 6.6e-35 152.9 225 41.8
PGR004G2599 Punica granatum HOM05D007545 ORTHO05D009579 1.1e-34 152.1 232 44.0
A06p06360 Brassica napus HOM05D007545 ORTHO05D009579 1.5e-34 151.8 218 41.7
TPR.G23654 Trifolium pratense HOM05D007545 ORTHO05D009579 2.5e-34 151.0 228 42.1
VMungo0647G0528 Vigna mungo HOM05D007545 ORTHO05D009579 3.3e-34 150.6 212 42.5
Lalb_Chr10g0104281 Lupinus albus HOM05D007545 ORTHO05D009579 4.3e-34 150.2 217 44.2
C05p07760 Brassica napus HOM05D007545 ORTHO05D009579 5.6e-34 149.8 225 40.9
BolC5t29527H Brassica oleracea HOM05D007545 ORTHO05D009579 5.6e-34 149.8 225 40.9
CANSAT64G1149 Cannabis sativa HOM05D007545 ORTHO05D009579 2.1e-33 147.9 210 46.7
Sp1g08270 Schrenkiella parvula HOM05D001024 ORTHO05D009579 2.1e-33 147.9 197 42.6
Aqoxy3G04069 Aquilegia oxysepala HOM05D007545 ORTHO05D009579 2.8e-33 147.5 192 47.4
Glyma.02G243500 Glycine max HOM05D007545 ORTHO05D009579 2.8e-33 147.5 201 44.3
Cpa.g.sc340.2 Carica papaya HOM05D007545 ORTHO05D009579 3.6e-33 147.1 215 43.3
Sed0020460 Sechium edule HOM05D007545 ORTHO05D009579 4.7e-33 146.7 217 42.9
LjContig00141g0003453 Lotus japonicus HOM05D007545 ORTHO05D009579 6.2e-33 146.4 226 42.9
THA.LOC104805633 Tarenaya hassleriana HOM05D007545 ORTHO05D009579 6.2e-33 146.4 197 42.6
AL1G20230 Arabidopsis lyrata HOM05D007545 ORTHO05D009579 1.1e-32 145.6 225 39.6
Medtr5g077930 Medicago truncatula HOM05D007545 ORTHO05D009579 1.4e-32 145.2 225 41.3
CARHR009650 Cardamine hirsuta HOM05D007545 ORTHO05D009579 4.0e-32 143.7 225 39.6
Actinidia06485 Actinidia chinensis HOM05D007545 ORTHO05D009579 5.2e-32 143.3 142 52.8
Aa31LG1G5330 Aethionema arabicum HOM05D007545 ORTHO05D009579 6.8e-32 142.9 225 40.9
ATR0661G317 Amborella trichopoda HOM05D007545 ORTHO05D009579 6.8e-32 142.9 220 39.1
AT1G09680 Arabidopsis thaliana HOM05D007545 ORTHO05D009579 3.4e-31 140.6 225 39.1
ECA238G0700 Erigeron canadensis HOM05D007545 ORTHO05D009579 5.8e-31 139.8 219 43.8
Eucgr.F02875 Eucalyptus grandis HOM05D007545 ORTHO05D009579 9.8e-31 139.0 219 41.1
Carub.0001s0902 Capsella rubella HOM05D007545 ORTHO05D009579 1.4e-29 135.2 225 39.1
Gohir.D11G205366 Gossypium hirsutum HOM05D007545 ORTHO05D009579 4.1e-29 133.7 151 45.7
ClCG05G010640 Citrullus lanatus HOM05D007545 ORTHO05D009579 4.3e-26 123.6 142 45.1
Lj4C259T9 Lonicera japonica HOM05D007545 ORTHO05D009579 3.6e-25 120.6 117 50.4
Nn3g18372 Nelumbo nucifera HOM05D007545 ORTHO05D009579 6.2e-25 119.8 117 48.7
Gohir.A08G039000 Gossypium hirsutum HOM05D007545 ORTHO05D009579 1.4e-24 118.6 136 46.3
QL05p016537 Quercus lobata HOM05D007545 ORTHO05D009579 1.5e-23 115.2 167 41.3
COL.COLO4_13423 Corchorus olitorius HOM05D007545 ORTHO05D009579 4.4e-23 113.6 87 55.2
Sabra17G0109500 Salix brachista HOM05D007545 ORTHO05D009579 5.8e-23 113.2 92 51.1
Ca_05835_v3 Cicer arietinum L. HOM05D007545 ORTHO05D009579 1.0e-19 102.4 121 40.5
Psat2g047200 Pisum sativum HOM05D007545 ORTHO05D009579 3.9e-19 100.5 144 36.8
Nitab4.5_0005124g0010 Nicotiana tabacum HOM05D007545 ORTHO05D009579 5.1e-19 100.1 49 93.9
ATR0753G016 Amborella trichopoda HOM05D007545 ORTHO05D009579 3.3e-18 97.4 136 39.0
CsaV3_3G017850 Cucumis sativus L. HOM05D007545 ORTHO05D009579 1.1e-13 82.4 117 47.9
SEGI_34198 Sequoiadendron giganteum HOM05D007545 ORTHO05D009579 1.2e-12 79.0 200 32.0
Zm00001eb080530 Zea mays HOM05D007545 ORTHO05D009579 1.0e-11 75.9 208 29.3
Gorai.007G220500 Gossypium raimondii HOM05D007545 ORTHO05D009579 1.1e-10 72.4 150 31.3
Nitab4.5_0009075g0010 Nicotiana tabacum HOM05D007545 ORTHO05D009579 5.6e-10 70.1 38 89.5
HPP92_026949 Vanilla planifolia HOM05D007545 ORTHO05D009579 9.6e-10 69.3 91 37.4
CANSAT21G0576 Cannabis sativa HOM05D007496 ORTHO05D009479 3.1e-08 64.3 149 25.5
FvH4_1g30171 Fragaria vesca HOM05D007545 ORTHO05D009579 4.0e-08 63.9 115 42.6
Dinv28181 Davidia involucrata HOM05D007545 ORTHO05D009579 1.2e-07 62.4 48 58.3
CSS0001323 Camellia sinensis var. sinensis HOM05D002890 ORTHO05D009847 4.9e-06 57.0 202 23.8
CAN.G113.7 Capsicum annuum HOM05D007455 ORTHO05D009431 6.4e-06 56.6 84 29.8
Zm00001eb080520 Zea mays HOM05D007545 ORTHO05D009579 8.4e-06 56.2 142 28.2


User provided reference genes

Program Settings