Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001085g0080 Nicotiana tabacum HOM05D007630 ORTHO05D009637 1.1e-139 500.0 248 100.0
Nitab4.5_0006947g0030 Nicotiana tabacum HOM05D007630 ORTHO05D009637 3.9e-134 481.5 242 98.3
CAN.G1379.16 Capsicum annuum HOM05D007630 ORTHO05D009637 1.1e-128 463.4 243 96.3
Peaxi162Scf00194g00929 Petunia axillaris HOM05D007630 ORTHO05D009637 8.8e-126 453.8 243 93.0
Sopen01g045140 Solanum pennellii HOM05D007630 ORTHO05D009637 1.7e-124 449.5 243 94.7
Solyc01g102720.3 Solanum lycopersicum HOM05D007630 ORTHO05D009637 3.7e-124 448.4 243 94.2
PGSC0003DMG400018220 Solanum tuberosum HOM05D007630 ORTHO05D009637 3.7e-124 448.4 243 94.2
Cc02_g23840 Coffea canephora HOM05D007630 ORTHO05D009637 7.0e-115 417.5 237 87.3
Phvul.003G090300 Phaseolus vulgaris HOM05D007630 ORTHO05D009637 1.2e-114 416.8 235 87.7
CSS0024546 Camellia sinensis var. sinensis HOM05D007630 ORTHO05D009637 2.6e-114 415.6 242 86.4
Glyma.07G270900 Glycine max HOM05D007630 ORTHO05D009637 7.7e-114 414.1 236 86.0
Hma1.2p1_0157F.1_g069300 Hydrangea macrophylla HOM05D007630 ORTHO05D009637 1.7e-113 412.9 234 86.3
GSVIVG01023115001 Vitis vinifera HOM05D007630 ORTHO05D009637 2.2e-113 412.5 236 86.4
Glyma.17G003000 Glycine max HOM05D007630 ORTHO05D009637 3.8e-113 411.8 242 84.7
Potri.004G231000 Populus trichocarpa HOM05D007630 ORTHO05D009637 1.1e-112 410.2 240 86.2
Actinidia17707 Actinidia chinensis HOM05D007630 ORTHO05D009637 5.5e-112 407.9 245 84.5
Lj4g0008184 Lotus japonicus HOM05D007630 ORTHO05D009637 7.2e-112 407.5 237 83.5
Ciclev10002337m.g Citrus clementina HOM05D007630 ORTHO05D009637 9.4e-112 407.1 236 86.0
Sabra01G0176100 Salix brachista HOM05D007630 ORTHO05D009637 9.4e-112 407.1 242 86.4
Actinidia11717 Actinidia chinensis HOM05D007630 ORTHO05D009637 2.7e-111 405.6 237 84.8
QL02p103828 Quercus lobata HOM05D007630 ORTHO05D009637 2.7e-111 405.6 238 84.0
Rhsim11G0114600 Rhododendron simsii HOM05D007630 ORTHO05D009637 4.7e-111 404.8 241 83.8
arahy.Tifrunner.gnm1.ann1.CDQ02R Arachis hypogaea HOM05D007630 ORTHO05D009637 2.3e-110 402.5 249 81.1
arahy.Tifrunner.gnm1.ann1.XQ55VB Arachis hypogaea HOM05D007630 ORTHO05D009637 2.3e-110 402.5 249 81.1
Manes.06G015300 Manihot esculenta HOM05D007630 ORTHO05D009637 3.0e-110 402.1 235 85.5
CSS0032395 Camellia sinensis var. sinensis HOM05D007630 ORTHO05D009637 4.0e-110 401.7 249 82.3
MSTRG.16453 Avicennia marina HOM05D007630 ORTHO05D009637 6.7e-110 401.0 236 83.9
Lj9A243T50 Lonicera japonica HOM05D007630 ORTHO05D009637 8.8e-110 400.6 234 84.6
Nn5g27111 Nelumbo nucifera HOM05D007630 ORTHO05D009637 2.6e-109 399.1 241 83.0
Psat4g001800 Pisum sativum HOM05D007630 ORTHO05D009637 3.3e-109 398.7 238 81.5
TPR.G5932 Trifolium pratense HOM05D007630 ORTHO05D009637 4.4e-109 398.3 226 85.4
TWI59G0438 Tripterygium wilfordii HOM05D007630 ORTHO05D009637 5.7e-109 397.9 225 87.1
Lalb_Chr07g0176861 Lupinus albus HOM05D007630 ORTHO05D009637 1.3e-108 396.7 232 84.9
Oeu000167.1 Olea europaea HOM05D007630 ORTHO05D009637 2.2e-108 396.0 224 87.5
Medtr4g134400 Medicago truncatula HOM05D007630 ORTHO05D009637 4.8e-108 394.8 233 82.4
vmacro01631 Vaccinium macrocarpon HOM05D007630 ORTHO05D009637 4.8e-108 394.8 232 84.5
RcHm_v2.0_Chr7g0218271 Rosa chinensis HOM05D007630 ORTHO05D009637 6.3e-108 394.4 240 82.5
Atru.chr6.70 Acer truncatum HOM05D007630 ORTHO05D009637 8.2e-108 394.0 242 84.3
Migut.B00699 Erythranthe guttata HOM05D007630 ORTHO05D009637 1.4e-107 393.3 235 81.7
DCAR_001874 Daucus carota HOM05D007630 ORTHO05D009637 2.4e-107 392.5 232 83.2
Hund29384 Selenicereus undatus HOM05D007630 ORTHO05D009637 5.3e-107 391.3 229 85.2
Hund29386 Selenicereus undatus HOM05D007630 ORTHO05D009637 5.3e-107 391.3 229 85.2
Prupe.1G587600 Prunus persica HOM05D007630 ORTHO05D009637 1.2e-106 390.2 245 80.4
Cpa.g.sc246.13 Carica papaya HOM05D007630 ORTHO05D009637 1.6e-106 389.8 238 82.4
FvH4_5g27180 Fragaria vesca HOM05D007630 ORTHO05D009637 1.6e-106 389.8 240 81.7
Haze_09954 Corylus avellana HOM05D007630 ORTHO05D009637 2.7e-106 389.0 215 90.2
Thecc.06G066000 Theobroma cacao HOM05D007630 ORTHO05D009637 3.5e-106 388.7 232 85.3
ECA236G0298 Erigeron canadensis HOM05D007630 ORTHO05D009637 5.9e-106 387.9 255 79.6
COL.COLO4_31101 Corchorus olitorius HOM05D007630 ORTHO05D009637 1.3e-105 386.7 237 82.3
AUR62040114 Chenopodium quinoa HOM05D007630 ORTHO05D009637 1.7e-105 386.3 225 86.7
FAN04G2951 Fragaria x ananassa HOM05D007630 ORTHO05D009637 1.7e-105 386.3 240 80.8
CANSAT01G1787 Cannabis sativa HOM05D007630 ORTHO05D009637 2.2e-105 386.0 243 79.8
HanXRQChr16g0531021 Helianthus annuus HOM05D007630 ORTHO05D009637 1.9e-104 382.9 238 80.7
FAN18G2712 Fragaria x ananassa HOM05D007630 ORTHO05D009637 5.5e-104 381.3 236 81.8
Eucgr.G00050 Eucalyptus grandis HOM05D007630 ORTHO05D009637 3.6e-103 378.6 226 84.1
Duzib192G0579 Durio zibethinus HOM05D007630 ORTHO05D009637 6.1e-103 377.9 226 86.3
FAN13G2616 Fragaria x ananassa HOM05D007630 ORTHO05D009637 6.1e-103 377.9 247 78.5
PGR042G3439 Punica granatum HOM05D007630 ORTHO05D009637 1.8e-102 376.3 221 83.3
MD08G1250400 Malus domestica HOM05D007630 ORTHO05D009637 3.4e-101 372.1 246 77.6
Aqoxy6G00011 Aquilegia oxysepala HOM05D007630 ORTHO05D009637 9.8e-101 370.5 235 80.4
THA.LOC104809043 Tarenaya hassleriana HOM05D007630 ORTHO05D009637 1.8e-99 366.3 236 77.1
Gohir.A05G160300 Gossypium hirsutum HOM05D007630 ORTHO05D009637 4.1e-99 365.2 242 76.9
Gorai.009G168000 Gossypium raimondii HOM05D007630 ORTHO05D009637 4.1e-99 365.2 242 76.9
VMungo1215G0090 Vigna mungo HOM05D007630 ORTHO05D009637 4.1e-99 365.2 201 90.0
Gorai.011G090500 Gossypium raimondii HOM05D007630 ORTHO05D009637 6.6e-97 357.8 234 78.2
Gohir.A10G157500 Gossypium hirsutum HOM05D007630 ORTHO05D009637 1.5e-96 356.7 234 78.2
Lsat_1_v5_gn_9_82660 Lactuca sativa HOM05D007630 ORTHO05D009637 3.6e-95 352.1 258 72.5
CDE05G2797 Ceratophyllum demersum HOM05D007630 ORTHO05D009637 3.4e-93 345.5 219 75.3
CDE05G1783 Ceratophyllum demersum HOM05D007630 ORTHO05D009637 1.7e-92 343.2 224 73.2
AUR62032498 Chenopodium quinoa HOM05D007630 ORTHO05D009637 6.3e-92 341.3 200 85.5
TAR629G1327 Trochodendron aralioides HOM05D007630 ORTHO05D009637 8.3e-92 340.9 196 83.7
AT5G49800 Arabidopsis thaliana HOM05D007630 ORTHO05D009637 1.1e-91 340.5 237 71.7
ATR1089G051 Amborella trichopoda HOM05D007630 ORTHO05D009637 4.1e-91 338.6 231 74.9
PSO170G3600 Papaver somniferum HOM05D007630 ORTHO05D009637 1.0e-89 334.0 247 70.9
Sp6g11150 Schrenkiella parvula HOM05D007630 ORTHO05D009637 1.7e-89 333.2 235 72.3
PSO017G5941 Papaver somniferum HOM05D007630 ORTHO05D009637 5.0e-89 331.6 247 71.3
AL8G23760 Arabidopsis lyrata HOM05D007630 ORTHO05D009637 6.6e-89 331.3 234 70.9
Aa31sc192G10 Aethionema arabicum HOM05D007630 ORTHO05D009637 8.6e-89 330.9 231 72.7
Oeu043594.1 Olea europaea HOM05D007630 ORTHO05D009637 3.3e-88 328.9 180 90.6
Carub.0008s0968 Capsella rubella HOM05D007630 ORTHO05D009637 5.6e-88 328.2 239 68.2
Gohir.D10G083200 Gossypium hirsutum HOM05D007630 ORTHO05D009637 3.1e-86 322.4 234 73.1
CARHR258980 Cardamine hirsuta HOM05D007630 ORTHO05D009637 1.2e-85 320.5 229 69.4
DCAR_028500 Daucus carota HOM05D007630 ORTHO05D009637 1.5e-85 320.1 198 81.8
SGA_v2.0_scaffold254G45223 Striga asiatica HOM05D007630 ORTHO05D009637 2.0e-85 319.7 230 71.3
Os11g0245500 Oryza sativa ssp. japonica HOM05D007630 ORTHO05D009637 5.8e-77 291.6 257 62.6
SEGI_35985 Sequoiadendron giganteum HOM05D007630 ORTHO05D009637 5.6e-72 275.0 230 60.0
Cfa004415 Carpinus fangiana HOM05D000089 ORTHO05D000104 7.5e-69 264.6 215 67.4
MBI06_g17062_MAGBIO Magnolia biondii HOM05D007630 ORTHO05D009637 4.7e-63 245.4 139 85.6
Dinv30982 Davidia involucrata HOM05D007630 ORTHO05D009637 8.1e-63 244.6 139 88.5
Sc03g0005590 Simmondsia chinensis HOM05D007630 ORTHO05D009637 3.4e-61 239.2 150 78.0
Mapoly0105s0042 Marchantia polymorpha HOM05D007630 ORTHO05D009637 9.9e-61 237.7 211 53.6
Gohir.D05G163000 Gossypium hirsutum HOM05D007630 ORTHO05D009637 4.9e-60 235.3 163 73.6
SMO198G0095 Selaginella moellendorffii HOM05D007630 ORTHO05D009637 2.7e-58 229.6 229 51.1
Zm00001eb168190 Zea mays HOM05D007630 ORTHO05D009637 1.6e-55 220.3 243 51.0
MD15G1445600 Malus domestica HOM05D007630 ORTHO05D009637 2.4e-30 136.7 82 79.3
SEGI_15718 Sequoiadendron giganteum HOM05D007630 ORTHO05D009637 1.1e-24 117.9 230 31.7
Dinv29656 Davidia involucrata HOM05D007630 ORTHO05D009637 2.9e-20 103.2 120 52.5
HanXRQChr09g0245071 Helianthus annuus HOM05D000066 ORTHO05D000055 2.2e-12 77.0 100 47.0


User provided reference genes

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