Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001083g0080 Nicotiana tabacum HOM05D005936 ORTHO05D007967 7.2e-170 600.5 308 100.0
Nitab4.5_0005024g0030 Nicotiana tabacum HOM05D005936 ORTHO05D007967 5.5e-162 574.3 308 96.4
Peaxi162Scf00915g00243 Petunia axillaris HOM05D005936 ORTHO05D007967 3.3e-154 548.5 308 92.9
PGSC0003DMG400014268 Solanum tuberosum HOM05D005936 ORTHO05D007967 1.8e-149 532.7 308 91.2
Solyc03g026210.4 Solanum lycopersicum HOM05D005936 ORTHO05D007967 8.6e-147 523.9 308 89.9
Oeu021758.1 Olea europaea HOM05D005936 ORTHO05D007967 3.3e-138 495.4 308 83.1
CSS0027176 Camellia sinensis var. sinensis HOM05D005936 ORTHO05D007967 2.3e-136 489.2 308 82.1
CSS0048625 Camellia sinensis var. sinensis HOM05D005936 ORTHO05D007967 2.3e-136 489.2 308 82.1
FvH4_7g29020 Fragaria vesca HOM05D005936 ORTHO05D007967 7.5e-135 484.2 308 81.8
FAN06G1408 Fragaria x ananassa HOM05D005936 ORTHO05D007967 7.5e-135 484.2 308 81.8
Cc00_g24160 Coffea canephora HOM05D005936 ORTHO05D007967 3.7e-134 481.9 309 80.9
FAN06G0122 Fragaria x ananassa HOM05D005936 ORTHO05D007967 3.7e-134 481.9 308 81.5
Potri.015G135400 Populus trichocarpa HOM05D005936 ORTHO05D007967 6.4e-134 481.1 308 79.5
CiPaw.04G067400 Carya illinoinensis HOM05D005936 ORTHO05D007967 4.1e-133 478.4 308 81.5
CANSAT21G0538 Cannabis sativa HOM05D005936 ORTHO05D007967 5.4e-133 478.0 308 80.8
Eucgr.A02812 Eucalyptus grandis HOM05D005936 ORTHO05D007967 9.2e-133 477.2 308 79.9
Cfa008280 Carpinus fangiana HOM05D005936 ORTHO05D007967 2.0e-132 476.1 308 80.8
DCAR_018171 Daucus carota HOM05D005936 ORTHO05D007967 2.0e-132 476.1 308 79.5
QL09p014981 Quercus lobata HOM05D005936 ORTHO05D007967 2.0e-132 476.1 307 81.1
FAN03G0200 Fragaria x ananassa HOM05D005936 ORTHO05D007967 3.5e-132 475.3 308 80.2
MD07G1264500 Malus domestica HOM05D005936 ORTHO05D007967 4.6e-132 474.9 309 79.3
Prupe.2G290400 Prunus persica HOM05D005936 ORTHO05D007967 4.6e-132 474.9 305 80.7
FAN03G0500 Fragaria x ananassa HOM05D005936 ORTHO05D007967 6.0e-132 474.6 308 79.9
Duzib084G0661 Durio zibethinus HOM05D005936 ORTHO05D007967 1.0e-131 473.8 308 80.2
CANSAT21G1747 Cannabis sativa HOM05D005936 ORTHO05D007967 1.3e-131 473.4 308 80.8
GSVIVG01010618001 Vitis vinifera HOM05D005936 ORTHO05D007967 2.3e-131 472.6 309 81.2
Thecc.03G170800 Theobroma cacao HOM05D005936 ORTHO05D007967 3.0e-131 472.2 309 78.6
CsaV3_3G016820 Cucumis sativus L. HOM05D005936 ORTHO05D007967 3.9e-131 471.9 308 80.2
Actinidia34080 Actinidia chinensis HOM05D005936 ORTHO05D007967 5.0e-131 471.5 308 80.5
Hma1.2p1_0270F.1_g108440 Hydrangea macrophylla HOM05D005936 ORTHO05D007967 5.0e-131 471.5 308 79.5
Gohir.D09G040700 Gossypium hirsutum HOM05D005936 ORTHO05D007967 1.1e-130 470.3 309 79.0
Gorai.006G046600 Gossypium raimondii HOM05D005936 ORTHO05D007967 1.1e-130 470.3 309 79.0
Rhsim03G0177300 Rhododendron simsii HOM05D005936 ORTHO05D007967 1.9e-130 469.5 316 78.5
ClCG05G007820 Citrullus lanatus HOM05D005936 ORTHO05D007967 2.5e-130 469.2 308 79.5
Nn1g01364 Nelumbo nucifera HOM05D005936 ORTHO05D007967 1.2e-129 466.8 310 77.1
PGR042G3346 Punica granatum HOM05D005936 ORTHO05D007967 1.6e-129 466.5 308 78.9
SalBow1G7635 Salvia bowleyana HOM05D005936 ORTHO05D007967 3.6e-129 465.3 307 78.2
HanXRQChr13g0405681 Helianthus annuus HOM05D005936 ORTHO05D007967 4.7e-129 464.9 309 78.6
Gohir.A09G039900 Gossypium hirsutum HOM05D005936 ORTHO05D007967 6.2e-129 464.5 308 77.9
vmacro06722 Vaccinium macrocarpon HOM05D005936 ORTHO05D007967 6.2e-129 464.5 308 78.2
Migut.F00375 Erythranthe guttata HOM05D005936 ORTHO05D007967 8.1e-129 464.2 278 83.8
RcHm_v2.0_Chr1g0376731 Rosa chinensis HOM05D005936 ORTHO05D007967 2.3e-128 462.6 307 78.5
TAR374G0336 Trochodendron aralioides HOM05D005936 ORTHO05D007967 6.8e-128 461.1 308 78.9
Sabra15G0147400 Salix brachista HOM05D005936 ORTHO05D007967 8.9e-128 460.7 303 77.6
Lalb_Chr21g0304951 Lupinus albus HOM05D005936 ORTHO05D007967 3.4e-127 458.8 308 78.6
Lsat_1_v5_gn_8_7461 Lactuca sativa HOM05D005936 ORTHO05D007967 7.5e-127 457.6 309 78.3
BcaC01g06163 Brassica carinata HOM05D005936 ORTHO05D007967 9.9e-127 457.2 308 75.6
BolC3t14249H Brassica oleracea HOM05D005936 ORTHO05D007967 9.9e-127 457.2 308 75.6
Carub.0008s1218 Capsella rubella HOM05D005936 ORTHO05D007967 1.3e-126 456.8 309 75.1
TPR.G17430 Trifolium pratense HOM05D005936 ORTHO05D007967 1.3e-126 456.8 308 78.6
BcaB01g04183 Brassica carinata HOM05D005936 ORTHO05D007967 1.7e-126 456.4 308 75.0
BraA03t10875Z Brassica rapa HOM05D005936 ORTHO05D007967 2.9e-126 455.7 308 75.6
AT5G52100 Arabidopsis thaliana HOM05D005936 ORTHO05D007967 3.7e-126 455.3 308 75.3
AL8G26470 Arabidopsis lyrata HOM05D005936 ORTHO05D007967 4.9e-126 454.9 308 76.0
Phvul.007G066600 Phaseolus vulgaris HOM05D005936 ORTHO05D007967 1.1e-125 453.8 309 76.7
PSO478G3778 Papaver somniferum HOM05D005936 ORTHO05D007967 1.4e-125 453.4 308 76.9
THA.LOC104811994 Tarenaya hassleriana HOM05D005936 ORTHO05D007967 1.4e-125 453.4 286 79.4
Medtr1g101400 Medicago truncatula HOM05D005936 ORTHO05D007967 3.2e-125 452.2 308 77.6
AUR62021235 Chenopodium quinoa HOM05D005936 ORTHO05D007967 4.1e-125 451.8 308 76.3
Glyma.10G238800 Glycine max HOM05D005936 ORTHO05D007967 7.1e-125 451.1 309 76.4
Sp6g14350 Schrenkiella parvula HOM05D005936 ORTHO05D007967 7.1e-125 451.1 278 81.3
SpUn0060_0040 Schrenkiella parvula HOM05D005936 ORTHO05D007967 7.1e-125 451.1 278 81.3
Ah.13g068310 Amaranthus hybridus HOM05D005936 ORTHO05D007967 1.6e-124 449.9 310 77.4
LjContig00238g0017909 Lotus japonicus HOM05D005936 ORTHO05D007967 1.6e-124 449.9 308 76.9
VMungo0720G1210 Vigna mungo HOM05D005936 ORTHO05D007967 2.7e-124 449.1 308 75.6
Aa31LG3G8470 Aethionema arabicum HOM05D005936 ORTHO05D007967 1.0e-123 447.2 287 78.7
ATR0757G004 Amborella trichopoda HOM05D005936 ORTHO05D007967 3.0e-123 445.7 291 78.0
ECA233G0165 Erigeron canadensis HOM05D005936 ORTHO05D007967 3.9e-123 445.3 272 83.1
AUR62016030 Chenopodium quinoa HOM05D005936 ORTHO05D007967 8.6e-123 444.1 316 74.4
Aqoxy7G00442 Aquilegia oxysepala HOM05D005936 ORTHO05D007967 3.3e-122 442.2 308 75.0
Ciclev10005510m.g Citrus clementina HOM05D005936 ORTHO05D007967 5.6e-122 441.4 297 77.4
arahy.Tifrunner.gnm1.ann1.UTGK89 Arachis hypogaea HOM05D005936 ORTHO05D007967 7.3e-122 441.0 309 74.4
COL.COLO4_14264 Corchorus olitorius HOM05D005936 ORTHO05D007967 3.1e-120 435.6 281 79.7
PSO782G1152 Papaver somniferum HOM05D005936 ORTHO05D007967 3.1e-120 435.6 298 76.2
A03p15850 Brassica napus HOM05D005936 ORTHO05D007967 4.0e-120 435.3 297 74.4
Hma1.2p1_0010F.1_g006890 Hydrangea macrophylla HOM05D005936 ORTHO05D007967 2.6e-119 432.6 262 84.0
EL10Ac3g05696 Beta vulgaris HOM05D005936 ORTHO05D007967 2.4e-117 426.0 309 73.1
C03p18520 Brassica napus HOM05D005936 ORTHO05D007967 1.6e-116 423.3 322 68.9
arahy.Tifrunner.gnm1.ann1.AYWY8E Arachis hypogaea HOM05D005936 ORTHO05D007967 8.7e-115 417.5 330 69.7
Os03g0118600 Oryza sativa ssp. japonica HOM05D005936 ORTHO05D007967 4.3e-114 415.2 279 72.4
Lj1C993G3 Lonicera japonica HOM05D005936 ORTHO05D007967 2.0e-111 406.4 310 72.6
MELO3C006876.2 Cucumis melo HOM05D005936 ORTHO05D007967 2.6e-111 406.0 269 79.2
Dinv28478 Davidia involucrata HOM05D005936 ORTHO05D007967 4.4e-111 405.2 272 77.6
Manes.06G143900 Manihot esculenta HOM05D005936 ORTHO05D007967 3.8e-110 402.1 301 70.4
TWI23G0201 Tripterygium wilfordii HOM05D005936 ORTHO05D007967 7.1e-109 397.9 299 71.2
MBI12_g29760_MAGBIO Magnolia biondii HOM05D005936 ORTHO05D007967 3.5e-108 395.6 308 69.2
Haze_13754 Corylus avellana HOM05D005936 ORTHO05D007967 6.0e-108 394.8 273 77.3
Psat6g200960 Pisum sativum HOM05D005936 ORTHO05D007967 3.9e-107 392.1 241 82.6
unitig_0.g2488 Utricularia gibba HOM05D005936 ORTHO05D007967 8.7e-107 391.0 303 67.3
CDE09G1316 Ceratophyllum demersum HOM05D005936 ORTHO05D007967 3.4e-103 379.0 241 79.3
Ca_10793_v3 Cicer arietinum L. HOM05D005936 ORTHO05D007967 5.8e-103 378.3 269 75.1
Sed0016287 Sechium edule HOM05D005936 ORTHO05D007967 1.3e-99 367.1 220 84.1
SEGI_11434 Sequoiadendron giganteum HOM05D005936 ORTHO05D007967 4.2e-93 345.5 276 60.9
TAR375G0526 Trochodendron aralioides HOM05D005936 ORTHO05D007967 3.0e-91 339.3 263 70.7
Actinidia32894 Actinidia chinensis HOM05D005936 ORTHO05D007967 6.7e-91 338.2 242 77.7
Thhalv10014460m.g Eutrema salsugineum HOM05D005936 ORTHO05D007967 3.7e-89 332.4 236 72.5
Pp3c21_9920 Physcomitrium patens HOM05D005936 ORTHO05D007967 9.0e-88 327.8 278 59.4
Glyma.20G155600 Glycine max HOM05D005936 ORTHO05D007967 9.7e-82 307.8 220 74.5
Mapoly0001s0282 Marchantia polymorpha HOM05D005936 ORTHO05D007967 9.7e-82 307.8 269 59.1
vmacro06720 Vaccinium macrocarpon HOM05D005936 ORTHO05D007967 2.8e-81 306.2 265 63.4
SMO367G1305 Selaginella moellendorffii HOM05D005936 ORTHO05D007967 1.5e-79 300.4 266 55.6
Hund04704 Selenicereus undatus HOM05D005936 ORTHO05D007967 5.5e-77 292.0 250 64.4
MD01G1197100 Malus domestica HOM05D005936 ORTHO05D007967 1.4e-75 287.3 327 54.1
CAN.G548.3 Capsicum annuum HOM05D005936 ORTHO05D007967 9.1e-72 274.6 164 87.8
Zm00001eb001140 Zea mays HOM05D005936 ORTHO05D007967 1.7e-70 270.4 190 70.5
CBR_g30244 Chara braunii HOM05D005936 ORTHO05D007967 3.0e-67 259.6 284 48.6
MD01G1197000 Malus domestica HOM05D005936 ORTHO05D007967 9.7e-66 254.6 287 54.0
MBI12_g45864_MAGBIO Magnolia biondii HOM05D005936 ORTHO05D007967 1.1e-64 251.1 230 62.6
MBI18_g06814_MAGBIO Magnolia biondii HOM05D005936 ORTHO05D007967 2.9e-62 243.0 244 58.2
Sopen03g005080 Solanum pennellii HOM05D005936 ORTHO05D007967 8.5e-62 241.5 165 81.8
MBI18_g40469_MAGBIO Magnolia biondii HOM05D005936 ORTHO05D007967 3.2e-61 239.6 215 62.8
MSTRG.8763 Avicennia marina HOM05D005936 ORTHO05D007967 2.6e-58 229.9 163 73.6
CARHR265020 Cardamine hirsuta HOM05D005936 ORTHO05D007967 5.9e-55 218.8 163 69.9
AagrBONN_evm.TU.Sc2ySwM_340.388 Anthoceros agrestis HOM05D003851 ORTHO05D005657 2.5e-53 213.4 192 57.8
Cpa.g.sc107.7 Carica papaya HOM05D005936 ORTHO05D007967 3.2e-53 213.0 163 71.8
Duzib205G1997 Durio zibethinus HOM05D005936 ORTHO05D007967 6.1e-52 208.8 227 55.5
Os03g0117000 Oryza sativa ssp. japonica HOM05D005936 ORTHO05D007967 3.5e-47 193.0 186 54.8
MBI09_g40772_MAGBIO Magnolia biondii HOM05D005936 ORTHO05D007967 1.7e-46 190.7 153 69.9
FAN01G1428 Fragaria x ananassa HOM05D005936 ORTHO05D007967 1.6e-44 184.1 206 55.3
MBI18_g34964_MAGBIO Magnolia biondii HOM05D005936 ORTHO05D007967 4.7e-44 182.6 153 66.0
Cpa.g.sc107.8 Carica papaya HOM05D005936 ORTHO05D007967 1.8e-43 180.6 118 74.6
MBI18_g28463_MAGBIO Magnolia biondii HOM05D005936 ORTHO05D007967 1.2e-42 177.9 154 65.6
MBI08_g23116_MAGBIO Magnolia biondii HOM05D005936 ORTHO05D007967 1.7e-38 164.1 138 66.7
MBI07_g12175_MAGBIO Magnolia biondii HOM05D005936 ORTHO05D007967 3.5e-31 139.8 157 54.8
MBI15_g15729_MAGBIO Magnolia biondii HOM05D005936 ORTHO05D007967 1.3e-17 94.7 83 63.9
RcHm_v2.0_Chr1g0376771 Rosa chinensis HOM05D005936 ORTHO05D342530 2.3e-14 84.0 134 44.0
MBI16_g19597_MAGBIO Magnolia biondii HOM05D005936 ORTHO05D007967 2.0e-10 70.9 86 46.5


User provided reference genes

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