Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001079g0120 Nicotiana tabacum HOM05D003715 ORTHO05D003958 5.6e-130 467.6 236 100.0
Nitab4.5_0009367g0020 Nicotiana tabacum HOM05D003715 ORTHO05D003958 1.3e-102 376.7 263 76.8
Sopen10g031210 Solanum pennellii HOM05D003715 ORTHO05D003958 6.7e-67 258.1 259 61.8
Solyc10g080670.2 Solanum lycopersicum HOM05D003715 ORTHO05D003958 2.0e-66 256.5 259 61.8
PGSC0003DMG400023700 Solanum tuberosum HOM05D003715 ORTHO05D003958 3.3e-58 229.2 259 58.3
Peaxi162Scf00249g00717 Petunia axillaris HOM05D003715 ORTHO05D003958 1.9e-53 213.4 261 53.3
Nitab4.5_0000658g0020 Nicotiana tabacum HOM05D003715 ORTHO05D003958 2.2e-46 189.9 291 49.1
Nitab4.5_0002769g0040 Nicotiana tabacum HOM05D003715 ORTHO05D003958 7.5e-42 174.9 264 45.8
Peaxi162Scf00463g00019 Petunia axillaris HOM05D003715 ORTHO05D003958 9.1e-40 167.9 289 44.6
Nitab4.5_0000358g0150 Nicotiana tabacum HOM05D003715 ORTHO05D003958 1.0e-35 154.5 253 45.1
Thecc.05G249800 Theobroma cacao HOM05D003715 ORTHO05D003958 5.2e-35 152.1 281 39.1
Solyc10g078590.2 Solanum lycopersicum HOM05D003715 ORTHO05D003958 8.9e-35 151.4 261 42.5
Dinv37021 Davidia involucrata HOM05D003715 ORTHO05D003958 1.2e-34 151.0 276 39.1
Sopen10g029220 Solanum pennellii HOM05D003715 ORTHO05D003958 1.5e-34 150.6 261 42.1
QL07p018445 Quercus lobata HOM05D003715 ORTHO05D003958 4.4e-34 149.1 295 37.3
PGSC0003DMG400008354 Solanum tuberosum HOM05D003715 ORTHO05D003958 1.7e-33 147.1 260 43.5
Haze_19430 Corylus avellana HOM05D003715 ORTHO05D003958 2.9e-33 146.4 292 37.0
Gorai.007G262000 Gossypium raimondii HOM05D003715 ORTHO05D003958 2.9e-33 146.4 279 37.3
Actinidia22080 Actinidia chinensis HOM05D003715 ORTHO05D003958 4.9e-33 145.6 298 39.3
Cfa001533 Carpinus fangiana HOM05D003715 ORTHO05D003958 4.9e-33 145.6 291 36.4
vmacro12564 Vaccinium macrocarpon HOM05D003715 ORTHO05D003958 1.4e-32 144.1 276 39.9
Potri.019G035600 Populus trichocarpa HOM05D003715 ORTHO05D003958 3.2e-32 142.9 293 39.2
Nitab4.5_0000394g0140 Nicotiana tabacum HOM05D003715 ORTHO05D003958 1.6e-31 140.6 277 45.1
Gohir.A11G235300 Gossypium hirsutum HOM05D003715 ORTHO05D003958 4.6e-31 139.0 277 36.8
Peaxi162Scf00003g04827 Petunia axillaris HOM05D003715 ORTHO05D003958 1.0e-30 137.9 260 41.9
Duzib106G1922 Durio zibethinus HOM05D003715 ORTHO05D003958 3.0e-30 136.3 283 35.3
Sc13g0002630 Simmondsia chinensis HOM05D003715 ORTHO05D003958 3.0e-30 136.3 280 32.5
Hund19231 Selenicereus undatus HOM05D003715 ORTHO05D003958 3.9e-30 136.0 258 38.4
Gohir.D11G246200 Gossypium hirsutum HOM05D003715 ORTHO05D003958 6.6e-30 135.2 279 36.2
MSTRG.26069 Avicennia marina HOM05D003715 ORTHO05D003958 8.6e-30 134.8 272 37.5
TAR623G0055 Trochodendron aralioides HOM05D003715 ORTHO05D003958 1.1e-29 134.4 292 34.9
Sabra13G0051000 Salix brachista HOM05D003715 ORTHO05D003958 1.5e-29 134.0 291 38.1
COL.COLO4_36085 Corchorus olitorius HOM05D003715 ORTHO05D003958 2.5e-29 133.3 273 38.1
Dinv14575 Davidia involucrata HOM05D003715 ORTHO05D003958 2.5e-29 133.3 284 36.3
VMungo0464G1653 Vigna mungo HOM05D003715 ORTHO05D003958 2.5e-29 133.3 273 33.3
Actinidia30549 Actinidia chinensis HOM05D003715 ORTHO05D003958 5.6e-29 132.1 236 41.1
Oeu024502.1 Olea europaea HOM05D003715 ORTHO05D003958 7.3e-29 131.7 276 37.3
Phvul.004G080700 Phaseolus vulgaris HOM05D003715 ORTHO05D003958 7.3e-29 131.7 270 32.6
Sabra19G0044200 Salix brachista HOM05D003715 ORTHO05D003958 1.2e-28 131.0 292 37.7
Sabra19G0047500 Salix brachista HOM05D003715 ORTHO05D003958 1.2e-28 131.0 292 37.7
TWI34G1349 Tripterygium wilfordii HOM05D003715 ORTHO05D003958 1.2e-28 131.0 292 34.9
Manes.08G145000 Manihot esculenta HOM05D003715 ORTHO05D003958 1.6e-28 130.6 181 44.8
Manes.09G140500 Manihot esculenta HOM05D003715 ORTHO05D003958 1.6e-28 130.6 184 44.6
TWI32G0411 Tripterygium wilfordii HOM05D003715 ORTHO05D003958 2.8e-28 129.8 280 33.6
CiPaw.10G001300 Carya illinoinensis HOM05D003715 ORTHO05D003958 3.6e-28 129.4 199 40.2
Glyma.16G153700 Glycine max HOM05D003715 ORTHO05D003958 4.7e-28 129.0 260 35.4
Eucgr.A02102 Eucalyptus grandis HOM05D003715 ORTHO05D003958 6.2e-28 128.6 288 34.0
Glyma.02G072500 Glycine max HOM05D003715 ORTHO05D003958 1.4e-27 127.5 262 37.4
Hma1.2p1_0152F.1_g067600 Hydrangea macrophylla HOM05D003715 ORTHO05D003958 1.4e-27 127.5 278 36.0
Oeu035703.1 Olea europaea HOM05D003715 ORTHO05D003958 1.4e-27 127.5 276 36.6
Potri.013G057200 Populus trichocarpa HOM05D003715 ORTHO05D003958 1.8e-27 127.1 293 37.2
PSO339G5928 Papaver somniferum HOM05D003715 ORTHO05D003958 6.8e-27 125.2 190 38.9
PSO384G3755 Papaver somniferum HOM05D003715 ORTHO05D003958 8.9e-27 124.8 190 40.5
Medtr6g029250 Medicago truncatula HOM05D003715 ORTHO05D003958 1.7e-25 120.6 234 36.3
TPR.G9142 Trifolium pratense HOM05D003715 ORTHO05D003958 1.7e-25 120.6 241 35.3
Ca_04486_v3 Cicer arietinum L. HOM05D003715 ORTHO05D003958 2.2e-25 120.2 243 33.7
EL10Ac3g06828 Beta vulgaris HOM05D003715 ORTHO05D003958 2.9e-25 119.8 256 35.5
Lalb_Chr02g0157161 Lupinus albus HOM05D003715 ORTHO05D003958 4.9e-25 119.0 246 33.7
Ca_08274_v3 Cicer arietinum L. HOM05D003715 ORTHO05D003958 1.1e-24 117.9 244 34.4
Aqoxy2G00514 Aquilegia oxysepala HOM05D003715 ORTHO05D003958 1.4e-24 117.5 192 41.7
CiPaw.09G002400 Carya illinoinensis HOM05D003715 ORTHO05D003958 1.4e-24 117.5 254 36.2
Lj1g0002462 Lotus japonicus HOM05D003715 ORTHO05D003958 3.2e-24 116.3 201 37.8
MBI04_g28023_MAGBIO Magnolia biondii HOM05D003715 ORTHO05D003958 5.4e-24 115.5 275 33.1
arahy.Tifrunner.gnm1.ann1.V3MY1S Arachis hypogaea HOM05D003715 ORTHO05D003958 1.2e-23 114.4 238 34.0
Psat3g088760 Pisum sativum HOM05D003715 ORTHO05D003958 1.6e-23 114.0 208 35.1
Glyma.16G040300 Glycine max HOM05D003715 ORTHO05D003958 2.7e-23 113.2 256 34.0
PSO781G0019 Papaver somniferum HOM05D003715 ORTHO05D003958 2.7e-23 113.2 256 32.8
Psat1g091040 Pisum sativum HOM05D003715 ORTHO05D003958 2.7e-23 113.2 226 33.2
MBI04_g47731_MAGBIO Magnolia biondii HOM05D003715 ORTHO05D003958 3.5e-23 112.8 180 40.6
PGR042G0616 Punica granatum HOM05D003715 ORTHO05D003958 4.6e-23 112.5 267 34.1
MELO3C008806.2 Cucumis melo HOM05D003715 ORTHO05D003958 2.3e-22 110.2 186 41.4
Cc06_g23060 Coffea canephora HOM05D003715 ORTHO05D003958 6.6e-22 108.6 155 45.8
ECA238G2879 Erigeron canadensis HOM05D003715 ORTHO05D003958 6.6e-22 108.6 278 33.5
HanXRQChr14g0438161 Helianthus annuus HOM05D003715 ORTHO05D003958 1.1e-21 107.8 280 35.0
Atru.chr2.1400 Acer truncatum HOM05D003715 ORTHO05D003958 1.5e-21 107.5 166 39.2
DCAR_019875 Daucus carota HOM05D003715 ORTHO05D003958 1.5e-21 107.5 277 32.1
Sed0021221 Sechium edule HOM05D003715 ORTHO05D003958 1.5e-21 107.5 176 40.3
Ah.13g075440 Amaranthus hybridus HOM05D006363 ORTHO05D007920 2.5e-21 106.7 190 38.4
MBI01_g25640_MAGBIO Magnolia biondii HOM05D003715 ORTHO05D003958 4.3e-21 105.9 232 34.5
Ciclev10021362m.g Citrus clementina HOM05D003715 ORTHO05D003958 5.6e-21 105.5 177 41.2
CsaV3_4G013240 Cucumis sativus L. HOM05D003715 ORTHO05D003958 5.6e-21 105.5 186 40.3
Medtr7g085790 Medicago truncatula HOM05D003715 ORTHO05D003958 5.6e-21 105.5 222 35.1
ClCG04G005350 Citrullus lanatus HOM05D003715 ORTHO05D003958 9.5e-21 104.8 194 37.6
Lalb_Chr14g0364551 Lupinus albus HOM05D003715 ORTHO05D003958 1.2e-20 104.4 233 31.3
TPR.G5870 Trifolium pratense HOM05D003715 ORTHO05D003958 1.2e-20 104.4 205 37.1
Carub.0003s0306 Capsella rubella HOM05D003715 ORTHO05D003958 4.7e-20 102.4 254 33.9
Actinidia38611 Actinidia chinensis HOM05D003715 ORTHO05D003958 8.1e-20 101.7 244 34.4
Lj1g0012553 Lotus japonicus HOM05D003715 ORTHO05D003958 8.1e-20 101.7 152 38.2
TAR369G0375 Trochodendron aralioides HOM05D003715 ORTHO05D003958 8.1e-20 101.7 259 34.4
Cpa.g.sc51.130 Carica papaya HOM05D003715 ORTHO05D003958 5.2e-19 99.0 142 42.3
vmacro09135 Vaccinium macrocarpon HOM05D003715 ORTHO05D003958 6.8e-19 98.6 234 35.5
Duzib128G0041 Durio zibethinus HOM05D003715 ORTHO05D003958 2.0e-18 97.1 262 31.7
HanXRQChr13g0397871 Helianthus annuus HOM05D003715 ORTHO05D003958 2.0e-18 97.1 256 32.0
Glyma.19G112800 Glycine max HOM05D003715 ORTHO05D003958 3.4e-18 96.3 253 33.2
Sed0002226 Sechium edule HOM05D003715 ORTHO05D003958 7.5e-18 95.1 295 30.8
TAR633G2492 Trochodendron aralioides HOM05D003715 ORTHO05D003958 7.5e-18 95.1 196 31.6
THA.LOC104820776 Tarenaya hassleriana HOM05D003715 ORTHO05D003958 1.3e-17 94.4 178 38.8
FAN26G1768 Fragaria x ananassa HOM05D003715 ORTHO05D003958 1.7e-17 94.0 279 29.4
CANSAT78G1806 Cannabis sativa HOM05D003715 ORTHO05D003958 2.2e-17 93.6 194 36.6
FvH4_1g28230 Fragaria vesca HOM05D003715 ORTHO05D003958 2.2e-17 93.6 279 29.0
Lsat_1_v5_gn_6_37461 Lactuca sativa HOM05D003715 ORTHO05D003958 2.2e-17 93.6 256 31.2
HanXRQChr02g0054571 Helianthus annuus HOM05D003715 ORTHO05D003958 4.9e-17 92.4 264 31.8
Lalb_Chr22g0359081 Lupinus albus HOM05D003715 ORTHO05D003958 4.9e-17 92.4 274 30.3
MD12G1005100 Malus domestica HOM05D003715 ORTHO05D003958 6.4e-17 92.0 277 31.0
SalBow1G3164 Salvia bowleyana HOM05D003715 ORTHO05D003958 1.1e-16 91.3 236 33.5
CSS0027479 Camellia sinensis var. sinensis HOM05D003715 ORTHO05D003958 1.9e-16 90.5 217 34.6
Thhalv10021350m.g Eutrema salsugineum HOM05D003715 ORTHO05D003958 1.9e-16 90.5 177 37.9
ECA233G0839 Erigeron canadensis HOM05D003715 ORTHO05D003958 2.4e-16 90.1 198 35.4
RcHm_v2.0_Chr3g0497011 Rosa chinensis HOM05D003715 ORTHO05D003958 2.4e-16 90.1 172 38.4
Phvul.001G111500 Phaseolus vulgaris HOM05D003715 ORTHO05D003958 3.2e-16 89.7 226 29.6
PGR142G1981 Punica granatum HOM05D003715 ORTHO05D003958 3.2e-16 89.7 283 30.4
BcaC05g30247 Brassica carinata HOM05D003715 ORTHO05D003958 4.1e-16 89.4 254 31.5
FAN23G0877 Fragaria x ananassa HOM05D003715 ORTHO05D003958 4.1e-16 89.4 277 28.9
Prupe.7G006100 Prunus persica HOM05D003715 ORTHO05D003958 4.1e-16 89.4 230 32.2
AT3G03870 Arabidopsis thaliana HOM05D003715 ORTHO05D003958 5.4e-16 89.0 191 35.6
SGA_v2.0_scaffold94G28404 Striga asiatica HOM05D003715 ORTHO05D003958 7.1e-16 88.6 250 33.2
AL3G13760 Arabidopsis lyrata HOM05D003715 ORTHO05D003958 9.2e-16 88.2 174 39.1
FAN28G3019 Fragaria x ananassa HOM05D003715 ORTHO05D003958 2.1e-15 87.0 279 28.3
Duzib106G0556 Durio zibethinus HOM05D003715 ORTHO05D003958 2.7e-15 86.7 223 30.5
Rhsim04G0091400 Rhododendron simsii HOM05D006013 ORTHO05D007383 3.5e-15 86.3 236 35.2
Nn2g12054 Nelumbo nucifera HOM05D003715 ORTHO05D003958 4.6e-15 85.9 171 35.7
Nn7g35866 Nelumbo nucifera HOM05D003715 ORTHO05D003958 7.8e-15 85.1 146 39.7
ATR0737G080 Amborella trichopoda HOM05D003715 ORTHO05D003958 3.9e-14 82.8 150 36.7
BolC1t05801H Brassica oleracea HOM05D003715 ORTHO05D003958 3.9e-14 82.8 253 32.0
Sp6g26180 Schrenkiella parvula HOM05D003715 ORTHO05D003958 5.1e-14 82.4 201 33.3
MD14G1003600 Malus domestica HOM05D003715 ORTHO05D003958 8.6e-14 81.6 211 34.6
VMungo1383G2890 Vigna mungo HOM05D003715 ORTHO05D003958 8.6e-14 81.6 204 29.4
Aqoxy1G00472 Aquilegia oxysepala HOM05D003715 ORTHO05D003958 1.1e-13 81.3 177 32.2
CARHR077990 Cardamine hirsuta HOM05D003715 ORTHO05D003958 1.1e-13 81.3 188 33.5
BcaNung05741 Brassica carinata HOM05D003715 ORTHO05D003958 1.5e-13 80.9 252 31.3
BraA05t23092Z Brassica rapa HOM05D003715 ORTHO05D003958 1.5e-13 80.9 251 31.9
Carub.0006s1642 Capsella rubella HOM05D003715 ORTHO05D003958 4.3e-13 79.3 266 33.1
Lsat_1_v5_gn_2_58261 Lactuca sativa HOM05D003715 ORTHO05D003958 4.3e-13 79.3 248 32.7
MBI04_g37012_MAGBIO Magnolia biondii HOM05D003715 ORTHO05D003958 4.3e-13 79.3 82 52.4
A05p43520 Brassica napus HOM05D003715 ORTHO05D003958 5.6e-13 79.0 149 36.9
Sp3g02840 Schrenkiella parvula HOM05D003715 ORTHO05D003958 5.6e-13 79.0 176 33.5
BcaB01g06399 Brassica carinata HOM05D003715 ORTHO05D003958 7.3e-13 78.6 252 33.7
CDE02G4343 Ceratophyllum demersum HOM05D003715 ORTHO05D003958 1.2e-12 77.8 206 30.6
Os03g0806600 Oryza sativa ssp. japonica HOM05D003715 ORTHO05D003958 3.6e-12 76.3 220 28.6
AL6G29330 Arabidopsis lyrata HOM05D003715 ORTHO05D003958 4.7e-12 75.9 274 32.5
FAN19G0160 Fragaria x ananassa HOM05D003715 ORTHO05D003958 4.7e-12 75.9 259 28.6
PSO384G3057 Papaver somniferum HOM05D003715 ORTHO05D003958 6.2e-12 75.5 134 40.3
A03p08670 Brassica napus HOM05D003715 ORTHO05D003958 8.1e-12 75.1 257 30.0
Thhalv10014292m.g Eutrema salsugineum HOM05D003715 ORTHO05D003958 8.1e-12 75.1 206 30.1
CDE05G3048 Ceratophyllum demersum HOM05D003715 ORTHO05D003958 1.1e-11 74.7 259 28.6
arahy.Tifrunner.gnm1.ann1.KTU7AY Arachis hypogaea HOM05D003715 ORTHO05D003958 1.4e-11 74.3 228 28.9
A02p04750 Brassica napus HOM05D003715 ORTHO05D003958 1.8e-11 73.9 267 26.6
BolC3t13497H Brassica oleracea HOM05D003715 ORTHO05D003958 1.8e-11 73.9 250 30.4
BcaB01g05177 Brassica carinata HOM05D003715 ORTHO05D003958 2.3e-11 73.6 250 30.4
C03p10110 Brassica napus HOM05D003715 ORTHO05D003958 2.3e-11 73.6 250 30.4
BraA03t10190Z Brassica rapa HOM05D003715 ORTHO05D003958 2.3e-11 73.6 250 30.4
BcaC05g29901 Brassica carinata HOM05D003715 ORTHO05D003958 4.0e-11 72.8 172 32.0
BolC5t34973H Brassica oleracea HOM05D003715 ORTHO05D003958 4.0e-11 72.8 172 32.0
Eucgr.K01502 Eucalyptus grandis HOM05D003715 ORTHO05D003958 6.8e-11 72.0 258 31.0
AT5G18130 Arabidopsis thaliana HOM05D003715 ORTHO05D003958 8.9e-11 71.6 160 36.9
BraA02t05434Z Brassica rapa HOM05D003715 ORTHO05D003958 8.9e-11 71.6 265 26.0
PSO782G0808 Papaver somniferum HOM05D003715 ORTHO05D003958 1.5e-10 70.9 133 39.8
THA.LOC104802870 Tarenaya hassleriana HOM05D003715 ORTHO05D003958 2.6e-10 70.1 264 28.8
C02p09710 Brassica napus HOM05D003715 ORTHO05D003958 5.8e-10 68.9 272 27.9
CARHR194940 Cardamine hirsuta HOM05D003715 ORTHO05D003958 5.8e-10 68.9 155 35.5
arahy.Tifrunner.gnm1.ann1.FCYU2S Arachis hypogaea HOM05D003715 ORTHO05D003958 7.6e-10 68.6 253 25.3
A10p21370 Brassica napus HOM05D003715 ORTHO05D003958 7.6e-10 68.6 177 31.6
BcaB08g36703 Brassica carinata HOM05D003715 ORTHO05D003958 9.9e-10 68.2 239 30.5
BolC2t06880H Brassica oleracea HOM05D003715 ORTHO05D003958 9.9e-10 68.2 272 27.6
BraA10t44200Z Brassica rapa HOM05D003715 ORTHO05D003958 9.9e-10 68.2 177 31.6
AUR62032043 Chenopodium quinoa HOM05D003715 ORTHO05D003958 2.9e-09 66.6 256 26.6
Aa31LG5G14450 Aethionema arabicum HOM05D003715 ORTHO05D003958 3.7e-09 66.2 244 28.3
BolC9t58728H Brassica oleracea HOM05D003715 ORTHO05D003958 3.7e-09 66.2 179 34.1
Ah.04g153150 Amaranthus hybridus HOM05D003715 ORTHO05D003958 8.4e-09 65.1 249 27.3
C09p58840 Brassica napus HOM05D003715 ORTHO05D003958 1.9e-08 63.9 178 33.1
Zm00001eb302900 Zea mays HOM05D003715 ORTHO05D003958 2.4e-08 63.5 69 44.9
AUR62032710 Chenopodium quinoa HOM05D003715 ORTHO05D003958 3.2e-08 63.2 230 29.1
BcaC03g13579 Brassica carinata HOM05D003715 ORTHO05D003958 5.4e-08 62.4 272 26.5
THA.LOC104827275 Tarenaya hassleriana HOM05D003715 ORTHO05D003958 9.2e-08 61.6 88 46.6
Aa31LG11G11470 Aethionema arabicum HOM05D003715 ORTHO05D003958 1.6e-07 60.8 250 27.6
BcaB05g23302 Brassica carinata HOM05D003715 ORTHO05D003958 3.5e-07 59.7 154 29.2
BcaC05g30288 Brassica carinata HOM05D003715 ORTHO05D003958 2.3e-06 57.0 127 33.1
Zm00001eb160930 Zea mays HOM05D015210 ORTHO05D003958 3.0e-06 56.6 102 36.3


User provided reference genes

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