Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001079g0030 Nicotiana tabacum HOM05D007056 ORTHO05D008278 6.4e-160 567.4 293 100.0
Solyc10g080560.2 Solanum lycopersicum HOM05D007056 ORTHO05D008278 1.8e-130 469.5 275 85.1
Sopen10g031100 Solanum pennellii HOM05D007056 ORTHO05D008278 3.1e-130 468.8 275 85.5
PGSC0003DMG400023706 Solanum tuberosum HOM05D007056 ORTHO05D008278 1.0e-128 463.8 269 86.2
CAN.G128.50 Capsicum annuum HOM05D007056 ORTHO05D008278 3.2e-127 458.8 270 85.6
Peaxi162Scf00249g01221 Petunia axillaris HOM05D007056 ORTHO05D008278 2.6e-121 439.1 270 82.6
SGA_v2.0_scaffold69G23055 Striga asiatica HOM05D007056 ORTHO05D008278 3.4e-100 369.0 228 77.6
CiPaw.09G028900 Carya illinoinensis HOM05D007056 ORTHO05D008278 4.1e-98 362.1 214 80.4
Dinv16370 Davidia involucrata HOM05D007056 ORTHO05D008278 9.1e-98 360.9 223 75.8
Glyma.19G149400 Glycine max HOM05D007056 ORTHO05D008278 2.7e-97 359.4 223 77.6
VMungo1383G1827 Vigna mungo HOM05D007056 ORTHO05D008278 3.5e-97 359.0 212 80.2
Cc06_g15700 Coffea canephora HOM05D007056 ORTHO05D008278 4.5e-97 358.6 254 69.3
arahy.Tifrunner.gnm1.ann1.DK1M71 Arachis hypogaea HOM05D007056 ORTHO05D008278 7.7e-97 357.8 197 86.3
Nn2g15729 Nelumbo nucifera HOM05D007056 ORTHO05D008278 7.7e-97 357.8 279 65.9
Lj2A365G87 Lonicera japonica HOM05D007056 ORTHO05D008278 1.0e-96 357.5 198 83.8
Actinidia38590 Actinidia chinensis HOM05D007056 ORTHO05D008278 1.7e-96 356.7 267 65.9
Cpa.g.sc85.61 Carica papaya HOM05D007056 ORTHO05D008278 1.7e-96 356.7 218 78.0
Gohir.D04G089300 Gossypium hirsutum HOM05D007056 ORTHO05D008278 2.3e-96 356.3 209 79.9
Gorai.012G099400 Gossypium raimondii HOM05D007056 ORTHO05D008278 2.3e-96 356.3 209 79.9
Lalb_Chr18g0048001 Lupinus albus HOM05D007056 ORTHO05D008278 2.9e-96 355.9 222 77.5
arahy.Tifrunner.gnm1.ann1.LTU6F0 Arachis hypogaea HOM05D007056 ORTHO05D008278 5.0e-96 355.1 197 85.8
Ca_08534_v3 Cicer arietinum L. HOM05D007056 ORTHO05D008278 5.0e-96 355.1 223 75.8
Duzib093G0790 Durio zibethinus HOM05D007056 ORTHO05D008278 6.6e-96 354.8 197 83.8
Aqoxy2G00097 Aquilegia oxysepala HOM05D007056 ORTHO05D008278 8.6e-96 354.4 220 77.7
CANSAT64G0992 Cannabis sativa HOM05D007056 ORTHO05D008278 8.6e-96 354.4 200 82.0
Thecc.05G174400 Theobroma cacao HOM05D007056 ORTHO05D008278 1.1e-95 354.0 197 83.8
Phvul.001G143900 Phaseolus vulgaris HOM05D007056 ORTHO05D008278 1.5e-95 353.6 194 86.6
Lj1g0028043 Lotus japonicus HOM05D007056 ORTHO05D008278 2.5e-95 352.8 196 84.2
RcHm_v2.0_Chr3g0479281 Rosa chinensis HOM05D007056 ORTHO05D008278 3.3e-95 352.4 221 75.6
Prupe.7G080200 Prunus persica HOM05D007056 ORTHO05D008278 4.2e-95 352.1 255 69.4
CSS0008084 Camellia sinensis var. sinensis HOM05D007056 ORTHO05D008278 5.5e-95 351.7 222 75.7
Potri.016G060000 Populus trichocarpa HOM05D007056 ORTHO05D008278 7.2e-95 351.3 222 76.1
Eucgr.K01848 Eucalyptus grandis HOM05D007056 ORTHO05D008278 9.5e-95 350.9 199 81.4
QL07p024320 Quercus lobata HOM05D007056 ORTHO05D008278 9.5e-95 350.9 200 81.5
QL07p024358 Quercus lobata HOM05D007056 ORTHO05D008278 9.5e-95 350.9 200 81.5
TAR369G0080 Trochodendron aralioides HOM05D007056 ORTHO05D008278 9.5e-95 350.9 211 78.7
TWI77G0776 Tripterygium wilfordii HOM05D007056 ORTHO05D008278 1.6e-94 350.1 197 82.7
AUR62011999 Chenopodium quinoa HOM05D007056 ORTHO05D008278 2.8e-94 349.4 222 77.5
MBI19_g17420_MAGBIO Magnolia biondii HOM05D007056 ORTHO05D008278 4.7e-94 348.6 195 82.6
Ah.04g152820 Amaranthus hybridus HOM05D007056 ORTHO05D008278 6.1e-94 348.2 194 83.5
Atru.chr8.1149 Acer truncatum HOM05D007056 ORTHO05D008278 8.0e-94 347.8 231 71.9
Ciclev10012466m.g Citrus clementina HOM05D007056 ORTHO05D008278 8.0e-94 347.8 255 69.4
MD14G1054600 Malus domestica HOM05D007056 ORTHO05D008278 8.0e-94 347.8 280 64.3
Os02g0774500 Oryza sativa ssp. japonica HOM05D007056 ORTHO05D008278 1.0e-93 347.4 196 82.1
EL10Ac3g06891 Beta vulgaris HOM05D007056 ORTHO05D008278 1.8e-93 346.7 284 64.1
FAN09G4108 Fragaria x ananassa HOM05D007056 ORTHO05D008278 2.3e-93 346.3 223 76.2
PGR142G3072 Punica granatum HOM05D007056 ORTHO05D008278 2.3e-93 346.3 194 83.0
Cfa020149 Carpinus fangiana HOM05D007056 ORTHO05D008278 5.2e-93 345.1 214 76.2
Sabra16G0062800 Salix brachista HOM05D007056 ORTHO05D008278 1.2e-92 344.0 195 82.1
Medtr7g093540 Medicago truncatula HOM05D007056 ORTHO05D008278 2.0e-92 343.2 222 75.2
AUR62015338 Chenopodium quinoa HOM05D007056 ORTHO05D008278 3.4e-92 342.4 218 77.1
ATR0598G297 Amborella trichopoda HOM05D007056 ORTHO05D008278 5.7e-92 341.7 201 80.1
CsaV3_3G038650 Cucumis sativus L. HOM05D007056 ORTHO05D008278 5.7e-92 341.7 194 80.4
Zm00001eb256530 Zea mays HOM05D007056 ORTHO05D008278 7.5e-92 341.3 194 81.4
HanXRQChr01g0010031 Helianthus annuus HOM05D007056 ORTHO05D008278 9.8e-92 340.9 224 73.7
THA.LOC104809936 Tarenaya hassleriana HOM05D007056 ORTHO05D008278 1.3e-91 340.5 197 78.7
AT3G12040 Arabidopsis thaliana HOM05D007056 ORTHO05D008278 2.2e-91 339.7 198 79.8
FAN14G2508 Fragaria x ananassa HOM05D007056 ORTHO05D008278 3.7e-91 339.0 223 74.4
CARHR086600 Cardamine hirsuta HOM05D007056 ORTHO05D008278 1.4e-90 337.0 198 79.3
Lsat_1_v5_gn_5_165300 Lactuca sativa HOM05D007056 ORTHO05D008278 1.4e-90 337.0 275 63.6
Carub.0003s1138 Capsella rubella HOM05D007056 ORTHO05D008278 1.8e-90 336.7 198 79.3
COL.COLO4_05956 Corchorus olitorius HOM05D007056 ORTHO05D008278 3.1e-90 335.9 212 75.0
Sp3g10270 Schrenkiella parvula HOM05D007056 ORTHO05D008278 3.1e-90 335.9 198 79.3
AL3G23650 Arabidopsis lyrata HOM05D007056 ORTHO05D008278 7.0e-90 334.7 198 78.8
A05p37300 Brassica napus HOM05D007056 ORTHO05D008278 9.2e-90 334.3 198 77.8
Rhsim04G0094900 Rhododendron simsii HOM05D007056 ORTHO05D008278 1.2e-89 334.0 188 81.4
BraA05t22526Z Brassica rapa HOM05D007056 ORTHO05D008278 1.6e-89 333.6 198 77.3
BcaC05g29295 Brassica carinata HOM05D007056 ORTHO05D008278 5.9e-89 331.6 197 77.7
HPP92_004381 Vanilla planifolia HOM05D007056 ORTHO05D008278 7.8e-89 331.3 195 82.1
BcaB06g25552 Brassica carinata HOM05D007056 ORTHO05D008278 1.7e-88 330.1 198 77.3
C05p55770 Brassica napus HOM05D007056 ORTHO05D008278 3.9e-88 328.9 198 77.8
BolC5t34244H Brassica oleracea HOM05D007056 ORTHO05D008278 3.9e-88 328.9 198 77.8
GSVIVG01033475001 Vitis vinifera HOM05D007056 ORTHO05D008278 1.1e-87 327.4 264 63.6
Thhalv10021378m.g Eutrema salsugineum HOM05D007056 ORTHO05D008278 1.5e-87 327.0 198 77.3
TPR.G35780 Trifolium pratense HOM05D007056 ORTHO05D008278 5.6e-87 325.1 204 76.5
DCAR_019779 Daucus carota HOM05D007056 ORTHO05D008278 1.6e-86 323.6 225 67.6
unitig_27.g25110 Utricularia gibba HOM05D007056 ORTHO05D008278 3.6e-86 322.4 221 69.7
Aa31sc80G100 Aethionema arabicum HOM05D007056 ORTHO05D008278 3.7e-83 312.4 197 73.1
SMO146G0068 Selaginella moellendorffii HOM05D007056 ORTHO05D008278 3.7e-83 312.4 193 74.6
Hund24814 Selenicereus undatus HOM05D007056 ORTHO05D008278 3.7e-83 312.4 223 69.5
SEGI_25756 Sequoiadendron giganteum HOM05D007056 ORTHO05D008278 8.3e-83 311.2 194 74.7
AagrBONN_evm.TU.Sc2ySwM_344.2853 Anthoceros agrestis HOM05D007056 ORTHO05D008278 1.9e-82 310.1 194 73.2
CDE06G2434 Ceratophyllum demersum HOM05D007056 ORTHO05D008278 3.2e-82 309.3 212 67.5
Aqoxy3G01855 Aquilegia oxysepala HOM05D007056 ORTHO05D008278 1.0e-80 304.3 262 61.1
ECA248G2501 Erigeron canadensis HOM05D007056 ORTHO05D008278 2.5e-79 299.7 177 79.7
Mapoly0003s0280 Marchantia polymorpha HOM05D007056 ORTHO05D008278 9.5e-79 297.7 195 67.7
PSO541G5037 Papaver somniferum HOM05D007056 ORTHO05D008278 9.5e-79 297.7 271 58.7
Pp3c1_41490 Physcomitrium patens HOM05D007056 ORTHO05D008278 1.6e-78 297.0 226 62.8
PSO675G9168 Papaver somniferum HOM05D007056 ORTHO05D008278 2.8e-78 296.2 271 58.3
vmacro22110 Vaccinium macrocarpon HOM05D007056 ORTHO05D008278 5.8e-76 288.5 360 47.5
Psat3g067120 Pisum sativum HOM05D007056 ORTHO05D008278 1.1e-74 284.3 166 78.3
CBR_g48019 Chara braunii HOM05D000019 ORTHO05D000002 9.2e-74 281.2 190 67.4
BcaB06g25551 Brassica carinata HOM05D007056 ORTHO05D008278 6.0e-73 278.5 166 76.5
Oeu024494.3 Olea europaea HOM05D007056 ORTHO05D008278 1.3e-72 277.3 289 54.7
ECA248G2516 Erigeron canadensis HOM05D007056 ORTHO05D008278 1.1e-71 274.2 161 77.6
FvH4_6g21980 Fragaria vesca HOM05D007056 ORTHO05D008278 4.4e-68 262.3 172 76.7
Sed0027134 Sechium edule HOM05D007056 ORTHO05D008278 2.3e-64 250.0 171 71.3
Gohir.A04G057300 Gossypium hirsutum HOM05D007056 ORTHO05D008278 1.6e-57 227.3 196 60.2
Migut.J01851 Erythranthe guttata HOM05D007056 ORTHO05D008278 4.0e-53 212.6 120 81.7
Psat3g067080 Pisum sativum HOM05D007056 ORTHO05D008278 4.0e-53 212.6 127 80.3
Psat3g067040 Pisum sativum HOM05D007056 ORTHO05D008278 1.5e-52 210.7 187 59.9
ECA248G3402 Erigeron canadensis HOM05D000009 ORTHO05D000008 1.7e-51 207.2 121 77.7
Manes.08G042900 Manihot esculenta HOM05D007056 ORTHO05D008278 6.6e-48 195.3 117 81.2
FAN02G0430 Fragaria x ananassa HOM05D007056 ORTHO05D008278 6.9e-45 185.3 128 75.8
Sc13g0002370 Simmondsia chinensis HOM05D007056 ORTHO05D008278 6.9e-45 185.3 101 86.1
ClCG10G017660 Citrullus lanatus HOM05D007056 ORTHO05D008278 3.4e-44 183.0 215 49.3
MELO3C009610.2 Cucumis melo HOM05D007056 ORTHO05D008278 4.5e-44 182.6 195 50.8
Nitab4.5_0001440g0050 Nicotiana tabacum HOM05D007056 ORTHO05D008278 1.7e-43 180.6 96 88.5
Haze_20013 Corylus avellana HOM05D007056 ORTHO05D008278 4.5e-36 156.0 444 29.7
PRCOL_00003183 Prasinoderma coloniale HOM05D007056 ORTHO05D008278 4.5e-36 156.0 216 44.9
ECA233G2032 Erigeron canadensis HOM05D007056 ORTHO05D008278 1.6e-30 137.5 91 70.3
Hma1.2p1_0645F.1_g194860 Hydrangea macrophylla HOM05D007056 ORTHO05D008278 1.7e-27 127.5 72 76.4
SHI31778 Sapria himalayana HOM05D007056 ORTHO05D008278 3.8e-27 126.3 72 77.8
vmacro22990 Vaccinium macrocarpon HOM05D007056 ORTHO05D008278 4.6e-17 92.8 96 53.1
SHI31775 Sapria himalayana HOM05D000002 ORTHO05D000001 2.7e-09 67.0 45 71.1
Rhsim04G0095100 Rhododendron simsii HOM05D003299 ORTHO05D003811 8.2e-06 55.5 64 50.0


User provided reference genes

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