Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001078g0090 Nicotiana tabacum HOM05D003403 ORTHO05D003889 1.2e-74 283.1 144 100.0
Nitab4.5_0003035g0020 Nicotiana tabacum HOM05D003403 ORTHO05D003889 1.0e-33 147.1 253 42.3
Nitab4.5_0001078g0080 Nicotiana tabacum HOM05D003403 ORTHO05D003889 1.9e-32 142.9 79 91.1
Nitab4.5_0005426g0030 Nicotiana tabacum HOM05D003403 ORTHO05D003889 7.3e-32 141.0 253 40.7
Peaxi162Scf00139g00822 Petunia axillaris HOM05D003403 ORTHO05D003889 5.2e-30 134.8 253 39.9
CAN.G1538.3 Capsicum annuum HOM05D003403 ORTHO05D003889 3.2e-27 125.6 254 38.6
Solyc04g074930.4 Solanum lycopersicum HOM05D003403 ORTHO05D003889 7.8e-26 120.9 253 37.9
Sopen04g029870 Solanum pennellii HOM05D003403 ORTHO05D003889 7.8e-26 120.9 254 37.0
CAN.G1538.4 Capsicum annuum HOM05D003403 ORTHO05D003889 1.3e-25 120.2 253 36.4
PGSC0003DMG402002131 Solanum tuberosum HOM05D003403 ORTHO05D003889 1.3e-25 120.2 254 37.4
Sopen04g029880 Solanum pennellii HOM05D003403 ORTHO05D003889 1.7e-25 119.8 253 37.9
Solyc04g074920.2 Solanum lycopersicum HOM05D003403 ORTHO05D003889 6.6e-25 117.9 254 36.2
PGSC0003DMG401002131 Solanum tuberosum HOM05D003403 ORTHO05D003889 6.9e-22 107.8 126 50.8
DCAR_020012 Daucus carota HOM05D003403 ORTHO05D003889 8.4e-20 100.9 132 44.7
QL09p016911 Quercus lobata HOM05D003403 ORTHO05D003889 3.5e-18 95.5 128 43.8
Cc10_g15490 Coffea canephora HOM05D003403 ORTHO05D003889 1.7e-17 93.2 119 47.1
Sabra02G0080200 Salix brachista HOM05D003403 ORTHO05D003889 1.1e-16 90.5 126 42.1
Manes.02G147800 Manihot esculenta HOM05D003403 ORTHO05D003889 1.9e-16 89.7 126 40.5
CSS0045543 Camellia sinensis var. sinensis HOM05D003403 ORTHO05D003889 2.5e-16 89.4 124 41.1
Potri.002G102300 Populus trichocarpa HOM05D003403 ORTHO05D003889 4.3e-16 88.6 132 40.2
MD15G1380300 Malus domestica HOM05D003403 ORTHO05D003889 9.6e-16 87.4 119 41.2
CSS0049379 Camellia sinensis var. sinensis HOM05D003403 ORTHO05D003889 1.3e-15 87.0 143 37.8
Actinidia10358 Actinidia chinensis HOM05D003403 ORTHO05D003889 6.2e-15 84.7 119 40.3
Hma1.2p1_0961F.1_g241670 Hydrangea macrophylla HOM05D003403 ORTHO05D003889 6.2e-15 84.7 126 40.5
TAR376G0338 Trochodendron aralioides HOM05D003403 ORTHO05D003889 2.4e-14 82.8 128 39.8
CSS0040860 Camellia sinensis var. sinensis HOM05D003403 ORTHO05D003889 3.1e-14 82.4 125 40.0
Atru.chr13.1062 Acer truncatum HOM05D003403 ORTHO05D003889 6.9e-14 81.3 127 41.7
Atru.chr13.1067 Acer truncatum HOM05D003403 ORTHO05D003889 6.9e-14 81.3 127 41.7
Rhsim06G0075300 Rhododendron simsii HOM05D003403 ORTHO05D003889 6.9e-14 81.3 125 40.0
CSS0000552 Camellia sinensis var. sinensis HOM05D003403 ORTHO05D003889 1.2e-13 80.5 131 37.4
FAN04G0524 Fragaria x ananassa HOM05D003403 ORTHO05D003889 1.2e-13 80.5 126 37.3
FvH4_5g35970 Fragaria vesca HOM05D003403 ORTHO05D003889 1.5e-13 80.1 126 36.5
FAN18G3700 Fragaria x ananassa HOM05D003403 ORTHO05D003889 1.5e-13 80.1 126 36.5
vmacro21937 Vaccinium macrocarpon HOM05D003403 ORTHO05D003889 2.0e-13 79.7 119 42.0
PGR042G1758 Punica granatum HOM05D003403 ORTHO05D003889 3.4e-13 79.0 133 36.8
PGSC0003DMG400019842 Solanum tuberosum HOM05D003403 ORTHO05D003889 1.3e-12 77.0 44 77.3
RcHm_v2.0_Chr7g0237711 Rosa chinensis HOM05D003403 ORTHO05D003889 1.7e-12 76.6 126 36.5
vmacro21939 Vaccinium macrocarpon HOM05D003403 ORTHO05D003889 8.4e-12 74.3 118 39.8
vmacro00253 Vaccinium macrocarpon HOM05D003403 ORTHO05D003889 1.1e-11 73.9 128 37.5
Eucgr.F00399 Eucalyptus grandis HOM05D003403 ORTHO05D003889 1.4e-11 73.6 127 37.0
vmacro21940 Vaccinium macrocarpon HOM05D003403 ORTHO05D003889 1.9e-11 73.2 119 38.7
CANSAT25G1241 Cannabis sativa HOM05D003403 ORTHO05D003889 2.1e-10 69.7 135 34.8
PSO675G4927 Papaver somniferum HOM05D003403 ORTHO05D003889 2.1e-10 69.7 128 34.4
MD08G1191500 Malus domestica HOM05D003403 ORTHO05D003889 7.9e-10 67.8 113 36.3
Nitab4.5_0000836g0090 Nicotiana tabacum HOM05D003403 ORTHO05D003889 1.0e-09 67.4 173 33.5
TWI14G0796 Tripterygium wilfordii HOM05D003403 ORTHO05D003889 1.8e-09 66.6 120 34.2
COL.COLO4_32353 Corchorus olitorius HOM05D003403 ORTHO05D003889 8.7e-09 64.3 130 33.1
Duzib132G0423 Durio zibethinus HOM05D003403 ORTHO05D003889 8.7e-09 64.3 133 33.1
A08p17510 Brassica napus HOM05D003403 ORTHO05D003889 1.1e-08 63.9 114 35.1
BraA08t33706Z Brassica rapa HOM05D003403 ORTHO05D003889 1.1e-08 63.9 114 35.1
Thecc.02G132300 Theobroma cacao HOM05D003403 ORTHO05D003889 1.1e-08 63.9 129 33.3
CiPaw.07G169500 Carya illinoinensis HOM05D003403 ORTHO05D003889 1.5e-08 63.5 93 41.9
Lsat_1_v5_gn_5_108940 Lactuca sativa HOM05D003403 ORTHO05D003889 2.5e-08 62.8 129 32.6
Actinidia04403 Actinidia chinensis HOM05D003403 ORTHO05D003889 3.3e-08 62.4 144 31.2
MELO3C024832.2 Cucumis melo HOM05D003403 ORTHO05D003889 4.3e-08 62.0 129 32.6
Lj5A232T96 Lonicera japonica HOM05D003403 ORTHO05D003889 4.3e-08 62.0 130 31.5
Nn5g29952 Nelumbo nucifera HOM05D003403 ORTHO05D003889 4.3e-08 62.0 138 32.6
PSO675G3780 Papaver somniferum HOM05D003403 ORTHO05D003889 5.6e-08 61.6 128 32.8
PSO541G0055 Papaver somniferum HOM05D003403 ORTHO05D003889 7.4e-08 61.2 128 31.2
Aqoxy6G00673 Aquilegia oxysepala HOM05D003403 ORTHO05D003889 9.6e-08 60.8 134 30.6
BcaC01g00974 Brassica carinata HOM05D003403 ORTHO05D003889 9.6e-08 60.8 113 32.7
C03p86510 Brassica napus HOM05D003403 ORTHO05D003889 9.6e-08 60.8 113 32.7
BolC3t20943H Brassica oleracea HOM05D003403 ORTHO05D003889 9.6e-08 60.8 113 32.7
Lalb_Chr16g0382811 Lupinus albus HOM05D003403 ORTHO05D003889 1.6e-07 60.1 134 32.1
PSO541G3609 Papaver somniferum HOM05D003403 ORTHO05D003889 1.6e-07 60.1 128 32.8
PSO675G3436 Papaver somniferum HOM05D003403 ORTHO05D003889 1.6e-07 60.1 120 31.7
arahy.Tifrunner.gnm1.ann1.G9XM6M Arachis hypogaea HOM05D003403 ORTHO05D003889 2.8e-07 59.3 132 30.3
CsaV3_4G009620 Cucumis sativus L. HOM05D003403 ORTHO05D003889 2.8e-07 59.3 129 32.6
Nn1g05483 Nelumbo nucifera HOM05D003403 ORTHO05D003889 2.8e-07 59.3 134 32.8
TAR628G0229 Trochodendron aralioides HOM05D003403 ORTHO05D003889 2.8e-07 59.3 135 30.4
AT4G33600 Arabidopsis thaliana HOM05D003403 ORTHO05D003889 3.7e-07 58.9 108 34.3
Thhalv10027337m.g Eutrema salsugineum HOM05D003403 ORTHO05D003889 3.7e-07 58.9 108 32.4
CANSAT11G1264 Cannabis sativa HOM05D003403 ORTHO05D003889 4.8e-07 58.5 136 30.9
Carub.0007s0684 Capsella rubella HOM05D003403 ORTHO05D003889 4.8e-07 58.5 108 33.3
Ciclev10003510m.g Citrus clementina HOM05D003403 ORTHO05D003889 4.8e-07 58.5 50 62.0
CiPaw.05G031400 Carya illinoinensis HOM05D003403 ORTHO05D003889 6.2e-07 58.2 136 30.9
Eucgr.I02001 Eucalyptus grandis HOM05D003403 ORTHO05D003889 6.2e-07 58.2 132 31.1
PGR142G1332 Punica granatum HOM05D003403 ORTHO05D003889 6.2e-07 58.2 125 31.2
BcaB03g12788 Brassica carinata HOM05D003403 ORTHO05D003889 8.1e-07 57.8 127 31.5
CARHR241690 Cardamine hirsuta HOM05D003403 ORTHO05D003889 8.1e-07 57.8 108 32.4
Ciclev10006690m.g Citrus clementina HOM05D003403 ORTHO05D003889 8.1e-07 57.8 134 30.6
Manes.07G037200 Manihot esculenta HOM05D003403 ORTHO05D003889 8.1e-07 57.8 132 30.3
BcaB03g12786 Brassica carinata HOM05D003403 ORTHO05D003889 1.1e-06 57.4 110 31.8
Haze_10556 Corylus avellana HOM05D003403 ORTHO05D003889 1.1e-06 57.4 127 32.3
Migut.N01089 Erythranthe guttata HOM05D003403 ORTHO05D003889 1.1e-06 57.4 132 33.3
Gorai.013G057200 Gossypium raimondii HOM05D003403 ORTHO05D003889 1.4e-06 57.0 132 31.1
C03p86520 Brassica napus HOM05D003403 ORTHO05D003889 1.8e-06 56.6 127 31.5
BolC3t20945H Brassica oleracea HOM05D003403 ORTHO05D003889 1.8e-06 56.6 127 31.5
Haze_22355 Corylus avellana HOM05D003403 ORTHO05D003889 1.8e-06 56.6 92 42.4
Gohir.A13G070600 Gossypium hirsutum HOM05D003403 ORTHO05D003889 1.8e-06 56.6 132 32.6
Nitab4.5_0000836g0100 Nicotiana tabacum HOM05D003403 ORTHO05D003889 1.8e-06 56.6 37 70.3
Prupe.8G066800 Prunus persica HOM05D003403 ORTHO05D003889 1.8e-06 56.6 136 32.4
Glyma.08G069900 Glycine max HOM05D003403 ORTHO05D003889 2.4e-06 56.2 136 29.4
Gohir.D13G051100 Gossypium hirsutum HOM05D003403 ORTHO05D003889 2.4e-06 56.2 132 32.6
QL11p023770 Quercus lobata HOM05D003403 ORTHO05D003889 2.4e-06 56.2 137 29.9
Cfa005693 Carpinus fangiana HOM05D003403 ORTHO05D003889 3.1e-06 55.8 123 30.1
Sabra17G0034100 Salix brachista HOM05D003403 ORTHO05D003889 3.1e-06 55.8 135 30.4
Sp7g31330 Schrenkiella parvula HOM05D003403 ORTHO05D003889 4.0e-06 55.5 106 32.1
vmacro19952 Vaccinium macrocarpon HOM05D003403 ORTHO05D003889 4.0e-06 55.5 144 29.2
A08p17520 Brassica napus HOM05D003403 ORTHO05D003889 5.3e-06 55.1 127 30.7
BraA08t33707Z Brassica rapa HOM05D003403 ORTHO05D003889 5.3e-06 55.1 127 30.7
Migut.B00568 Erythranthe guttata HOM05D003403 ORTHO05D003889 5.3e-06 55.1 132 33.3
Eucgr.I02004 Eucalyptus grandis HOM05D003403 ORTHO05D003889 5.3e-06 55.1 132 31.1
Migut.N01088 Erythranthe guttata HOM05D003403 ORTHO05D003889 6.9e-06 54.7 137 30.7
FvH4_2g11820 Fragaria vesca HOM05D003403 ORTHO05D003889 6.9e-06 54.7 129 31.8
FAN15G0113 Fragaria x ananassa HOM05D003403 ORTHO05D003889 6.9e-06 54.7 129 31.8
FAN20G0983 Fragaria x ananassa HOM05D003403 ORTHO05D003889 6.9e-06 54.7 129 31.8
FAN24G2603 Fragaria x ananassa HOM05D003403 ORTHO05D003889 6.9e-06 54.7 129 31.8
Potri.007G112500 Populus trichocarpa HOM05D003403 ORTHO05D003889 6.9e-06 54.7 135 28.9
vmacro19950 Vaccinium macrocarpon HOM05D003403 ORTHO05D003889 6.9e-06 54.7 139 30.2
COL.COLO4_32354 Corchorus olitorius HOM05D003403 ORTHO05D003889 9.0e-06 54.3 130 31.5


User provided reference genes

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