Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001060g0010 Nicotiana tabacum HOM05D001767 ORTHO05D001714 3.3e-37 157.9 83 100.0
Nitab4.5_0009660g0010 Nicotiana tabacum HOM05D001767 ORTHO05D001714 3.8e-33 144.4 89 91.0
Peaxi162Scf00053g00082 Petunia axillaris HOM05D001767 ORTHO05D001714 5.7e-21 104.0 96 66.7
PGSC0003DMG400020549 Solanum tuberosum HOM05D001767 ORTHO05D001714 1.2e-15 86.3 107 56.1
Solyc06g007370.1 Solanum lycopersicum HOM05D001767 ORTHO05D001714 1.0e-14 83.2 101 53.5
Sopen06g002300 Solanum pennellii HOM05D001767 ORTHO05D001714 2.3e-14 82.0 100 53.0
Manes.02G217100 Manihot esculenta HOM05D001767 ORTHO05D001714 1.5e-13 79.3 97 53.6
QL01p026098 Quercus lobata HOM05D001767 ORTHO05D001714 5.7e-13 77.4 96 55.2
Thecc.09G358400 Theobroma cacao HOM05D001767 ORTHO05D001714 6.3e-12 73.9 98 56.1
Oeu007789.1 Olea europaea HOM05D001767 ORTHO05D001714 1.8e-11 72.4 91 52.7
Oeu050020.1 Olea europaea HOM05D001767 ORTHO05D001714 1.8e-11 72.4 95 50.5
Potri.013G153100 Populus trichocarpa HOM05D001767 ORTHO05D001714 1.8e-11 72.4 99 50.5
Nn2g11025 Nelumbo nucifera HOM05D001767 ORTHO05D001714 2.4e-11 72.0 102 49.0
Peaxi162Scf00055g00161 Petunia axillaris HOM05D001767 ORTHO05D001714 3.1e-11 71.6 98 50.0
Sabra13G0123100 Salix brachista HOM05D001767 ORTHO05D001714 5.4e-11 70.9 99 48.5
Potri.019G123900 Populus trichocarpa HOM05D001767 ORTHO05D001714 7.0e-11 70.5 99 49.5
CiPaw.14G053800 Carya illinoinensis HOM05D001767 ORTHO05D001714 2.0e-10 68.9 102 51.0
CiPaw.14G054000 Carya illinoinensis HOM05D001767 ORTHO05D001714 2.0e-10 68.9 102 51.0
ClCG02G019220 Citrullus lanatus HOM05D001767 ORTHO05D001714 2.0e-10 68.9 99 50.5
MELO3C025688.2 Cucumis melo HOM05D001767 ORTHO05D001714 2.7e-10 68.6 101 51.5
CsaV3_6G018940 Cucumis sativus L. HOM05D001767 ORTHO05D001714 4.5e-10 67.8 98 50.0
Prupe.6G047800 Prunus persica HOM05D001767 ORTHO05D001714 4.5e-10 67.8 97 50.5
MD03G1057000 Malus domestica HOM05D001767 ORTHO05D001714 7.7e-10 67.0 97 49.5
Duzib168G0893 Durio zibethinus HOM05D001767 ORTHO05D001714 1.0e-09 66.6 98 49.0
Psat5g154320 Pisum sativum HOM05D001767 ORTHO05D001714 2.2e-09 65.5 114 43.0
Sed0020267 Sechium edule HOM05D001767 ORTHO05D001714 3.8e-09 64.7 92 50.0
TAR633G0198 Trochodendron aralioides HOM05D001767 ORTHO05D001714 3.8e-09 64.7 94 45.7
TPR.G25720 Trifolium pratense HOM05D001767 ORTHO05D001714 5.0e-09 64.3 102 44.1
Medtr3g031140 Medicago truncatula HOM05D001767 ORTHO05D001714 8.5e-09 63.5 113 42.5
Sabra19G0122400 Salix brachista HOM05D001767 ORTHO05D001714 1.1e-08 63.2 101 44.6
Sabra19G0132000 Salix brachista HOM05D001767 ORTHO05D001714 1.1e-08 63.2 101 44.6
CSS0019780 Camellia sinensis var. sinensis HOM05D001767 ORTHO05D001714 1.5e-08 62.8 99 47.5
Nn2g13272 Nelumbo nucifera HOM05D001767 ORTHO05D001714 1.5e-08 62.8 105 44.8
Aqoxy1G01274 Aquilegia oxysepala HOM05D001767 ORTHO05D001714 1.9e-08 62.4 97 44.3
FvH4_3g39820 Fragaria vesca HOM05D001767 ORTHO05D001714 1.9e-08 62.4 101 46.5
FAN11G3179 Fragaria x ananassa HOM05D001767 ORTHO05D001714 1.9e-08 62.4 101 46.5
FAN16G1848 Fragaria x ananassa HOM05D001767 ORTHO05D001714 1.9e-08 62.4 101 46.5
FAN21G2420 Fragaria x ananassa HOM05D001767 ORTHO05D001714 1.9e-08 62.4 101 46.5
CiPaw.13G068600 Carya illinoinensis HOM05D001767 ORTHO05D001714 2.5e-08 62.0 102 46.1
FAN25G0410 Fragaria x ananassa HOM05D001767 ORTHO05D001714 3.2e-08 61.6 101 46.5
MD11G1058700 Malus domestica HOM05D001767 ORTHO05D001714 4.2e-08 61.2 95 46.3
Nitab4.5_0000821g0030 Nicotiana tabacum HOM05D001767 ORTHO05D001714 5.5e-08 60.8 85 51.8
Phvul.006G074200 Phaseolus vulgaris HOM05D001767 ORTHO05D001714 1.2e-07 59.7 104 45.2
Sed0010690 Sechium edule HOM05D001767 ORTHO05D001714 1.2e-07 59.7 101 43.6
arahy.Tifrunner.gnm1.ann1.ADC2ZV Arachis hypogaea HOM05D001767 ORTHO05D001714 1.6e-07 59.3 105 41.9
Gohir.D08G220500 Gossypium hirsutum HOM05D001767 ORTHO05D001714 1.6e-07 59.3 91 46.2
RcHm_v2.0_Chr5g0071711 Rosa chinensis HOM05D001767 ORTHO05D001714 1.6e-07 59.3 100 47.0
VMungo0540G2315 Vigna mungo HOM05D001767 ORTHO05D001714 1.6e-07 59.3 103 41.7
Migut.D00844 Erythranthe guttata HOM05D001767 ORTHO05D001714 2.1e-07 58.9 89 49.4
Eucgr.B04008 Eucalyptus grandis HOM05D001767 ORTHO05D001714 2.7e-07 58.5 93 48.4
Aa31LG1G8010 Aethionema arabicum HOM05D001767 ORTHO05D001714 3.6e-07 58.2 95 44.2
Gohir.A08G203400 Gossypium hirsutum HOM05D001767 ORTHO05D001714 3.6e-07 58.2 91 46.2
Gorai.004G234400 Gossypium raimondii HOM05D001767 ORTHO05D001714 3.6e-07 58.2 91 46.2
arahy.Tifrunner.gnm1.ann1.K9E1NX Arachis hypogaea HOM05D001767 ORTHO05D001714 4.7e-07 57.8 105 41.9
COL.COLO4_11161 Corchorus olitorius HOM05D001767 ORTHO05D001714 4.7e-07 57.8 98 52.0
Lalb_Chr18g0051411 Lupinus albus HOM05D001767 ORTHO05D001714 8.0e-07 57.0 101 43.6
Glyma.18G057000 Glycine max HOM05D001767 ORTHO05D001714 1.0e-06 56.6 108 39.8
Glyma.11G163800 Glycine max HOM05D001767 ORTHO05D001714 1.8e-06 55.8 110 40.9
Rhsim13G0063600 Rhododendron simsii HOM05D001767 ORTHO05D001714 1.8e-06 55.8 101 41.6
DCAR_012266 Daucus carota HOM05D001767 ORTHO05D001714 2.3e-06 55.5 95 46.3
Duzib170G0353 Durio zibethinus HOM05D001767 ORTHO05D001714 2.3e-06 55.5 89 41.6
Manes.18G145405 Manihot esculenta HOM05D001767 ORTHO05D001714 2.3e-06 55.5 100 45.0
MBI15_g28867_MAGBIO Magnolia biondii HOM05D001767 ORTHO05D001714 4.0e-06 54.7 92 39.1
PGR102G1598 Punica granatum HOM05D001767 ORTHO05D001714 4.0e-06 54.7 111 42.3
TAR623G0326 Trochodendron aralioides HOM05D001767 ORTHO05D001714 4.0e-06 54.7 90 43.3


User provided reference genes

Program Settings