Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001050g0020 Nicotiana tabacum HOM05D008253 ORTHO05D000007 4.9e-79 297.7 150 100.0
Nitab4.5_0007274g0020 Nicotiana tabacum HOM05D000003 ORTHO05D000007 4.0e-49 198.4 234 51.7
Nitab4.5_0008887g0030 Nicotiana tabacum HOM05D000003 ORTHO05D000007 3.1e-41 172.2 261 42.5
Nitab4.5_0002066g0140 Nicotiana tabacum HOM05D000003 ORTHO05D000007 1.3e-34 150.2 147 57.8
Nitab4.5_0007616g0030 Nicotiana tabacum HOM05D000003 ORTHO05D000007 3.1e-25 119.0 70 78.6
Nitab4.5_0005558g0070 Nicotiana tabacum HOM05D008253 ORTHO05D000007 1.6e-21 106.7 56 83.9
Nitab4.5_0007616g0020 Nicotiana tabacum HOM05D008253 ORTHO05D000007 2.7e-21 105.9 67 83.6
Nitab4.5_0005558g0020 Nicotiana tabacum HOM05D008253 ORTHO05D000007 4.3e-19 98.6 66 80.3
Nitab4.5_0000829g0020 Nicotiana tabacum HOM05D000003 ORTHO05D000007 1.3e-18 97.1 90 56.7
Nitab4.5_0001393g0080 Nicotiana tabacum HOM05D008253 ORTHO05D000007 2.2e-18 96.3 148 41.9
Nitab4.5_0002309g0160 Nicotiana tabacum HOM05D008253 ORTHO05D000007 1.1e-17 94.0 138 46.4
Nitab4.5_0000258g0280 Nicotiana tabacum HOM05D008253 ORTHO05D000283 3.1e-17 92.4 114 49.1
Nitab4.5_0002305g0060 Nicotiana tabacum HOM05D008253 ORTHO05D000007 1.2e-16 90.5 126 46.0
Nitab4.5_0002309g0100 Nicotiana tabacum HOM05D000003 ORTHO05D000007 1.2e-13 80.5 117 45.3
Peaxi162Scf01517g00013 Petunia axillaris HOM05D003862 ORTHO05D004398 1.0e-12 77.4 71 52.1
Peaxi162Scf01102g00016 Petunia axillaris HOM05D000003 ORTHO05D000007 2.3e-12 76.3 85 43.5
Nitab4.5_0001681g0030 Nicotiana tabacum HOM05D000003 ORTHO05D000007 4.3e-11 72.0 70 44.3
Peaxi162Scf00231g00048 Petunia axillaris HOM05D000003 ORTHO05D000007 5.7e-11 71.6 71 46.5
Nitab4.5_0011420g0040 Nicotiana tabacum HOM05D063950 ORTHO05D000007 9.7e-11 70.9 95 38.9
CAN.G853.46 Capsicum annuum HOM05D000003 ORTHO05D000007 3.7e-10 68.9 71 40.8
Nitab4.5_0002309g0140 Nicotiana tabacum HOM05D000003 ORTHO05D000007 6.3e-10 68.2 80 45.0
Peaxi162Scf00896g00022 Petunia axillaris HOM05D000003 ORTHO05D000007 6.3e-10 68.2 71 43.7
Nitab4.5_0000372g0070 Nicotiana tabacum HOM05D000003 ORTHO05D000007 8.2e-10 67.8 68 54.4
Nitab4.5_0001154g0090 Nicotiana tabacum HOM05D000003 ORTHO05D000007 8.2e-10 67.8 70 42.9
Peaxi162Scf00081g00274 Petunia axillaris HOM05D000003 ORTHO05D000007 1.4e-09 67.0 73 42.5
Peaxi162Scf00164g00114 Petunia axillaris HOM05D000003 ORTHO05D000007 1.4e-09 67.0 71 42.3
AUR62042346 Chenopodium quinoa HOM05D000003 ORTHO05D000007 5.3e-09 65.1 83 36.1
Nitab4.5_0010967g0010 Nicotiana tabacum HOM05D000003 ORTHO05D000007 6.9e-09 64.7 71 43.7
Peaxi162Scf00160g00418 Petunia axillaris HOM05D000003 ORTHO05D000007 4.5e-08 62.0 70 40.0
Nitab4.5_0002772g0030 Nicotiana tabacum HOM05D008253 ORTHO05D000007 5.9e-08 61.6 63 44.4
Nitab4.5_0000960g0200 Nicotiana tabacum HOM05D010714 ORTHO05D000007 7.7e-08 61.2 70 41.4
Nitab4.5_0022053g0010 Nicotiana tabacum HOM05D000003 ORTHO05D000007 1.0e-07 60.8 71 40.8
EL10Ac1g01452 Beta vulgaris HOM05D000003 ORTHO05D000007 1.3e-07 60.5 70 37.1
Peaxi162Scf00087g00091 Petunia axillaris HOM05D000003 ORTHO05D000007 1.3e-07 60.5 93 38.7
Peaxi162Scf00255g00326 Petunia axillaris HOM05D000003 ORTHO05D000007 1.3e-07 60.5 61 42.6
Oeu004379.1 Olea europaea HOM05D000003 ORTHO05D000007 2.2e-07 59.7 74 35.1
Nitab4.5_0000650g0140 Nicotiana tabacum HOM05D000003 ORTHO05D000007 3.8e-07 58.9 71 36.6
Nitab4.5_0004586g0050 Nicotiana tabacum HOM05D000003 ORTHO05D000007 3.8e-07 58.9 65 41.5
Nitab4.5_0004660g0060 Nicotiana tabacum HOM05D000003 ORTHO05D000007 5.0e-07 58.5 69 39.1
Nitab4.5_0001411g0060 Nicotiana tabacum HOM05D000003 ORTHO05D000007 6.5e-07 58.2 69 37.7
Sopen05g026260 Solanum pennellii HOM05D000003 ORTHO05D000007 6.5e-07 58.2 69 39.1
ECA003G0003 Erigeron canadensis HOM05D000003 ORTHO05D000007 8.5e-07 57.8 95 30.5
Nitab4.5_0001345g0010 Nicotiana tabacum HOM05D000003 ORTHO05D000007 8.5e-07 57.8 69 37.7
Nitab4.5_0002980g0010 Nicotiana tabacum HOM05D000003 ORTHO05D000007 8.5e-07 57.8 80 33.8
Ah.02g111590 Amaranthus hybridus HOM05D000003 ORTHO05D000007 1.1e-06 57.4 77 32.5
Ah.10g028010 Amaranthus hybridus HOM05D000003 ORTHO05D000007 1.1e-06 57.4 77 32.5
Ah.10g028730 Amaranthus hybridus HOM05D000003 ORTHO05D000007 1.1e-06 57.4 77 32.5
EL10As22g24223 Beta vulgaris HOM05D000003 ORTHO05D000007 1.4e-06 57.0 65 36.9
Dinv13646 Davidia involucrata HOM05D000003 ORTHO05D000007 1.4e-06 57.0 80 30.0
Nitab4.5_0000864g0020 Nicotiana tabacum HOM05D000003 ORTHO05D000007 1.4e-06 57.0 68 36.8
ECA039G0028 Erigeron canadensis HOM05D003783 ORTHO05D004568 1.9e-06 56.6 76 31.6
TPR.G23566 Trifolium pratense HOM05D000003 ORTHO05D000007 1.9e-06 56.6 74 33.8
EL10Ac5g12621 Beta vulgaris HOM05D000003 ORTHO05D000007 2.5e-06 56.2 65 40.0
EL10Ac7g17781 Beta vulgaris HOM05D000003 ORTHO05D000007 2.5e-06 56.2 65 40.0
CANSAT25G3759 Cannabis sativa HOM05D000003 ORTHO05D000007 2.5e-06 56.2 100 28.0
PGSC0003DMG400041473 Solanum tuberosum HOM05D000003 ORTHO05D000007 2.5e-06 56.2 84 34.5
TPR.G31613 Trifolium pratense HOM05D000003 ORTHO05D000007 2.5e-06 56.2 74 31.1
Actinidia13034 Actinidia chinensis HOM05D000003 ORTHO05D000007 3.2e-06 55.8 70 34.3
Ah.04g164600 Amaranthus hybridus HOM05D000003 ORTHO05D000007 3.2e-06 55.8 68 33.8
Ah.04g164670 Amaranthus hybridus HOM05D000003 ORTHO05D000007 3.2e-06 55.8 68 33.8
EL10Ac2g03685 Beta vulgaris HOM05D000003 ORTHO05D000007 3.2e-06 55.8 68 39.7
Actinidia28181 Actinidia chinensis HOM05D000003 ORTHO05D000007 4.2e-06 55.5 83 30.1
CANSAT11G2544 Cannabis sativa HOM05D000003 ORTHO05D000007 4.2e-06 55.5 71 35.2
Sopen00g004530 Solanum pennellii HOM05D000003 ORTHO05D000004 4.2e-06 55.5 81 33.3
Dinv23891 Davidia involucrata HOM05D000003 ORTHO05D000006 5.5e-06 55.1 86 26.7
Nitab4.5_0000113g0240 Nicotiana tabacum HOM05D000003 ORTHO05D000007 5.5e-06 55.1 57 43.9
Psat3g081760 Pisum sativum HOM05D000003 ORTHO05D000007 5.5e-06 55.1 53 39.6
Actinidia10895 Actinidia chinensis HOM05D000003 ORTHO05D000007 7.2e-06 54.7 97 28.9
Dinv00628 Davidia involucrata HOM05D000003 ORTHO05D000007 7.2e-06 54.7 89 32.6
Dinv10465 Davidia involucrata HOM05D000003 ORTHO05D000007 7.2e-06 54.7 85 31.8
Nitab4.5_0001335g0010 Nicotiana tabacum HOM05D000003 ORTHO05D000007 7.2e-06 54.7 69 34.8
Peaxi162Scf00104g00330 Petunia axillaris HOM05D037466 ORTHO05D050237 7.2e-06 54.7 136 29.4
Psat2g143280 Pisum sativum HOM05D000003 ORTHO05D000007 7.2e-06 54.7 68 30.9
PGSC0003DMG400015631 Solanum tuberosum HOM05D000003 ORTHO05D000007 7.2e-06 54.7 76 36.8
Actinidia04095 Actinidia chinensis HOM05D000003 ORTHO05D000007 9.4e-06 54.3 76 35.5
Actinidia28667 Actinidia chinensis HOM05D000003 ORTHO05D000007 9.4e-06 54.3 70 32.9
CANSAT64G2710 Cannabis sativa HOM05D000003 ORTHO05D000007 9.4e-06 54.3 100 26.0
Oeu013644.1 Olea europaea HOM05D000003 ORTHO05D000007 9.4e-06 54.3 92 29.3
Oeu030091.1 Olea europaea HOM05D000003 ORTHO05D000007 9.4e-06 54.3 88 33.0
Peaxi162Scf00298g00031 Petunia axillaris HOM05D000003 ORTHO05D000007 9.4e-06 54.3 57 36.8
TPR.G7851 Trifolium pratense HOM05D000003 ORTHO05D000007 9.4e-06 54.3 81 32.1


User provided reference genes

Program Settings