Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001049g0080 Nicotiana tabacum HOM05D004311 ORTHO05D005145 1.8e-146 522.7 292 100.0
Nitab4.5_0004962g0030 Nicotiana tabacum HOM05D004311 ORTHO05D005145 1.5e-116 423.3 266 82.0
Sopen09g036480 Solanum pennellii HOM05D004311 ORTHO05D005145 1.0e-80 304.3 291 60.8
Solyc09g098560.2 Solanum lycopersicum HOM05D004311 ORTHO05D005145 2.5e-79 299.7 294 59.5
CAN.G710.65 Capsicum annuum HOM05D004311 ORTHO05D005145 3.9e-64 249.2 287 58.2
Nitab4.5_0006710g0020 Nicotiana tabacum HOM05D004311 ORTHO05D005145 8.1e-62 241.5 349 47.0
Peaxi162Scf00319g00915 Petunia axillaris HOM05D004311 ORTHO05D005145 5.4e-58 228.8 272 52.2
PGSC0003DMG400021611 Solanum tuberosum HOM05D004311 ORTHO05D005145 1.4e-45 187.6 230 52.2
Dinv22688 Davidia involucrata HOM05D004311 ORTHO05D005145 1.7e-35 154.1 256 38.3
Actinidia35905 Actinidia chinensis HOM05D004311 ORTHO05D005145 3.8e-35 152.9 254 39.8
CiPaw.01G102900 Carya illinoinensis HOM05D004311 ORTHO05D005145 1.1e-29 134.8 239 38.1
Cfa015780 Carpinus fangiana HOM05D004311 ORTHO05D005145 1.4e-29 134.4 242 37.6
GSVIVG01013563001 Vitis vinifera HOM05D004311 ORTHO05D005145 1.5e-28 131.0 234 38.5
Lsat_1_v5_gn_6_54900 Lactuca sativa HOM05D004311 ORTHO05D005145 1.7e-27 127.5 156 42.9
Sc19g0002150 Simmondsia chinensis HOM05D004311 ORTHO05D005145 2.2e-27 127.1 255 38.0
Thecc.04G184200 Theobroma cacao HOM05D004311 ORTHO05D005145 3.8e-27 126.3 251 35.5
HanXRQChr07g0186701 Helianthus annuus HOM05D004311 ORTHO05D005145 1.4e-26 124.4 174 43.1
Cc03_g13030 Coffea canephora HOM05D004311 ORTHO05D005145 4.2e-26 122.9 170 42.9
SGA_v2.0_scaffold12G06156 Striga asiatica HOM05D004311 ORTHO05D005145 4.2e-26 122.9 180 45.0
Manes.11G116001 Manihot esculenta HOM05D004311 ORTHO05D005145 1.2e-25 121.3 264 42.0
Atru.chr3.1596 Acer truncatum HOM05D004311 ORTHO05D005145 2.1e-25 120.6 250 42.8
MSTRG.20570 Avicennia marina HOM05D004311 ORTHO05D005145 2.7e-25 120.2 263 34.2
Oeu007717.1 Olea europaea HOM05D004311 ORTHO05D005145 2.7e-25 120.2 234 37.6
Prupe.1G188800 Prunus persica HOM05D004311 ORTHO05D005145 3.5e-25 119.8 252 35.3
Potri.017G036200 Populus trichocarpa HOM05D004311 ORTHO05D005145 1.8e-24 117.5 267 34.1
CANSAT11G1749 Cannabis sativa HOM05D004311 ORTHO05D005145 2.3e-24 117.1 165 41.8
Haze_00714 Corylus avellana HOM05D004311 ORTHO05D005145 3.9e-24 116.3 349 29.2
Duzib268G0197 Durio zibethinus HOM05D004311 ORTHO05D005145 5.1e-24 115.9 177 39.5
TWI60G0507 Tripterygium wilfordii HOM05D004311 ORTHO05D005145 6.7e-24 115.5 292 31.5
PGR083G0820 Punica granatum HOM05D004311 ORTHO05D005145 1.1e-23 114.8 252 34.1
TWI34G1341 Tripterygium wilfordii HOM05D004311 ORTHO05D005145 1.1e-23 114.8 248 33.1
SalBow3G3821 Salvia bowleyana HOM05D004311 ORTHO05D005145 1.9e-23 114.0 179 42.5
EL10Ac3g06308 Beta vulgaris HOM05D004311 ORTHO05D005145 2.5e-23 113.6 295 32.9
Potri.007G124150 Populus trichocarpa HOM05D004311 ORTHO05D005145 2.5e-23 113.6 285 33.7
THA.LOC104821356 Tarenaya hassleriana HOM05D004311 ORTHO05D005145 4.3e-23 112.8 290 34.5
Hund12225 Selenicereus undatus HOM05D004311 ORTHO05D005145 5.6e-23 112.5 174 41.4
QL10p045440 Quercus lobata HOM05D004311 ORTHO05D005145 7.4e-23 112.1 323 31.3
Ciclev10019191m.g Citrus clementina HOM05D004311 ORTHO05D005145 2.8e-22 110.2 256 32.0
Eucgr.A00251 Eucalyptus grandis HOM05D004311 ORTHO05D005145 2.8e-22 110.2 254 35.0
HPP92_009171 Vanilla planifolia HOM05D004311 ORTHO05D005145 2.8e-22 110.2 168 41.7
DCAR_028443 Daucus carota HOM05D004311 ORTHO05D005145 6.2e-22 109.0 159 41.5
Gorai.011G145800 Gossypium raimondii HOM05D004311 ORTHO05D005145 6.2e-22 109.0 254 34.3
arahy.Tifrunner.gnm1.ann1.D3CYL9 Arachis hypogaea HOM05D004311 ORTHO05D005145 8.2e-22 108.6 155 45.8
Gohir.D10G132100 Gossypium hirsutum HOM05D004311 ORTHO05D005145 8.2e-22 108.6 254 34.3
unitig_8.g3035 Utricularia gibba HOM05D004311 ORTHO05D005145 8.2e-22 108.6 152 42.1
Atru.chr5.2612 Acer truncatum HOM05D004311 ORTHO05D005145 1.1e-21 108.2 262 38.2
Phvul.007G004100 Phaseolus vulgaris HOM05D004311 ORTHO05D005145 2.4e-21 107.1 228 35.1
Sabra17G0023900 Salix brachista HOM05D004311 ORTHO05D005145 3.1e-21 106.7 269 32.0
Ca_11399_v3 Cicer arietinum L. HOM05D004311 ORTHO05D005145 4.0e-21 106.3 160 40.0
Ca_11402_v3 Cicer arietinum L. HOM05D004311 ORTHO05D005145 4.0e-21 106.3 160 40.0
Ca_29593_v3 Cicer arietinum L. HOM05D004311 ORTHO05D005145 4.0e-21 106.3 160 40.0
Rhsim09G0031800 Rhododendron simsii HOM05D004311 ORTHO05D005145 4.0e-21 106.3 341 28.4
MBI08_g33649_MAGBIO Magnolia biondii HOM05D004311 ORTHO05D005145 5.3e-21 105.9 175 38.9
arahy.Tifrunner.gnm1.ann1.TTS68P Arachis hypogaea HOM05D004311 ORTHO05D005145 6.9e-21 105.5 155 45.2
Glyma.20G245800 Glycine max HOM05D004311 ORTHO05D005145 1.2e-20 104.8 146 44.5
Gohir.A10G134400 Gossypium hirsutum HOM05D004311 ORTHO05D005145 1.5e-20 104.4 254 33.5
Medtr1g116530 Medicago truncatula HOM05D004311 ORTHO05D005145 5.8e-20 102.4 161 39.1
AUR62002610 Chenopodium quinoa HOM05D004311 ORTHO05D005145 1.3e-19 101.3 167 37.1
FAN07G0445 Fragaria x ananassa HOM05D004311 ORTHO05D005145 1.3e-19 101.3 280 31.4
Glyma.10G295800 Glycine max HOM05D004311 ORTHO05D005145 1.3e-19 101.3 146 45.2
TPR.G10413 Trifolium pratense HOM05D004311 ORTHO05D005145 2.2e-19 100.5 145 41.4
Duzib151G0942 Durio zibethinus HOM05D004311 ORTHO05D005145 3.8e-19 99.8 243 34.2
Dinv44218 Davidia involucrata HOM05D004311 ORTHO05D005145 4.9e-19 99.4 249 34.9
Migut.G01038 Erythranthe guttata HOM05D004311 ORTHO05D005145 6.5e-19 99.0 150 40.0
Aa31LG2G1780 Aethionema arabicum HOM05D004311 ORTHO05D005145 1.4e-18 97.8 290 28.3
AUR62030033 Chenopodium quinoa HOM05D004311 ORTHO05D005145 1.4e-18 97.8 186 35.5
AT1G54380 Arabidopsis thaliana HOM05D004311 ORTHO05D005145 4.2e-18 96.3 282 28.7
Nitab4.5_0000526g0040 Nicotiana tabacum HOM05D004311 ORTHO05D005145 4.2e-18 96.3 94 55.3
Psat6g241440 Pisum sativum HOM05D004311 ORTHO05D005145 4.2e-18 96.3 229 32.8
Carub.0004s2496 Capsella rubella HOM05D004311 ORTHO05D005145 9.3e-18 95.1 298 28.5
FvH4_4g11290 Fragaria vesca HOM05D004311 ORTHO05D005145 2.1e-17 94.0 300 29.3
Sed0012126 Sechium edule HOM05D004311 ORTHO05D005145 4.6e-17 92.8 280 28.6
C04p69770 Brassica napus HOM05D004311 ORTHO05D005145 6.0e-17 92.4 285 27.4
CARHR055450 Cardamine hirsuta HOM05D004311 ORTHO05D005145 6.0e-17 92.4 148 37.8
MELO3C017696.2 Cucumis melo HOM05D004311 ORTHO05D005145 1.0e-16 91.7 165 38.8
BcaNung03232 Brassica carinata HOM05D004311 ORTHO05D005145 1.3e-16 91.3 235 37.4
FAN17G0085 Fragaria x ananassa HOM05D004311 ORTHO05D005145 1.3e-16 91.3 285 30.2
CsaV3_4G003570 Cucumis sativus L. HOM05D004311 ORTHO05D005145 1.8e-16 90.9 282 29.8
Lj5g0018220 Lotus japonicus HOM05D004311 ORTHO05D005145 2.3e-16 90.5 243 34.2
Nn2g11494 Nelumbo nucifera HOM05D004311 ORTHO05D005145 2.3e-16 90.5 187 33.7
TAR375G1135 Trochodendron aralioides HOM05D004311 ORTHO05D005145 8.7e-16 88.6 192 35.4
Aqoxy5G04052 Aquilegia oxysepala HOM05D004311 ORTHO05D005145 1.1e-15 88.2 190 30.5
BcaC02g07234 Brassica carinata HOM05D004311 ORTHO05D005145 1.1e-15 88.2 285 28.4
CDE09G0340 Ceratophyllum demersum HOM05D004311 ORTHO05D005145 1.9e-15 87.4 157 37.6
PSO017G7323 Papaver somniferum HOM05D004311 ORTHO05D005145 3.3e-15 86.7 212 31.1
BcaB06g29252 Brassica carinata HOM05D004311 ORTHO05D005145 5.7e-15 85.9 235 29.8
VMungo0720G0448 Vigna mungo HOM05D004311 ORTHO05D005145 7.4e-15 85.5 238 33.6
Sp4g24640 Schrenkiella parvula HOM05D004311 ORTHO05D005145 1.3e-14 84.7 280 25.7
Lalb_Chr21g0307601 Lupinus albus HOM05D004311 ORTHO05D005145 2.8e-14 83.6 162 37.7
C04p03710 Brassica napus HOM05D004311 ORTHO05D005145 1.1e-13 81.6 242 27.7
BolC4t22005H Brassica oleracea HOM05D004311 ORTHO05D005145 1.1e-13 81.6 242 27.7
CSS0021437 Camellia sinensis var. sinensis HOM05D004311 ORTHO05D005145 1.4e-13 81.3 143 35.0
BcaC02g12437 Brassica carinata HOM05D004311 ORTHO05D005145 1.8e-13 80.9 242 27.3
CDE02G0781 Ceratophyllum demersum HOM05D004311 ORTHO05D005145 1.8e-13 80.9 149 32.2
PSO675G5961 Papaver somniferum HOM05D004311 ORTHO05D005145 3.1e-13 80.1 213 31.9
ATR0743G139 Amborella trichopoda HOM05D004311 ORTHO05D005145 5.3e-13 79.3 158 34.2
BraA05t19299Z Brassica rapa HOM05D004311 ORTHO05D005145 6.9e-13 79.0 242 28.5
Lj6A60T47 Lonicera japonica HOM05D004311 ORTHO05D005145 6.9e-13 79.0 72 51.4
CANSAT78G0609 Cannabis sativa HOM05D004311 ORTHO05D005145 1.2e-12 78.2 228 30.3
A05p03080 Brassica napus HOM05D004311 ORTHO05D005145 1.5e-12 77.8 242 27.7
Oeu050349.1 Olea europaea HOM05D004311 ORTHO05D005145 1.5e-12 77.8 129 38.0
Actinidia33018 Actinidia chinensis HOM05D004311 ORTHO05D005145 4.5e-12 76.3 125 38.4
CANSAT01G2758 Cannabis sativa HOM05D004311 ORTHO05D005145 4.5e-12 76.3 191 29.8
BcaNung05216 Brassica carinata HOM05D004311 ORTHO05D005145 5.9e-12 75.9 155 34.8
vmacro00590 Vaccinium macrocarpon HOM05D004311 ORTHO05D005145 1.0e-11 75.1 152 33.6
Sabra17G0023400 Salix brachista HOM05D004311 ORTHO05D005145 1.3e-11 74.7 93 46.2
COL.COLO4_24387 Corchorus olitorius HOM05D004311 ORTHO05D005145 1.7e-11 74.3 245 32.2
vmacro00589 Vaccinium macrocarpon HOM05D004311 ORTHO05D005145 2.9e-11 73.6 56 64.3
Hma1.2p1_0429F.1_g151120 Hydrangea macrophylla HOM05D004311 ORTHO05D005145 3.8e-11 73.2 65 53.8
CARHR137590 Cardamine hirsuta HOM05D004311 ORTHO05D005145 6.5e-11 72.4 43 76.7
Lj6A60T46 Lonicera japonica HOM05D004311 ORTHO05D005145 8.5e-11 72.0 95 43.2
SHI06503 Sapria himalayana HOM05D004311 ORTHO05D005145 1.1e-10 71.6 76 53.9
RcHm_v2.0_Chr4g0407531 Rosa chinensis HOM05D004311 ORTHO05D005145 3.2e-10 70.1 62 53.2
ClCG07G015850 Citrullus lanatus HOM05D004311 ORTHO05D005145 9.3e-10 68.6 46 69.6
BolC4t28477H Brassica oleracea HOM05D004311 ORTHO05D005145 1.2e-09 68.2 274 24.1
MSTRG.21993 Avicennia marina HOM05D004311 ORTHO05D005145 1.6e-09 67.8 143 35.0
MD04G1038300 Malus domestica HOM05D004311 ORTHO05D005145 2.1e-09 67.4 42 71.4
Zm00001eb248350 Zea mays HOM05D004311 ORTHO05D005145 1.3e-08 64.7 182 34.1
Os11g0293300 Oryza sativa ssp. japonica HOM05D004311 ORTHO05D005145 3.9e-08 63.2 166 33.7
DCAR_005511 Daucus carota HOM05D004311 ORTHO05D005145 1.6e-06 57.8 65 46.2
Pp3c18_5230 Physcomitrium patens HOM05D004311 ORTHO05D005145 3.7e-06 56.6 46 54.3
RcHm_v2.0_Chr4g0407521 Rosa chinensis HOM05D004311 ORTHO05D005145 4.8e-06 56.2 135 29.6
Cpa.g.sc1876.1 Carica papaya HOM05D004311 ORTHO05D005145 6.3e-06 55.8 76 39.5


User provided reference genes

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