Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001048g0060 Nicotiana tabacum HOM05D000155 ORTHO05D000022 4.1e-53 211.1 103 100.0
Nitab4.5_0000258g0090 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.3e-19 99.0 125 43.2
Nitab4.5_0004294g0020 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.4e-16 89.0 130 40.0
Nitab4.5_0004637g0040 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.4e-16 89.0 124 40.3
Nitab4.5_0001841g0130 Nicotiana tabacum HOM05D000155 ORTHO05D000022 3.1e-16 88.6 121 40.5
Nitab4.5_0002445g0050 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.0e-15 85.9 68 57.4
Nitab4.5_0001164g0130 Nicotiana tabacum HOM05D000155 ORTHO05D000022 3.4e-15 85.1 125 39.2
Nitab4.5_0000188g0030 Nicotiana tabacum HOM05D000155 ORTHO05D000022 4.4e-15 84.7 125 40.0
Nitab4.5_0000769g0160 Nicotiana tabacum HOM05D000155 ORTHO05D000022 9.9e-15 83.6 68 55.9
Nitab4.5_0000613g0090 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.7e-14 82.8 113 39.8
Nitab4.5_0000213g0180 Nicotiana tabacum HOM05D000155 ORTHO05D000022 4.9e-14 81.3 125 37.6
Nitab4.5_0000639g0110 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.9e-13 79.3 115 40.9
Nitab4.5_0008982g0020 Nicotiana tabacum HOM05D006749 ORTHO05D008352 1.9e-13 79.3 65 56.9
Nitab4.5_0000031g0380 Nicotiana tabacum HOM05D000937 ORTHO05D000787 4.2e-13 78.2 60 56.7
Nitab4.5_0000009g0390 Nicotiana tabacum HOM05D000155 ORTHO05D000022 5.4e-13 77.8 62 51.6
Peaxi162Scf00477g00022 Petunia axillaris HOM05D000155 ORTHO05D000022 7.1e-13 77.4 125 36.8
Nitab4.5_0000548g0080 Nicotiana tabacum HOM05D031068 ORTHO05D000022 2.7e-12 75.5 65 52.3
Nitab4.5_0007332g0010 Nicotiana tabacum HOM05D000155 ORTHO05D000022 4.6e-12 74.7 115 35.7
Nitab4.5_0005500g0010 Nicotiana tabacum HOM05D000155 ORTHO05D000022 6.0e-12 74.3 114 35.1
Nitab4.5_0006629g0050 Nicotiana tabacum HOM05D000155 ORTHO05D000022 6.0e-12 74.3 94 43.6
Nitab4.5_0008823g0030 Nicotiana tabacum HOM05D000155 ORTHO05D000022 6.0e-12 74.3 126 35.7
Nitab4.5_0010722g0030 Nicotiana tabacum HOM05D000155 ORTHO05D000022 6.0e-12 74.3 82 43.9
Nitab4.5_0000563g0190 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.3e-11 72.4 120 35.0
Nitab4.5_0001567g0130 Nicotiana tabacum HOM05D000155 ORTHO05D000022 5.1e-11 71.2 124 33.1
Peaxi162Scf00002g00074 Petunia axillaris HOM05D000155 ORTHO05D000022 5.1e-11 71.2 128 34.4
Nitab4.5_0004844g0020 Nicotiana tabacum HOM05D000155 ORTHO05D000022 6.6e-11 70.9 93 43.0
Nitab4.5_0000335g0250 Nicotiana tabacum HOM05D000155 ORTHO05D000022 8.7e-11 70.5 119 35.3
Peaxi162Scf01147g00005 Petunia axillaris HOM05D000155 ORTHO05D000022 1.1e-10 70.1 129 33.3
PGSC0003DMG400009055 Solanum tuberosum HOM05D000155 ORTHO05D000022 1.5e-10 69.7 113 35.4
Nitab4.5_0001704g0030 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.9e-10 69.3 115 33.0
Nitab4.5_0000084g0340 Nicotiana tabacum HOM05D000155 ORTHO05D000022 3.3e-10 68.6 126 32.5
Nitab4.5_0001255g0060 Nicotiana tabacum HOM05D000155 ORTHO05D000022 3.3e-10 68.6 84 45.2
Nitab4.5_0003841g0050 Nicotiana tabacum HOM05D000155 ORTHO05D000022 3.3e-10 68.6 108 36.1
Nitab4.5_0004745g0010 Nicotiana tabacum HOM05D000155 ORTHO05D000022 7.3e-10 67.4 71 42.3
Nitab4.5_0004776g0050 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.6e-09 66.2 124 33.1
Nitab4.5_0000637g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000022 2.1e-09 65.9 124 30.6
Nitab4.5_0003456g0100 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.1e-09 65.9 99 39.4
Nitab4.5_0003487g0060 Nicotiana tabacum HOM05D000007 ORTHO05D000022 2.1e-09 65.9 126 31.7
Nitab4.5_0007880g0050 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.8e-09 65.5 125 37.6
Nitab4.5_0000256g0270 Nicotiana tabacum HOM05D000155 ORTHO05D000022 3.6e-09 65.1 67 41.8
Peaxi162Scf00064g00007 Petunia axillaris HOM05D000155 ORTHO05D000022 3.6e-09 65.1 62 41.9
Nitab4.5_0003347g0020 Nicotiana tabacum HOM05D000155 ORTHO05D000022 4.8e-09 64.7 124 30.6
PGSC0003DMG400015929 Solanum tuberosum HOM05D000155 ORTHO05D000022 4.8e-09 64.7 60 50.0
Nitab4.5_0001338g0180 Nicotiana tabacum HOM05D000155 ORTHO05D000022 8.1e-09 63.9 126 31.0
Peaxi162Scf00252g00032 Petunia axillaris HOM05D000155 ORTHO05D000022 1.1e-08 63.5 119 33.6
Nitab4.5_0001551g0120 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.4e-08 63.2 62 41.9
Nitab4.5_0000440g0030 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.8e-08 62.8 128 30.5
Nitab4.5_0002438g0040 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.4e-08 62.4 49 53.1
PGSC0003DMG400012094 Solanum tuberosum HOM05D000155 ORTHO05D000022 2.4e-08 62.4 65 44.6
Nitab4.5_0000028g0290 Nicotiana tabacum HOM05D000155 ORTHO05D000022 3.1e-08 62.0 61 45.9
Nitab4.5_0004115g0030 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.2e-07 60.1 127 31.5
Sopen01g005170 Solanum pennellii HOM05D000155 ORTHO05D000022 2.0e-07 59.3 118 31.4
Sopen02g028750 Solanum pennellii HOM05D000155 ORTHO05D000022 2.0e-07 59.3 118 31.4
Peaxi162Scf00251g00097 Petunia axillaris HOM05D000155 ORTHO05D000022 2.6e-07 58.9 64 45.3
Nitab4.5_0000034g0160 Nicotiana tabacum HOM05D031068 ORTHO05D000022 4.5e-07 58.2 54 46.3
Nitab4.5_0001387g0100 Nicotiana tabacum HOM05D024027 ORTHO05D000022 4.5e-07 58.2 84 38.1
Nitab4.5_0000365g0190 Nicotiana tabacum HOM05D000155 ORTHO05D000022 5.8e-07 57.8 127 29.1
CAN.G229.11 Capsicum annuum HOM05D001426 ORTHO05D001389 7.6e-07 57.4 63 39.7
Nitab4.5_0002909g0030 Nicotiana tabacum HOM05D000155 ORTHO05D000022 7.6e-07 57.4 67 38.8
Sopen07g021380 Solanum pennellii HOM05D000155 ORTHO05D000034 7.6e-07 57.4 118 29.7
Nitab4.5_0000108g0070 Nicotiana tabacum HOM05D000072 ORTHO05D000026 9.9e-07 57.0 107 34.6
Nitab4.5_0000758g0170 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.3e-06 56.6 66 45.5
Nitab4.5_0001063g0030 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.3e-06 56.6 61 42.6
SHI15778 Sapria himalayana HOM05D004990 ORTHO05D000022 1.7e-06 56.2 102 32.4
PGSC0003DMG400018630 Solanum tuberosum HOM05D001426 ORTHO05D001389 1.7e-06 56.2 57 45.6
Cc11_g02100 Coffea canephora HOM05D000003 ORTHO05D000022 2.2e-06 55.8 60 46.7
Nitab4.5_0000654g0140 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.2e-06 55.8 120 31.7
Nitab4.5_0000692g0240 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.2e-06 55.8 67 43.3
Nitab4.5_0001400g0050 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.2e-06 55.8 62 41.9
PGSC0003DMG400016975 Solanum tuberosum HOM05D001426 ORTHO05D001389 2.2e-06 55.8 61 41.0
Nitab4.5_0000879g0120 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.9e-06 55.5 57 42.1
MBI16_g05929_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 3.8e-06 55.1 71 38.0
Nitab4.5_0000254g0030 Nicotiana tabacum HOM05D000155 ORTHO05D000022 3.8e-06 55.1 69 37.7
Peaxi162Scf00688g10013 Petunia axillaris HOM05D000385 ORTHO05D000269 3.8e-06 55.1 59 52.5
PGSC0003DMG400033674 Solanum tuberosum HOM05D001426 ORTHO05D001389 3.8e-06 55.1 63 39.7
PGSC0003DMG402031434 Solanum tuberosum HOM05D000003 ORTHO05D000004 3.8e-06 55.1 63 36.5
Nitab4.5_0000923g0110 Nicotiana tabacum HOM05D000155 ORTHO05D000022 4.9e-06 54.7 61 39.3
Nitab4.5_0001697g0060 Nicotiana tabacum HOM05D000155 ORTHO05D000022 4.9e-06 54.7 78 37.2
Nitab4.5_0004409g0020 Nicotiana tabacum HOM05D001426 ORTHO05D001389 4.9e-06 54.7 74 37.8
MBI18_g16546_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 6.4e-06 54.3 66 42.4
Nitab4.5_0000036g0200 Nicotiana tabacum HOM05D000155 ORTHO05D000022 6.4e-06 54.3 67 40.3
Nitab4.5_0000256g0280 Nicotiana tabacum HOM05D000155 ORTHO05D000022 6.4e-06 54.3 66 37.9
Nitab4.5_0002482g0030 Nicotiana tabacum HOM05D000155 ORTHO05D000022 8.4e-06 53.9 119 30.3
Peaxi162Scf00160g01638 Petunia axillaris HOM05D000155 ORTHO05D000022 8.4e-06 53.9 121 29.8
QL08p061842 Quercus lobata HOM05D000003 ORTHO05D000004 8.4e-06 53.9 127 23.6


User provided reference genes

Program Settings