Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001047g0020 Nicotiana tabacum HOM05D007308 ORTHO05D009157 3.5e-100 368.2 181 100.0
Peaxi162Scf00725g00524 Petunia axillaris HOM05D007308 ORTHO05D009157 4.6e-84 314.7 181 86.2
PGSC0003DMG400001980 Solanum tuberosum HOM05D007308 ORTHO05D009157 4.8e-81 304.7 180 84.4
Migut.F00856 Erythranthe guttata HOM05D007308 ORTHO05D009157 1.1e-69 266.9 181 74.6
MSTRG.27555 Avicennia marina HOM05D007308 ORTHO05D009157 2.5e-69 265.8 181 72.9
Dinv08592 Davidia involucrata HOM05D007308 ORTHO05D009157 5.5e-69 264.6 181 74.0
Rhsim09G0141500 Rhododendron simsii HOM05D007308 ORTHO05D009157 3.6e-68 261.9 181 69.6
Hma1.2p1_0457F.1_g156910 Hydrangea macrophylla HOM05D007308 ORTHO05D009157 8.0e-68 260.8 181 71.8
Cc02_g09470 Coffea canephora HOM05D007308 ORTHO05D009157 1.5e-66 256.5 179 70.9
Gorai.013G010700 Gossypium raimondii HOM05D007308 ORTHO05D009157 2.0e-66 256.1 175 72.0
vmacro10315 Vaccinium macrocarpon HOM05D007308 ORTHO05D009157 3.3e-66 255.4 181 70.2
Gohir.D13G010000 Gossypium hirsutum HOM05D007308 ORTHO05D009157 7.4e-66 254.2 175 71.4
SalBow3G3836 Salvia bowleyana HOM05D007308 ORTHO05D009157 9.7e-66 253.8 159 78.0
Gohir.A13G009300 Gossypium hirsutum HOM05D007308 ORTHO05D009157 6.3e-65 251.1 175 70.9
CSS0004692 Camellia sinensis var. sinensis HOM05D007308 ORTHO05D009157 8.2e-65 250.8 179 69.3
Solyc11g006505.1 Solanum lycopersicum HOM05D007308 ORTHO05D009157 8.2e-65 250.8 141 85.1
Prupe.2G071800 Prunus persica HOM05D007308 ORTHO05D009157 1.1e-64 250.4 177 68.9
Sopen11g002410 Solanum pennellii HOM05D007308 ORTHO05D009157 1.1e-64 250.4 141 84.4
ECA232G3668 Erigeron canadensis HOM05D007308 ORTHO05D009157 1.8e-64 249.6 178 70.8
Thecc.10G116800 Theobroma cacao HOM05D007308 ORTHO05D009157 4.1e-64 248.4 180 68.9
Lj3C924T9 Lonicera japonica HOM05D007308 ORTHO05D009157 9.1e-64 247.3 212 62.3
THA.LOC104816471 Tarenaya hassleriana HOM05D007308 ORTHO05D009157 9.1e-64 247.3 169 69.8
arahy.Tifrunner.gnm1.ann1.I1QH9V Arachis hypogaea HOM05D007308 ORTHO05D009157 1.2e-63 246.9 167 70.1
arahy.Tifrunner.gnm1.ann1.ZU0NEU Arachis hypogaea HOM05D007308 ORTHO05D009157 3.5e-63 245.4 167 69.5
unitig_32.g11899 Utricularia gibba HOM05D007308 ORTHO05D009157 4.5e-63 245.0 181 66.3
Potri.010G241700 Populus trichocarpa HOM05D007308 ORTHO05D009157 5.9e-63 244.6 180 66.1
Nn2g14273 Nelumbo nucifera HOM05D007308 ORTHO05D009157 1.3e-62 243.4 179 67.6
CANSAT56G1109 Cannabis sativa HOM05D007308 ORTHO05D009157 3.8e-62 241.9 177 68.4
MBI17_g22148_MAGBIO Magnolia biondii HOM05D007308 ORTHO05D009157 5.0e-62 241.5 177 68.9
PGR044G1814 Punica granatum HOM05D007308 ORTHO05D009157 5.0e-62 241.5 177 65.5
Duzib106G1839 Durio zibethinus HOM05D007308 ORTHO05D009157 6.5e-62 241.1 179 68.2
HanXRQChr05g0147281 Helianthus annuus HOM05D007308 ORTHO05D009157 6.5e-62 241.1 178 66.9
TAR623G1715 Trochodendron aralioides HOM05D007308 ORTHO05D009157 6.5e-62 241.1 176 67.6
Hund06794 Selenicereus undatus HOM05D007308 ORTHO05D009157 1.9e-61 239.6 178 65.7
Eucgr.J00279 Eucalyptus grandis HOM05D007308 ORTHO05D009157 3.2e-61 238.8 157 72.0
GSVIVG01034647001 Vitis vinifera HOM05D007308 ORTHO05D009157 3.2e-61 238.8 179 66.5
CiPaw.13G043100 Carya illinoinensis HOM05D007308 ORTHO05D009157 5.5e-61 238.0 180 66.7
Ciclev10016517m.g Citrus clementina HOM05D007308 ORTHO05D009157 5.5e-61 238.0 177 67.2
HPP92_005473 Vanilla planifolia HOM05D007308 ORTHO05D009157 7.2e-61 237.7 184 62.5
PGR044G1810 Punica granatum HOM05D007308 ORTHO05D009157 1.6e-60 236.5 179 62.6
Sc20g0001110 Simmondsia chinensis HOM05D007308 ORTHO05D009157 1.6e-60 236.5 172 67.4
AL6G14490 Arabidopsis lyrata HOM05D007308 ORTHO05D009157 2.1e-60 236.1 169 66.3
Glyma.20G194000 Glycine max HOM05D007308 ORTHO05D009157 3.6e-60 235.3 165 67.3
Sed0002245 Sechium edule HOM05D007308 ORTHO05D009157 4.7e-60 235.0 177 62.7
AT5G04830 Arabidopsis thaliana HOM05D007308 ORTHO05D009157 6.1e-60 234.6 169 65.7
Lsat_1_v5_gn_3_53161 Lactuca sativa HOM05D007308 ORTHO05D009157 8.0e-60 234.2 178 66.9
Sabra10G0189200 Salix brachista HOM05D000139 ORTHO05D000103 8.0e-60 234.2 178 65.2
Sed0004755 Sechium edule HOM05D007308 ORTHO05D009157 8.0e-60 234.2 161 65.8
QL04p047115 Quercus lobata HOM05D007308 ORTHO05D009157 1.0e-59 233.8 178 66.3
Carub.0006s0371 Capsella rubella HOM05D007308 ORTHO05D009157 2.3e-59 232.6 169 64.5
Sabra08G0011300 Salix brachista HOM05D007308 ORTHO05D009157 2.3e-59 232.6 165 67.3
Lalb_Chr02g0150981 Lupinus albus HOM05D007308 ORTHO05D009157 3.0e-59 232.3 178 63.5
ClCG05G021890 Citrullus lanatus HOM05D007308 ORTHO05D009157 4.0e-59 231.9 175 62.9
CsaV3_5G035250 Cucumis sativus L. HOM05D007308 ORTHO05D009157 5.2e-59 231.5 175 63.4
Aa31LG11G5650 Aethionema arabicum HOM05D007308 ORTHO05D009157 6.7e-59 231.1 157 68.2
CDE02G0914 Ceratophyllum demersum HOM05D007308 ORTHO05D009157 6.7e-59 231.1 168 66.1
BcaC06g32190 Brassica carinata HOM05D007308 ORTHO05D009157 8.8e-59 230.7 158 68.4
Sp6g38000 Schrenkiella parvula HOM05D007308 ORTHO05D009157 8.8e-59 230.7 157 68.8
CARHR208450 Cardamine hirsuta HOM05D007308 ORTHO05D009157 1.2e-58 230.3 170 62.9
Glyma.10G196200 Glycine max HOM05D007308 ORTHO05D009157 1.2e-58 230.3 165 66.1
C09p72050 Brassica napus HOM05D007308 ORTHO05D009157 1.5e-58 229.9 158 68.4
Aqoxy1G00692 Aquilegia oxysepala HOM05D007308 ORTHO05D009157 2.0e-58 229.6 173 65.3
PSO339G2601 Papaver somniferum HOM05D007308 ORTHO05D009157 2.0e-58 229.6 173 66.5
BcaB01g05916 Brassica carinata HOM05D007308 ORTHO05D009157 2.6e-58 229.2 156 67.3
C03p02230 Brassica napus HOM05D007308 ORTHO05D009157 2.6e-58 229.2 176 62.5
BolC3t12774H Brassica oleracea HOM05D007308 ORTHO05D009157 2.6e-58 229.2 176 62.5
Lalb_Chr21g0312841 Lupinus albus HOM05D007308 ORTHO05D009157 2.6e-58 229.2 156 68.6
MD07G1062000 Malus domestica HOM05D007308 ORTHO05D009157 2.6e-58 229.2 172 65.7
Lj5g0023307 Lotus japonicus HOM05D007308 ORTHO05D009157 3.3e-58 228.8 178 65.2
A10p31380 Brassica napus HOM05D007308 ORTHO05D009157 7.5e-58 227.6 158 67.7
Medtr1g090630 Medicago truncatula HOM05D007308 ORTHO05D009157 1.3e-57 226.9 167 65.3
TWI15G0952 Tripterygium wilfordii HOM05D007308 ORTHO05D009157 1.3e-57 226.9 171 63.7
PSO384G3587 Papaver somniferum HOM05D007308 ORTHO05D009157 2.2e-57 226.1 173 65.9
VMungo0720G2616 Vigna mungo HOM05D007308 ORTHO05D009157 2.2e-57 226.1 165 64.2
A03p01870 Brassica napus HOM05D007308 ORTHO05D009157 4.8e-57 224.9 169 62.7
BraA03t09557Z Brassica rapa HOM05D007308 ORTHO05D009157 4.8e-57 224.9 169 62.7
BolC9t59950H Brassica oleracea HOM05D007308 ORTHO05D009157 1.4e-56 223.4 166 65.1
Phvul.007G138800 Phaseolus vulgaris HOM05D007308 ORTHO05D009157 1.4e-56 223.4 163 67.5
SGA_v2.0_scaffold272G46352 Striga asiatica HOM05D007308 ORTHO05D009157 3.1e-56 222.2 244 52.5
Os01g0965900 Oryza sativa ssp. japonica HOM05D007308 ORTHO05D009157 4.1e-56 221.9 154 67.5
Thhalv10014751m.g Eutrema salsugineum HOM05D007308 ORTHO05D009157 7.0e-56 221.1 157 66.2
Zm00001eb362380 Zea mays HOM05D007308 ORTHO05D009157 7.0e-56 221.1 155 65.2
BraA10t45184Z Brassica rapa HOM05D007308 ORTHO05D009157 1.2e-55 220.3 166 64.5
Haze_03470 Corylus avellana HOM05D007308 ORTHO05D009157 4.7e-52 208.4 189 58.2
CSS0017788 Camellia sinensis var. sinensis HOM05D007308 ORTHO05D009157 1.2e-50 203.8 179 59.2
ATR0772G202 Amborella trichopoda HOM05D007308 ORTHO05D009157 4.4e-50 201.8 176 59.1
Pp3c14_20980 Physcomitrium patens HOM05D007308 ORTHO05D009157 4.1e-48 195.3 156 60.3
SEGI_14438 Sequoiadendron giganteum HOM05D007308 ORTHO05D009157 9.1e-48 194.1 150 62.7
Pp3c19_15880 Physcomitrium patens HOM05D007308 ORTHO05D009157 2.7e-47 192.6 152 59.2
SMO143G0271 Selaginella moellendorffii HOM05D007308 ORTHO05D009157 3.5e-47 192.2 153 61.4
Mapoly0021s0141 Marchantia polymorpha HOM05D007308 ORTHO05D009157 1.7e-46 189.9 156 58.3
MELO3C012339.2 Cucumis melo HOM05D007308 ORTHO05D009157 2.3e-46 189.5 141 63.1
AagrBONN_evm.TU.Sc2ySwM_344.2550 Anthoceros agrestis HOM05D007308 ORTHO05D009157 8.6e-46 187.6 151 58.9
Actinidia34730 Actinidia chinensis HOM05D000139 ORTHO05D000103 2.8e-44 182.6 134 69.4
RcHm_v2.0_Chr1g0331851 Rosa chinensis HOM05D007308 ORTHO05D009157 8.0e-44 181.0 133 67.7
SMO265G0003 Selaginella moellendorffii HOM05D007308 ORTHO05D009157 5.7e-42 174.9 153 58.2
CiPaw.14G034600 Carya illinoinensis HOM05D007308 ORTHO05D009157 1.3e-41 173.7 187 50.8
SEGI_29808 Sequoiadendron giganteum HOM05D007308 ORTHO05D009157 9.2e-40 167.5 123 64.2
Manes.10G060700 Manihot esculenta HOM05D007308 ORTHO05D009157 1.9e-37 159.8 120 64.2
Pp3c1_28520 Physcomitrium patens HOM05D007308 ORTHO05D009157 5.2e-35 151.8 119 59.7
BcaNung05151 Brassica carinata HOM05D007308 ORTHO05D009157 7.3e-29 131.3 176 45.5
Potri.008G017701 Populus trichocarpa HOM05D007308 ORTHO05D009157 2.2e-25 119.8 81 66.7
Atru.BG.262.p Acer truncatum HOM05D007308 ORTHO05D009157 6.0e-23 111.7 80 70.0
Pp3c2_31450 Physcomitrium patens HOM05D007308 ORTHO05D009157 5.2e-19 98.6 89 56.2
CBR_g30213 Chara braunii HOM05D007308 ORTHO05D009157 2.6e-18 96.3 146 37.7
PGSC0003DMG400007605 Solanum tuberosum HOM05D000011 ORTHO05D000018 2.3e-14 83.2 45 84.4
Sopen11g002430 Solanum pennellii HOM05D000011 ORTHO05D000018 5.6e-13 78.6 49 75.5
Actinidia27055 Actinidia chinensis HOM05D007308 ORTHO05D009157 8.1e-12 74.7 90 53.3
PGSC0003DMG402001979 Solanum tuberosum HOM05D000011 ORTHO05D000018 2.9e-09 66.2 45 71.1
Sopen11g002570 Solanum pennellii HOM05D000011 ORTHO05D000018 1.4e-08 63.9 39 76.9
Cfa027317 Carpinus fangiana HOM05D007308 ORTHO05D009157 9.3e-08 61.2 117 31.6


User provided reference genes

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