Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001036g0170 Nicotiana tabacum HOM05D006038 ORTHO05D007547 5.0e-227 790.8 408 100.0
Nitab4.5_0002809g0020 Nicotiana tabacum HOM05D006038 ORTHO05D007547 9.8e-183 643.7 364 91.2
PGSC0003DMG400011212 Solanum tuberosum HOM05D006038 ORTHO05D007547 7.8e-164 580.9 365 81.9
Sopen07g002150 Solanum pennellii HOM05D006038 ORTHO05D007547 1.5e-162 576.6 365 81.4
Solyc07g006010.3 Solanum lycopersicum HOM05D006038 ORTHO05D007547 4.3e-162 575.1 365 81.1
Peaxi162Scf00563g00418 Petunia axillaris HOM05D006038 ORTHO05D007547 1.2e-156 557.0 366 78.7
CAN.G1190.21 Capsicum annuum HOM05D006038 ORTHO05D007547 5.4e-149 531.6 355 76.1
Cc06_g14480 Coffea canephora HOM05D006038 ORTHO05D007547 6.5e-126 454.9 364 66.2
Dinv42816 Davidia involucrata HOM05D006038 ORTHO05D007547 5.9e-119 431.8 363 60.9
Dinv43284 Davidia involucrata HOM05D006038 ORTHO05D007547 5.9e-119 431.8 363 60.9
CSS0049632 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 6.1e-116 421.8 360 61.7
CSS0009428 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.0e-115 421.0 360 61.4
CSS0019709 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.0e-115 421.0 360 61.4
MSTRG.6162 Avicennia marina HOM05D006038 ORTHO05D007547 1.1e-114 417.5 359 61.3
Thecc.09G154200 Theobroma cacao HOM05D006038 ORTHO05D007547 2.6e-114 416.4 356 61.2
CSS0006550 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 5.7e-114 415.2 362 61.0
QL02p094222 Quercus lobata HOM05D006038 ORTHO05D007547 7.4e-114 414.8 354 61.0
SGA_v2.0_scaffold265G46074 Striga asiatica HOM05D006038 ORTHO05D007547 7.4e-114 414.8 384 59.1
GSVIVG01023690001 Vitis vinifera HOM05D006038 ORTHO05D007547 6.3e-113 411.8 366 59.0
Rhsim03G0259500 Rhododendron simsii HOM05D006038 ORTHO05D007547 1.8e-112 410.2 372 59.4
Migut.J01393 Erythranthe guttata HOM05D006038 ORTHO05D007547 9.1e-112 407.9 363 59.2
Gohir.D05G008700 Gossypium hirsutum HOM05D006038 ORTHO05D007547 1.1e-109 401.0 363 58.1
Gorai.009G008900 Gossypium raimondii HOM05D006038 ORTHO05D007547 1.1e-109 401.0 363 58.1
Gohir.A05G007900 Gossypium hirsutum HOM05D006038 ORTHO05D007547 1.4e-109 400.6 363 58.1
Actinidia38659 Actinidia chinensis HOM05D006038 ORTHO05D007547 3.2e-109 399.4 352 60.8
TAR625G0922 Trochodendron aralioides HOM05D006038 ORTHO05D007547 6.7e-107 391.7 362 55.8
Haze_19138 Corylus avellana HOM05D006038 ORTHO05D007547 1.1e-106 391.0 375 57.3
TWI63G0196 Tripterygium wilfordii HOM05D006038 ORTHO05D007547 1.1e-106 391.0 367 55.6
Cpa.g.sc199.14 Carica papaya HOM05D006038 ORTHO05D007547 5.7e-106 388.7 362 58.0
ECA236G4218 Erigeron canadensis HOM05D006038 ORTHO05D007547 2.8e-105 386.3 354 59.3
CiPaw.15G164200 Carya illinoinensis HOM05D006038 ORTHO05D007547 4.8e-105 385.6 367 57.2
Manes.14G113700 Manihot esculenta HOM05D006038 ORTHO05D007547 6.3e-105 385.2 365 58.9
Lsat_1_v5_gn_8_64821 Lactuca sativa HOM05D006038 ORTHO05D007547 1.4e-104 384.0 357 57.4
CANSAT11G1787 Cannabis sativa HOM05D006038 ORTHO05D007547 7.0e-104 381.7 361 55.7
Cfa020781 Carpinus fangiana HOM05D006038 ORTHO05D007547 1.2e-103 380.9 366 56.6
MD10G1281400 Malus domestica HOM05D006038 ORTHO05D007547 3.5e-103 379.4 358 57.5
THA.LOC104803556 Tarenaya hassleriana HOM05D006038 ORTHO05D007547 5.0e-102 375.6 358 55.3
CsaV3_2G007740 Cucumis sativus L. HOM05D006038 ORTHO05D007547 1.9e-101 373.6 360 56.4
PGR114G0005 Punica granatum HOM05D006038 ORTHO05D007547 2.5e-101 373.2 353 56.7
PGR142G2424 Punica granatum HOM05D006038 ORTHO05D007547 2.5e-101 373.2 353 56.7
Aqoxy7G02400 Aquilegia oxysepala HOM05D006038 ORTHO05D007547 3.2e-101 372.9 353 54.4
DCAR_020091 Daucus carota HOM05D006038 ORTHO05D007547 3.2e-101 372.9 363 54.8
Nn8g40105 Nelumbo nucifera HOM05D006038 ORTHO05D007547 4.2e-101 372.5 354 55.9
MELO3C004111.2 Cucumis melo HOM05D006038 ORTHO05D007547 9.4e-101 371.3 365 55.6
C07p58240 Brassica napus HOM05D006038 ORTHO05D007547 2.1e-100 370.2 371 55.3
A03p60370 Brassica napus HOM05D006038 ORTHO05D007547 3.6e-100 369.4 371 55.3
BolC7t46282H Brassica oleracea HOM05D006038 ORTHO05D007547 6.1e-100 368.6 371 55.0
MBI15_g26068_MAGBIO Magnolia biondii HOM05D006038 ORTHO05D007547 8.0e-100 368.2 377 53.3
BcaNung01557 Brassica carinata HOM05D006038 ORTHO05D007547 1.0e-99 367.9 380 53.2
ClCG02G014260 Citrullus lanatus HOM05D006038 ORTHO05D007547 1.4e-99 367.5 366 55.5
AL7G21280 Arabidopsis lyrata HOM05D006038 ORTHO05D007547 2.3e-99 366.7 359 56.3
CSS0047764 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 3.0e-99 366.3 361 56.2
AT4G30840 Arabidopsis thaliana HOM05D006038 ORTHO05D007547 4.0e-99 365.9 359 55.7
Sed0013580 Sechium edule HOM05D006038 ORTHO05D007547 4.0e-99 365.9 362 55.5
CSS0029746 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 5.2e-99 365.5 360 56.4
PSO170G4900 Papaver somniferum HOM05D006038 ORTHO05D007547 8.8e-99 364.8 354 54.8
Prupe.1G102000 Prunus persica HOM05D006038 ORTHO05D007547 2.0e-98 363.6 359 53.8
RcHm_v2.0_Chr4g0405491 Rosa chinensis HOM05D006038 ORTHO05D007547 3.4e-98 362.8 364 54.7
Sp7g28720 Schrenkiella parvula HOM05D006038 ORTHO05D007547 4.4e-98 362.5 357 55.7
CARHR238700 Cardamine hirsuta HOM05D006038 ORTHO05D007547 5.7e-98 362.1 359 55.7
PSO017G0013 Papaver somniferum HOM05D006038 ORTHO05D007547 5.7e-98 362.1 354 54.8
Potri.006G180300 Populus trichocarpa HOM05D006038 ORTHO05D007547 5.7e-98 362.1 370 55.1
Atru.chr7.352 Acer truncatum HOM05D006038 ORTHO05D007547 9.7e-98 361.3 362 55.5
Ca_21155_v3 Cicer arietinum L. HOM05D006038 ORTHO05D007547 1.3e-97 360.9 361 55.7
Lalb_Chr13g0300671 Lupinus albus HOM05D006038 ORTHO05D007547 1.7e-97 360.5 360 55.6
Psat4g010160 Pisum sativum HOM05D006038 ORTHO05D007547 1.7e-97 360.5 363 55.9
Ciclev10008825m.g Citrus clementina HOM05D006038 ORTHO05D007547 2.2e-97 360.1 354 56.5
FAN07G2585 Fragaria x ananassa HOM05D006038 ORTHO05D007547 2.2e-97 360.1 367 53.4
BcaNung02736 Brassica carinata HOM05D006038 ORTHO05D007547 2.8e-97 359.8 357 55.7
BraA03t15077Z Brassica rapa HOM05D006038 ORTHO05D007547 2.8e-97 359.8 357 55.7
FvH4_4g09770 Fragaria vesca HOM05D006038 ORTHO05D007547 2.8e-97 359.8 368 53.5
EL10Ac8g18905 Beta vulgaris HOM05D006038 ORTHO05D007547 6.3e-97 358.6 373 54.7
FAN17G0258 Fragaria x ananassa HOM05D006038 ORTHO05D007547 8.3e-97 358.2 367 53.1
Lj4g0023904 Lotus japonicus HOM05D006038 ORTHO05D007547 8.3e-97 358.2 364 54.4
FAN22G1283 Fragaria x ananassa HOM05D006038 ORTHO05D007547 1.1e-96 357.8 367 52.9
Carub.0007s0972 Capsella rubella HOM05D006038 ORTHO05D007547 2.4e-96 356.7 359 54.6
Glyma.02G206900 Glycine max HOM05D006038 ORTHO05D007547 3.1e-96 356.3 352 55.1
Sabra06G0137300 Salix brachista HOM05D006038 ORTHO05D007547 1.3e-94 350.9 370 54.9
HanXRQChr06g0179781 Helianthus annuus HOM05D006038 ORTHO05D007547 5.0e-94 349.0 354 53.7
TPR.G22112 Trifolium pratense HOM05D006038 ORTHO05D007547 5.0e-94 349.0 363 53.7
Medtr4g130280 Medicago truncatula HOM05D006038 ORTHO05D007547 4.2e-93 345.9 368 54.1
Aa31LG2G19530 Aethionema arabicum HOM05D006038 ORTHO05D007547 5.5e-93 345.5 357 53.8
VMungo1215G1375 Vigna mungo HOM05D006038 ORTHO05D007547 5.5e-93 345.5 356 54.2
Hund08960 Selenicereus undatus HOM05D006038 ORTHO05D007547 7.2e-93 345.1 362 51.4
Glyma.17G071100 Glycine max HOM05D006038 ORTHO05D007547 1.2e-92 344.4 355 53.2
Ah.14g084370 Amaranthus hybridus HOM05D001135 ORTHO05D001005 3.6e-92 342.8 360 54.7
Phvul.003G153400 Phaseolus vulgaris HOM05D006038 ORTHO05D007547 6.1e-92 342.0 356 53.9
CDE04G0171 Ceratophyllum demersum HOM05D006038 ORTHO05D007547 1.8e-91 340.5 363 49.9
ATR0580G061 Amborella trichopoda HOM05D006038 ORTHO05D007547 4.0e-91 339.3 361 51.2
Sc14g0000990 Simmondsia chinensis HOM05D006038 ORTHO05D007547 3.8e-86 322.8 360 53.3
vmacro06051 Vaccinium macrocarpon HOM05D006038 ORTHO05D007547 9.5e-85 318.2 369 52.3
HPP92_020613 Vanilla planifolia HOM05D006038 ORTHO05D007547 2.3e-83 313.5 362 48.6
Eucgr.K03188 Eucalyptus grandis HOM05D006038 ORTHO05D007547 1.5e-82 310.8 352 49.4
AUR62025374 Chenopodium quinoa HOM05D006038 ORTHO05D007547 4.3e-77 292.7 242 61.2
AUR62028377 Chenopodium quinoa HOM05D006038 ORTHO05D007547 3.6e-76 289.7 248 60.5
Os08g0266600 Oryza sativa ssp. japonica HOM05D006038 ORTHO05D007547 1.3e-70 271.2 291 49.5
Thhalv10025548m.g Eutrema salsugineum HOM05D006038 ORTHO05D007547 3.6e-68 263.1 296 49.7
Zm00001eb177980 Zea mays HOM05D006038 ORTHO05D007547 1.2e-66 258.1 349 43.3
Dinv41342 Davidia involucrata HOM05D006038 ORTHO05D007547 1.6e-63 247.7 241 54.4
AagrBONN_evm.TU.Sc2ySwM_117.2538 Anthoceros agrestis HOM05D006038 ORTHO05D007547 1.2e-60 238.0 388 37.9
Oeu027617.1 Olea europaea HOM05D006038 ORTHO05D007547 8.1e-60 235.3 164 67.7
SMO367G0193 Selaginella moellendorffii HOM05D006038 ORTHO05D007547 5.2e-59 232.6 354 39.3
COL.COLO4_05400 Corchorus olitorius HOM05D006038 ORTHO05D007547 1.4e-56 224.6 210 57.1
arahy.Tifrunner.gnm1.ann1.3R6I6F Arachis hypogaea HOM05D006038 ORTHO05D007547 1.6e-55 221.1 249 48.2
SHI18668 Sapria himalayana HOM05D006038 ORTHO05D007547 1.0e-54 218.4 331 41.1
CSS0027410 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.6e-52 211.1 216 55.1
CSS0013086 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 9.9e-50 201.8 210 54.8
CSS0009266 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.1e-48 198.4 216 51.9
Lj7A464T42 Lonicera japonica HOM05D006038 ORTHO05D007547 1.0e-46 191.8 211 51.7
Cfa020780 Carpinus fangiana HOM05D006038 ORTHO05D007547 2.3e-46 190.7 222 49.5
A01p07320 Brassica napus HOM05D006038 ORTHO05D007547 2.6e-42 177.2 257 42.0
CSS0022095 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 7.1e-40 169.1 106 74.5
Lj7A464G38 Lonicera japonica HOM05D006038 ORTHO05D007547 2.1e-39 167.5 145 62.8
CBR_g22430 Chara braunii HOM05D006038 ORTHO05D007547 9.6e-37 158.7 383 30.3
SEGI_08614 Sequoiadendron giganteum HOM05D006038 ORTHO05D007547 6.4e-33 146.0 142 52.8
CSS0024276 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.1e-27 128.6 216 41.7
Pp3c6_28770 Physcomitrium patens HOM05D006038 ORTHO05D007547 4.9e-25 119.8 162 40.7
CSS0034156 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 4.2e-16 90.1 49 83.7
CSS0047172 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 7.1e-16 89.4 48 87.5
CSS0031036 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 3.0e-14 84.0 48 81.2
BcaNung03435 Brassica carinata HOM05D001147 ORTHO05D000823 2.2e-12 77.8 132 41.7
A01p07330 Brassica napus HOM05D006038 ORTHO05D007547 2.7e-07 60.8 37 78.4
Zm00001eb124580 Zea mays HOM05D006038 ORTHO05D007547 3.9e-06 57.0 38 68.4


User provided reference genes

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