Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001036g0130 Nicotiana tabacum HOM05D022295 ORTHO05D008827 2.2e-188 662.1 343 100.0
Nitab4.5_0006744g0030 Nicotiana tabacum HOM05D022295 ORTHO05D008827 4.4e-168 594.7 344 91.6
Peaxi162Scf00563g00416 Petunia axillaris HOM05D022295 ORTHO05D008827 1.3e-87 327.4 370 55.1
Sopen07g002110 Solanum pennellii HOM05D022295 ORTHO05D008827 5.7e-59 232.3 352 44.9
Solyc07g005980.2 Solanum lycopersicum HOM05D022295 ORTHO05D008827 1.8e-57 227.3 352 43.5
PGSC0003DMG400011154 Solanum tuberosum HOM05D008438 ORTHO05D008827 4.4e-19 99.8 64 68.8
Rhsim03G0259300 Rhododendron simsii HOM05D008438 ORTHO05D008827 7.6e-19 99.0 160 37.5
Dinv42819 Davidia involucrata HOM05D019090 ORTHO05D008827 9.9e-19 98.6 168 37.5
Dinv43281 Davidia involucrata HOM05D019090 ORTHO05D008827 9.9e-19 98.6 168 37.5
Actinidia38661 Actinidia chinensis HOM05D008438 ORTHO05D008827 3.8e-18 96.7 186 38.2
QL02p094192 Quercus lobata HOM05D019529 ORTHO05D008827 1.3e-13 81.6 98 37.8
AUR62025372 Chenopodium quinoa HOM05D030418 ORTHO05D008827 4.8e-13 79.7 233 32.2
HanXRQChr05g0131701 Helianthus annuus HOM05D019090 ORTHO05D008827 4.8e-13 79.7 189 31.7
TAR625G0030 Trochodendron aralioides HOM05D008438 ORTHO05D008827 6.2e-13 79.3 152 34.2
GSVIVG01016106001 Vitis vinifera HOM05D008438 ORTHO05D008827 6.2e-13 79.3 79 41.8
Cfa020785 Carpinus fangiana HOM05D019529 ORTHO05D008827 8.1e-13 79.0 137 32.1
TWI32G0905 Tripterygium wilfordii HOM05D008438 ORTHO05D008827 1.4e-12 78.2 82 48.8
EL10Ac8g18908 Beta vulgaris HOM05D030418 ORTHO05D008827 2.4e-12 77.4 151 37.1
Thecc.09G153900 Theobroma cacao HOM05D019525 ORTHO05D008827 3.1e-12 77.0 85 42.4
Sabra06G0137500 Salix brachista HOM05D037217 ORTHO05D008827 5.3e-12 76.3 130 35.4
Actinidia08936 Actinidia chinensis HOM05D017379 ORTHO05D008827 1.2e-11 75.1 83 41.0
Duzib235G0641 Durio zibethinus HOM05D032892 ORTHO05D008827 1.5e-11 74.7 80 42.5
ECA247G0974 Erigeron canadensis HOM05D008438 ORTHO05D008827 2.0e-11 74.3 81 38.3
Duzib168G1121 Durio zibethinus HOM05D019525 ORTHO05D008827 2.6e-11 73.9 103 38.8
Cc04_g05290 Coffea canephora HOM05D008438 ORTHO05D008827 3.4e-11 73.6 79 41.8
Hma1.2p1_1914F.1_g307390 Hydrangea macrophylla HOM05D008438 ORTHO05D008827 4.5e-11 73.2 79 41.8
TWI34G1835 Tripterygium wilfordii HOM05D008438 ORTHO05D008827 4.5e-11 73.2 86 43.0
SalBow7G4248 Salvia bowleyana HOM05D008438 ORTHO05D008827 5.8e-11 72.8 125 32.8
SGA_v2.0_scaffold37G14678 Striga asiatica HOM05D008438 ORTHO05D008827 5.8e-11 72.8 87 41.4
Glyma.13G371300 Glycine max HOM05D022716 ORTHO05D008827 9.9e-11 72.0 72 44.4
COL.COLO4_05403 Corchorus olitorius HOM05D019525 ORTHO05D008827 1.3e-10 71.6 172 32.6
RcHm_v2.0_Chr2g0132351 Rosa chinensis HOM05D015689 ORTHO05D008827 1.7e-10 71.2 83 39.8
TWI18G0426 Tripterygium wilfordii HOM05D008438 ORTHO05D008827 1.7e-10 71.2 82 45.1
AUR62028379 Chenopodium quinoa HOM05D030418 ORTHO05D008827 2.2e-10 70.9 304 28.9
FvH4_6g28290 Fragaria vesca HOM05D015689 ORTHO05D008827 3.8e-10 70.1 89 37.1
FAN09G3978 Fragaria x ananassa HOM05D015689 ORTHO05D008827 3.8e-10 70.1 89 37.1
FAN14G1731 Fragaria x ananassa HOM05D015689 ORTHO05D008827 3.8e-10 70.1 89 37.1
ClCG09G003500 Citrullus lanatus HOM05D008438 ORTHO05D008827 4.9e-10 69.7 72 43.1
Glyma.15G002400 Glycine max HOM05D022716 ORTHO05D008827 4.9e-10 69.7 72 43.1
Gohir.D04G088150 Gossypium hirsutum HOM05D019525 ORTHO05D008827 4.9e-10 69.7 125 33.6
Gorai.012G098400 Gossypium raimondii HOM05D019525 ORTHO05D008827 4.9e-10 69.7 125 33.6
HanXRQChr05g0141581 Helianthus annuus HOM05D019090 ORTHO05D008827 4.9e-10 69.7 113 35.4
MD17G1226300 Malus domestica HOM05D015689 ORTHO05D008827 4.9e-10 69.7 79 41.8
PSO063G1826 Papaver somniferum HOM05D008438 ORTHO05D008827 4.9e-10 69.7 105 33.3
PSO782G4356 Papaver somniferum HOM05D008438 ORTHO05D008827 4.9e-10 69.7 79 35.4
Eucgr.F03984 Eucalyptus grandis HOM05D008438 ORTHO05D008827 6.4e-10 69.3 83 38.6
FAN02G3655 Fragaria x ananassa HOM05D015689 ORTHO05D008827 6.4e-10 69.3 107 33.6
Aqoxy7G03345 Aquilegia oxysepala HOM05D008438 ORTHO05D008827 8.4e-10 68.9 113 32.7
Rhsim12G0185500 Rhododendron simsii HOM05D017379 ORTHO05D008827 8.4e-10 68.9 65 47.7
HanXRQChr02g0033611 Helianthus annuus HOM05D008438 ORTHO05D008827 1.1e-09 68.6 81 40.7
MELO3C023487.2 Cucumis melo HOM05D008438 ORTHO05D008827 1.4e-09 68.2 72 41.7
CsaV3_7G031700 Cucumis sativus L. HOM05D008438 ORTHO05D008827 1.4e-09 68.2 72 41.7
MSTRG.22807 Avicennia marina HOM05D008438 ORTHO05D008827 1.9e-09 67.8 82 39.0
Potri.001G042000 Populus trichocarpa HOM05D008438 ORTHO05D008827 3.2e-09 67.0 100 34.0
COL.COLO4_26771 Corchorus olitorius HOM05D032892 ORTHO05D008827 4.2e-09 66.6 104 33.7
Potri.006G180600 Populus trichocarpa HOM05D037217 ORTHO05D008827 4.2e-09 66.6 260 27.7
Prupe.3G103500 Prunus persica HOM05D015689 ORTHO05D008827 4.2e-09 66.6 80 41.2
Sabra01G0028800 Salix brachista HOM05D008438 ORTHO05D008827 4.2e-09 66.6 123 32.5
CANSAT56G0832 Cannabis sativa HOM05D008438 ORTHO05D008827 5.4e-09 66.2 111 31.5
Medtr4g065580 Medicago truncatula HOM05D024284 ORTHO05D025022 5.4e-09 66.2 173 32.9
Sabra18G0088400 Salix brachista HOM05D037217 ORTHO05D008827 5.4e-09 66.2 69 40.6
AUR62032995 Chenopodium quinoa HOM05D032589 ORTHO05D008827 7.1e-09 65.9 65 44.6
CAN.G1008.6 Capsicum annuum HOM05D008438 ORTHO05D008827 9.3e-09 65.5 140 31.4
Rhsim08G0203200 Rhododendron simsii HOM05D004918 ORTHO05D005706 1.2e-08 65.1 80 38.8
QL02p094184 Quercus lobata HOM05D019529 ORTHO05D008827 1.6e-08 64.7 146 30.1
Haze_16688 Corylus avellana HOM05D008438 ORTHO05D008827 2.1e-08 64.3 79 36.7
ECA234G2252 Erigeron canadensis HOM05D019529 ORTHO05D008827 3.5e-08 63.5 206 25.7
SGA_v2.0_scaffold5G02798 Striga asiatica HOM05D008438 ORTHO05D008827 3.5e-08 63.5 221 29.0
HanXRQChr04g0100031 Helianthus annuus HOM05D008438 ORTHO05D008827 7.9e-08 62.4 165 27.3
Ciclev10026162m.g Citrus clementina HOM05D008438 ORTHO05D008827 1.3e-07 61.6 65 38.5
Nn8g40077 Nelumbo nucifera HOM05D008438 ORTHO05D008827 1.8e-07 61.2 109 30.3
Actinidia18261 Actinidia chinensis HOM05D017379 ORTHO05D008827 2.3e-07 60.8 77 36.4
Sed0012806 Sechium edule HOM05D008438 ORTHO05D008827 2.3e-07 60.8 175 30.3
Migut.I00674 Erythranthe guttata HOM05D008438 ORTHO05D008827 3.9e-07 60.1 72 38.9
Nitab4.5_0004738g0100 Nicotiana tabacum HOM05D008438 ORTHO05D008827 3.9e-07 60.1 134 30.6
Peaxi162Scf00314g01044 Petunia axillaris HOM05D008438 ORTHO05D008827 6.7e-07 59.3 222 26.6
unitig_52.g17481 Utricularia gibba HOM05D008438 ORTHO05D008827 8.7e-07 58.9 204 28.9
Haze_19141 Corylus avellana HOM05D019529 ORTHO05D008827 1.5e-06 58.2 295 23.1
Psat1g023600 Pisum sativum HOM05D024284 ORTHO05D025022 5.6e-06 56.2 191 27.2
VMungo1080G1089 Vigna mungo HOM05D022716 ORTHO05D008827 5.6e-06 56.2 206 26.2
Solyc03g117660.4 Solanum lycopersicum HOM05D008438 ORTHO05D008827 7.4e-06 55.8 63 34.9
Sopen03g036570 Solanum pennellii HOM05D008438 ORTHO05D008827 7.4e-06 55.8 63 34.9


User provided reference genes

Program Settings