Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001036g0090 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.9e-79 299.7 141 100.0
Nitab4.5_0002499g0130 Nicotiana tabacum HOM05D000007 ORTHO05D000017 4.1e-26 122.5 112 56.2
Nitab4.5_0001198g0090 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.2e-25 120.9 102 60.8
PGSC0003DMG400025404 Solanum tuberosum HOM05D000007 ORTHO05D000017 4.7e-22 109.0 110 53.6
PGSC0003DMG400003869 Solanum tuberosum HOM05D000007 ORTHO05D000017 3.4e-20 102.8 109 48.6
PGSC0003DMG400013272 Solanum tuberosum HOM05D000007 ORTHO05D000017 2.2e-19 100.1 102 52.0
Solyc09g005480.3 Solanum lycopersicum HOM05D000007 ORTHO05D000017 1.6e-17 94.0 103 46.6
Solyc09g005520.2 Solanum lycopersicum HOM05D000007 ORTHO05D000017 7.8e-17 91.7 103 46.6
Sopen09g001370 Solanum pennellii HOM05D000007 ORTHO05D000017 7.8e-17 91.7 112 43.8
PGSC0003DMG400010705 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.0e-16 91.3 116 46.6
PGSC0003DMG400029801 Solanum tuberosum HOM05D000007 ORTHO05D000017 2.3e-16 90.1 88 52.3
CAN.G108.40 Capsicum annuum HOM05D000007 ORTHO05D000017 3.0e-16 89.7 102 50.0
Nitab4.5_0000856g0040 Nicotiana tabacum HOM05D000007 ORTHO05D000017 3.0e-16 89.7 102 51.0
Solyc09g005770.1 Solanum lycopersicum HOM05D000007 ORTHO05D000017 5.1e-16 89.0 100 46.0
Sopen09g001690 Solanum pennellii HOM05D000007 ORTHO05D000017 1.1e-15 87.8 88 50.0
CAN.G696.5 Capsicum annuum HOM05D001580 ORTHO05D000017 9.6e-15 84.7 98 45.9
Nitab4.5_0004725g0030 Nicotiana tabacum HOM05D000007 ORTHO05D000017 9.6e-15 84.7 104 47.1
CAN.G1156.5 Capsicum annuum HOM05D000007 ORTHO05D000017 1.3e-14 84.3 100 45.0
PGSC0003DMG400013290 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.6e-14 84.0 106 46.2
CAN.G1227.3 Capsicum annuum HOM05D000185 ORTHO05D000017 2.1e-14 83.6 112 42.0
Nitab4.5_0002499g0060 Nicotiana tabacum HOM05D000007 ORTHO05D000017 4.8e-14 82.4 106 48.1
CAN.G1121.8 Capsicum annuum HOM05D000007 ORTHO05D000017 6.2e-14 82.0 91 48.4
PGSC0003DMG400043483 Solanum tuberosum HOM05D000007 ORTHO05D000017 6.2e-14 82.0 114 43.0
PGSC0003DMG400043742 Solanum tuberosum HOM05D000007 ORTHO05D000017 6.2e-14 82.0 104 43.3
Nitab4.5_0000874g0100 Nicotiana tabacum HOM05D000007 ORTHO05D000017 8.1e-14 81.6 111 45.0
Sopen09g001450 Solanum pennellii HOM05D000007 ORTHO05D000017 8.1e-14 81.6 103 41.7
CAN.G575.120 Capsicum annuum HOM05D000007 ORTHO05D000017 1.1e-13 81.3 107 44.9
PGSC0003DMG400013291 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.8e-13 80.5 110 47.3
Nitab4.5_0001088g0160 Nicotiana tabacum HOM05D000007 ORTHO05D000017 2.4e-13 80.1 83 51.8
CAN.G1121.7 Capsicum annuum HOM05D000007 ORTHO05D000017 3.1e-13 79.7 102 42.2
Nitab4.5_0017036g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000017 4.0e-13 79.3 112 40.2
Nitab4.5_0015235g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000017 5.3e-13 79.0 144 36.1
CAN.G2075.9 Capsicum annuum HOM05D000007 ORTHO05D000017 9.0e-13 78.2 107 44.9
CAN.G321.66 Capsicum annuum HOM05D000007 ORTHO05D000017 1.2e-12 77.8 90 43.3
Solyc11g012540.2 Solanum lycopersicum HOM05D000007 ORTHO05D000017 2.6e-12 76.6 106 43.4
PGSC0003DMG400028421 Solanum tuberosum HOM05D000007 ORTHO05D000017 3.4e-12 76.3 105 38.1
CAN.G1470.6 Capsicum annuum HOM05D000007 ORTHO05D000017 4.5e-12 75.9 108 38.9
Sopen11g007270 Solanum pennellii HOM05D000007 ORTHO05D000017 5.8e-12 75.5 105 41.9
Sopen11g007290 Solanum pennellii HOM05D000007 ORTHO05D000017 5.8e-12 75.5 108 46.3
Solyc11g012550.3 Solanum lycopersicum HOM05D000007 ORTHO05D000017 9.9e-12 74.7 106 45.3
CAN.G1579.17 Capsicum annuum HOM05D000007 ORTHO05D000017 1.3e-11 74.3 109 46.8
CAN.G2075.8 Capsicum annuum HOM05D000007 ORTHO05D011633 1.3e-11 74.3 109 46.8
CAN.G575.77 Capsicum annuum HOM05D000007 ORTHO05D000017 1.3e-11 74.3 88 48.9
Nitab4.5_0002050g0190 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.7e-11 73.9 113 38.9
CAN.G181.19 Capsicum annuum HOM05D000007 ORTHO05D000017 2.2e-11 73.6 88 47.7
CAN.G575.138 Capsicum annuum HOM05D000007 ORTHO05D000017 2.2e-11 73.6 89 46.1
Nitab4.5_0005858g0100 Nicotiana tabacum HOM05D000007 ORTHO05D000017 2.2e-11 73.6 122 37.7
PGSC0003DMG400027935 Solanum tuberosum HOM05D000007 ORTHO05D000017 2.9e-11 73.2 88 43.2
CAN.G484.1 Capsicum annuum HOM05D000007 ORTHO05D000017 3.8e-11 72.8 105 44.8
PGSC0003DMG400040733 Solanum tuberosum HOM05D000007 ORTHO05D000017 3.8e-11 72.8 117 39.3
CAN.G2177.13 Capsicum annuum HOM05D000007 ORTHO05D000017 4.9e-11 72.4 104 46.2
Sopen11g006650 Solanum pennellii HOM05D000007 ORTHO05D000017 4.9e-11 72.4 92 44.6
CAN.G1209.3 Capsicum annuum HOM05D000007 ORTHO05D000017 8.4e-11 71.6 89 44.9
CAN.G1579.16 Capsicum annuum HOM05D000007 ORTHO05D000017 8.4e-11 71.6 105 43.8
CAN.G222.158 Capsicum annuum HOM05D000007 ORTHO05D000017 8.4e-11 71.6 105 41.9
CAN.G222.159 Capsicum annuum HOM05D000007 ORTHO05D000017 8.4e-11 71.6 105 41.9
CAN.G2702.1 Capsicum annuum HOM05D000007 ORTHO05D000017 8.4e-11 71.6 105 43.8
PGSC0003DMG400004721 Solanum tuberosum HOM05D000007 ORTHO05D000017 8.4e-11 71.6 106 44.3
PGSC0003DMG400042553 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.1e-10 71.2 111 39.6
PGSC0003DMG400040830 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.4e-10 70.9 107 44.9
PGSC0003DMG400013260 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.9e-10 70.5 88 48.9
CAN.G1557.16 Capsicum annuum HOM05D000007 ORTHO05D000017 2.4e-10 70.1 90 47.8
CAN.G575.119 Capsicum annuum HOM05D000007 ORTHO05D000017 2.4e-10 70.1 69 53.6
Sopen11g004020 Solanum pennellii HOM05D000007 ORTHO05D000017 2.4e-10 70.1 105 41.0
CAN.G2177.14 Capsicum annuum HOM05D000007 ORTHO05D000017 3.2e-10 69.7 89 44.9
CAN.G1565.4 Capsicum annuum HOM05D000007 ORTHO05D000017 5.4e-10 68.9 113 41.6
Nitab4.5_0000143g0320 Nicotiana tabacum HOM05D000007 ORTHO05D000017 5.4e-10 68.9 57 59.6
CAN.G1470.10 Capsicum annuum HOM05D000007 ORTHO05D000017 7.1e-10 68.6 109 38.5
Nitab4.5_0004725g0060 Nicotiana tabacum HOM05D000007 ORTHO05D000017 7.1e-10 68.6 88 45.5
Sopen11g004110 Solanum pennellii HOM05D000007 ORTHO05D000017 7.1e-10 68.6 105 41.0
CAN.G222.162 Capsicum annuum HOM05D000007 ORTHO05D000017 9.3e-10 68.2 104 41.3
Nitab4.5_0006683g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000017 9.3e-10 68.2 77 50.6
CAN.G851.36 Capsicum annuum HOM05D000007 ORTHO05D000017 1.2e-09 67.8 82 50.0
CAN.G1186.26 Capsicum annuum HOM05D000007 ORTHO05D000017 1.6e-09 67.4 126 39.7
PGSC0003DMG400037258 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.6e-09 67.4 99 41.4
PGSC0003DMG401013254 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.6e-09 67.4 87 44.8
Nitab4.5_0007853g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000017 2.1e-09 67.0 95 42.1
CAN.G1344.10 Capsicum annuum HOM05D000007 ORTHO05D000017 2.7e-09 66.6 105 41.9
CAN.G575.102 Capsicum annuum HOM05D000007 ORTHO05D000017 2.7e-09 66.6 87 48.3
CAN.G786.31 Capsicum annuum HOM05D000007 ORTHO05D000017 2.7e-09 66.6 90 44.4
Nitab4.5_0000519g0140 Nicotiana tabacum HOM05D000007 ORTHO05D000017 2.7e-09 66.6 117 35.9
PGSC0003DMG400040257 Solanum tuberosum HOM05D000007 ORTHO05D000017 2.7e-09 66.6 87 43.7
PGSC0003DMG400022273 Solanum tuberosum HOM05D000007 ORTHO05D000949 3.5e-09 66.2 106 40.6
CAN.G1134.13 Capsicum annuum HOM05D000176 ORTHO05D000017 6.0e-09 65.5 139 36.0
CAN.G575.75 Capsicum annuum HOM05D000007 ORTHO05D000017 6.0e-09 65.5 105 41.9
Nitab4.5_0000334g0270 Nicotiana tabacum HOM05D000007 ORTHO05D000017 6.0e-09 65.5 111 41.4
Nitab4.5_0002499g0110 Nicotiana tabacum HOM05D000007 ORTHO05D000017 6.0e-09 65.5 111 35.1
Nitab4.5_0002499g0150 Nicotiana tabacum HOM05D000007 ORTHO05D000017 6.0e-09 65.5 132 33.3
Solyc02g091570.1 Solanum lycopersicum HOM05D000007 ORTHO05D000017 6.0e-09 65.5 75 42.7
CAN.G575.76 Capsicum annuum HOM05D000007 ORTHO05D000017 1.8e-08 63.9 82 43.9
PGSC0003DMG400007431 Solanum tuberosum HOM05D000007 ORTHO05D000017 2.3e-08 63.5 96 41.7
CAN.G1121.9 Capsicum annuum HOM05D000007 ORTHO05D000017 5.1e-08 62.4 62 50.0
CAN.G1186.44 Capsicum annuum HOM05D000007 ORTHO05D000017 5.1e-08 62.4 138 32.6
CAN.G484.2 Capsicum annuum HOM05D000007 ORTHO05D000017 5.1e-08 62.4 84 47.6
CAN.G520.23 Capsicum annuum HOM05D000007 ORTHO05D000017 5.1e-08 62.4 60 55.0
Nitab4.5_0001450g0080 Nicotiana tabacum HOM05D000007 ORTHO05D000017 8.7e-08 61.6 113 36.3
CAN.G321.65 Capsicum annuum HOM05D000007 ORTHO05D000017 1.1e-07 61.2 103 37.9
FAN14G2810 Fragaria x ananassa HOM05D000007 ORTHO05D000017 1.1e-07 61.2 85 43.5
Nitab4.5_0002050g0180 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.1e-07 61.2 107 35.5
PSO063G2578 Papaver somniferum HOM05D000007 ORTHO05D000017 1.1e-07 61.2 64 46.9
Peaxi162Scf00776g00029 Petunia axillaris HOM05D000007 ORTHO05D000521 1.1e-07 61.2 69 43.5
CAN.G206.121 Capsicum annuum HOM05D000007 ORTHO05D000017 1.5e-07 60.8 61 50.8
FAN02G3500 Fragaria x ananassa HOM05D000007 ORTHO05D000017 1.5e-07 60.8 122 32.8
Solyc02g094080.1 Solanum lycopersicum HOM05D000007 ORTHO05D000017 1.5e-07 60.8 109 34.9
CAN.G1036.10 Capsicum annuum HOM05D000007 ORTHO05D000039 1.9e-07 60.5 80 40.0
FvH4_6g40090 Fragaria vesca HOM05D000007 ORTHO05D000017 2.5e-07 60.1 86 41.9
Nitab4.5_0001774g0020 Nicotiana tabacum HOM05D000007 ORTHO05D000521 2.5e-07 60.1 69 43.5
RcHm_v2.0_Chr1g0347341 Rosa chinensis HOM05D000007 ORTHO05D000017 2.5e-07 60.1 98 35.7
CAN.G473.136 Capsicum annuum HOM05D000007 ORTHO05D000017 4.3e-07 59.3 100 38.0
FvH4_6g40070 Fragaria vesca HOM05D000027 ORTHO05D000066 4.3e-07 59.3 60 46.7
FvH4_6g40272 Fragaria vesca HOM05D000007 ORTHO05D000017 4.3e-07 59.3 122 32.0
FAN09G0423 Fragaria x ananassa HOM05D000007 ORTHO05D000017 4.3e-07 59.3 60 46.7
FAN14G1591 Fragaria x ananassa HOM05D000007 ORTHO05D000017 4.3e-07 59.3 60 46.7
RcHm_v2.0_Chr5g0031751 Rosa chinensis HOM05D000007 ORTHO05D000039 4.3e-07 59.3 83 39.8
SalBow4G3067 Salvia bowleyana HOM05D000007 ORTHO05D000017 4.3e-07 59.3 121 31.4
Sopen07g024200 Solanum pennellii HOM05D000007 ORTHO05D000039 4.3e-07 59.3 69 42.0
Nitab4.5_0001701g0040 Nicotiana tabacum HOM05D000007 ORTHO05D000039 5.6e-07 58.9 96 34.4
PSO063G2997 Papaver somniferum HOM05D000007 ORTHO05D000017 7.4e-07 58.5 72 36.1
PGR142G3580 Punica granatum HOM05D000007 ORTHO05D000017 9.6e-07 58.2 67 47.8
PSO832G0828 Papaver somniferum HOM05D000007 ORTHO05D000017 1.3e-06 57.8 101 35.6
RcHm_v2.0_Chr2g0154681 Rosa chinensis HOM05D000007 ORTHO05D000017 1.3e-06 57.8 59 47.5
RcHm_v2.0_Chr2g0154711 Rosa chinensis HOM05D000007 ORTHO05D000017 1.3e-06 57.8 61 45.9
SalBow4G0613 Salvia bowleyana HOM05D000007 ORTHO05D000017 1.3e-06 57.8 79 39.2
PGSC0003DMG400023037 Solanum tuberosum HOM05D008583 ORTHO05D000017 1.3e-06 57.8 55 49.1
CAN.G1134.16 Capsicum annuum HOM05D020669 ORTHO05D015553 1.6e-06 57.4 75 42.7
FvH4_3g18231 Fragaria vesca HOM05D000007 ORTHO05D000017 1.6e-06 57.4 63 42.9
MD04G1162000 Malus domestica HOM05D000007 ORTHO05D000017 2.1e-06 57.0 76 39.5
CAN.G1799.7 Capsicum annuum HOM05D000007 ORTHO05D000017 2.8e-06 56.6 86 39.5
FvH4_6g33751 Fragaria vesca HOM05D000007 ORTHO05D000017 2.8e-06 56.6 75 36.0
PGSC0003DMG400042854 Solanum tuberosum HOM05D000007 ORTHO05D000017 2.8e-06 56.6 105 34.3
vmacro19993 Vaccinium macrocarpon HOM05D000007 ORTHO05D000017 2.8e-06 56.6 80 40.0
CAN.G375.46 Capsicum annuum HOM05D000007 ORTHO05D000017 3.6e-06 56.2 81 44.4
CiPaw.07G038000 Carya illinoinensis HOM05D000007 ORTHO05D000017 3.6e-06 56.2 81 35.8
FAN25G0241 Fragaria x ananassa HOM05D000007 ORTHO05D000017 3.6e-06 56.2 63 42.9
FvH4_3g33320 Fragaria vesca HOM05D000007 ORTHO05D000017 4.8e-06 55.8 96 33.3
FAN05G3133 Fragaria x ananassa HOM05D000007 ORTHO05D000017 4.8e-06 55.8 60 43.3
FAN16G1154 Fragaria x ananassa HOM05D000007 ORTHO05D000017 4.8e-06 55.8 73 38.4
Nitab4.5_0001290g0170 Nicotiana tabacum HOM05D000007 ORTHO05D000017 4.8e-06 55.8 61 50.8
Nitab4.5_0001659g0120 Nicotiana tabacum HOM05D000007 ORTHO05D000017 4.8e-06 55.8 44 59.1
Prupe.6G096300 Prunus persica HOM05D000007 ORTHO05D000039 4.8e-06 55.8 66 40.9
CAN.G1799.4 Capsicum annuum HOM05D000007 ORTHO05D000017 6.2e-06 55.5 102 37.3
CAN.G623.46 Capsicum annuum HOM05D000007 ORTHO05D000017 6.2e-06 55.5 75 44.0
CAN.G1565.5 Capsicum annuum HOM05D000007 ORTHO05D000017 8.1e-06 55.1 44 56.8
CARHR108200 Cardamine hirsuta HOM05D000209 ORTHO05D000129 8.1e-06 55.1 79 39.2
Nitab4.5_0001728g0030 Nicotiana tabacum HOM05D000007 ORTHO05D000017 8.1e-06 55.1 73 47.9
PGSC0003DMG400021641 Solanum tuberosum HOM05D000007 ORTHO05D000017 8.1e-06 55.1 59 40.7


User provided reference genes

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