Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001031g0160 Nicotiana tabacum HOM05D004407 ORTHO05D005074 1.4e-124 449.5 212 100.0
Nitab4.5_0001863g0220 Nicotiana tabacum HOM05D004407 ORTHO05D005074 7.0e-116 420.6 214 94.4
Sopen02g038350 Solanum pennellii HOM05D004407 ORTHO05D005074 3.0e-82 308.9 210 75.7
PGSC0003DMG400012626 Solanum tuberosum HOM05D004407 ORTHO05D005074 5.1e-82 308.1 210 74.8
Solyc02g093710.1 Solanum lycopersicum HOM05D004407 ORTHO05D005074 3.6e-80 302.0 210 74.3
CAN.G473.50 Capsicum annuum HOM05D004407 ORTHO05D005074 7.6e-78 294.3 211 72.5
Nn4g22470 Nelumbo nucifera HOM05D004407 ORTHO05D005074 3.0e-58 229.2 212 57.5
QL02p073303 Quercus lobata HOM05D004407 ORTHO05D005074 1.5e-57 226.9 211 58.3
QL02p073308 Quercus lobata HOM05D004407 ORTHO05D005074 1.5e-57 226.9 211 58.3
Manes.15G155400 Manihot esculenta HOM05D004407 ORTHO05D005074 2.5e-57 226.1 230 54.8
Cc07_g00320 Coffea canephora HOM05D004407 ORTHO05D005074 4.8e-56 221.9 224 56.2
TAR622G1038 Trochodendron aralioides HOM05D004407 ORTHO05D005074 1.8e-55 219.9 214 57.0
Peaxi162Scf00420g00249 Petunia axillaris HOM05D004407 ORTHO05D005074 2.0e-54 216.5 213 59.2
Oeu054661.1 Olea europaea HOM05D004407 ORTHO05D005074 2.6e-54 216.1 212 57.1
CSS0009144 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 5.9e-54 214.9 210 51.9
Thecc.04G026300 Theobroma cacao HOM05D004407 ORTHO05D005074 5.9e-54 214.9 215 54.9
Prupe.3G298600 Prunus persica HOM05D004407 ORTHO05D005074 7.7e-54 214.5 210 53.8
Gorai.012G091100 Gossypium raimondii HOM05D004407 ORTHO05D005074 1.9e-52 209.9 215 51.6
Haze_14799 Corylus avellana HOM05D002760 ORTHO05D003169 7.2e-52 208.0 212 55.2
Gohir.D04G080420 Gossypium hirsutum HOM05D004407 ORTHO05D005074 1.2e-51 207.2 215 51.2
MD09G1018600 Malus domestica HOM05D004407 ORTHO05D005074 1.6e-51 206.8 219 53.9
CANSAT64G2558 Cannabis sativa HOM05D004407 ORTHO05D005074 2.7e-51 206.1 220 55.9
Thecc.04G026400 Theobroma cacao HOM05D004407 ORTHO05D005074 3.6e-51 205.7 228 50.9
CiPaw.03G049400 Carya illinoinensis HOM05D004407 ORTHO05D005074 4.6e-51 205.3 213 53.1
Rhsim10G0012400 Rhododendron simsii HOM05D004407 ORTHO05D005074 7.9e-51 204.5 223 52.5
Actinidia05950 Actinidia chinensis HOM05D004407 ORTHO05D005074 2.3e-50 203.0 211 54.0
Ciclev10017684m.g Citrus clementina HOM05D004407 ORTHO05D005074 3.9e-50 202.2 225 51.6
FvH4_6g52330 Fragaria vesca HOM05D004407 ORTHO05D005074 5.1e-50 201.8 212 52.8
TWI36G1179 Tripterygium wilfordii HOM05D004407 ORTHO05D005074 5.7e-49 198.4 214 54.7
Nn3g16588 Nelumbo nucifera HOM05D004407 ORTHO05D005074 7.4e-49 198.0 214 53.3
Duzib187G1586 Durio zibethinus HOM05D004407 ORTHO05D005074 3.7e-48 195.7 212 50.0
PGR083G0262 Punica granatum HOM05D004407 ORTHO05D005074 6.3e-48 194.9 221 52.9
FAN05G1079 Fragaria x ananassa HOM05D004407 ORTHO05D005074 5.3e-47 191.8 211 50.7
MBI11_g29154_MAGBIO Magnolia biondii HOM05D004407 ORTHO05D005074 6.9e-47 191.4 210 51.0
MD17G1019100 Malus domestica HOM05D004407 ORTHO05D005074 2.0e-46 189.9 212 50.5
Gohir.A09G032000 Gossypium hirsutum HOM05D004407 ORTHO05D005074 3.4e-46 189.1 221 49.8
Eucgr.J02274 Eucalyptus grandis HOM05D004407 ORTHO05D005074 5.0e-45 185.3 212 50.0
Potri.001G336200 Populus trichocarpa HOM05D004407 ORTHO05D005074 1.9e-44 183.3 213 49.3
Dinv25704 Davidia involucrata HOM05D004407 ORTHO05D005074 3.2e-44 182.6 212 50.9
Duzib264G0535 Durio zibethinus HOM05D004407 ORTHO05D005074 9.4e-44 181.0 282 41.5
Sabra16G0217100 Salix brachista HOM05D004407 ORTHO05D005074 2.1e-43 179.9 215 47.9
Cpa.g.sc130.51 Carica papaya HOM05D004407 ORTHO05D005074 1.8e-42 176.8 213 48.4
Rhsim10G0012300 Rhododendron simsii HOM05D004407 ORTHO05D005074 2.3e-42 176.4 202 48.5
BolC4t26352H Brassica oleracea HOM05D004407 ORTHO05D005074 3.0e-42 176.0 227 48.5
Gorai.006G037000 Gossypium raimondii HOM05D004407 ORTHO05D005074 3.0e-42 176.0 214 46.3
BraA04t17032Z Brassica rapa HOM05D004407 ORTHO05D005074 3.9e-42 175.6 236 46.2
Sed0027888 Sechium edule HOM05D004407 ORTHO05D005074 6.7e-42 174.9 215 52.1
Aqoxy3G01382 Aquilegia oxysepala HOM05D004407 ORTHO05D005074 4.4e-41 172.2 212 48.1
A04p13730 Brassica napus HOM05D004407 ORTHO05D005074 2.2e-40 169.9 231 45.0
Duzib187G1582 Durio zibethinus HOM05D004407 ORTHO05D005074 2.2e-40 169.9 232 45.3
CARHR213820 Cardamine hirsuta HOM05D004407 ORTHO05D005074 2.8e-40 169.5 233 47.2
Carub.0007s3479 Capsella rubella HOM05D004407 ORTHO05D005074 4.8e-40 168.7 222 45.5
RcHm_v2.0_Chr2g0173921 Rosa chinensis HOM05D004407 ORTHO05D005074 2.4e-39 166.4 186 51.6
THA.LOC104825308 Tarenaya hassleriana HOM05D004407 ORTHO05D005074 7.0e-39 164.9 225 47.1
TAR625G1142 Trochodendron aralioides HOM05D004407 ORTHO05D005074 1.6e-38 163.7 126 63.5
Thhalv10028148m.g Eutrema salsugineum HOM05D004407 ORTHO05D005074 3.5e-38 162.5 218 44.0
C04p47510 Brassica napus HOM05D004407 ORTHO05D005074 7.7e-38 161.4 231 43.3
Hma1.2p1_1484F.1_g286420 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 2.2e-37 159.8 130 62.3
Aqoxy4G01774 Aquilegia oxysepala HOM05D004407 ORTHO05D005074 2.9e-37 159.5 252 43.3
Aqoxy5G03597 Aquilegia oxysepala HOM05D004407 ORTHO05D005074 2.9e-37 159.5 252 43.3
Hma1.2p1_0818F.1_g223550 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 3.8e-37 159.1 130 61.5
Hma1.2p1_0818F.1_g223510 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 6.5e-37 158.3 130 61.5
Hma1.2p1_0279F.1_g112130 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 8.5e-37 157.9 118 65.3
PGSC0003DMG400006921 Solanum tuberosum HOM05D004407 ORTHO05D005074 8.5e-37 157.9 137 61.3
Aa31LG2G5400 Aethionema arabicum HOM05D004407 ORTHO05D005074 1.1e-36 157.5 220 45.9
EL10Ac4g07679 Beta vulgaris HOM05D004407 ORTHO05D005074 1.1e-36 157.5 124 62.9
THA.LOC104805351 Tarenaya hassleriana HOM05D004407 ORTHO05D005074 1.1e-36 157.5 135 59.3
Sp7g01180 Schrenkiella parvula HOM05D004407 ORTHO05D005074 2.5e-36 156.4 131 59.5
Sc03g0006970 Simmondsia chinensis HOM05D004407 ORTHO05D005074 3.2e-36 156.0 220 45.0
Potri.001G338100 Populus trichocarpa HOM05D004407 ORTHO05D005074 4.2e-36 155.6 126 59.5
DCAR_015072 Daucus carota HOM05D004407 ORTHO05D005074 7.2e-36 154.8 137 56.9
Glyma.02G190900 Glycine max HOM05D004407 ORTHO05D005074 9.4e-36 154.5 168 52.4
Sc03g0006940 Simmondsia chinensis HOM05D004407 ORTHO05D005074 9.4e-36 154.5 220 45.0
Sopen02g017070 Solanum pennellii HOM05D000413 ORTHO05D005074 9.4e-36 154.5 137 60.6
Hma1.2p1_1484F.1_g286390 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 1.2e-35 154.1 130 60.0
DCAR_015074 Daucus carota HOM05D004407 ORTHO05D005074 6.1e-35 151.8 126 57.1
Hma1.2p1_0818F.1_g223530 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 6.1e-35 151.8 133 59.4
Hma1.2p1_1484F.1_g286386 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 6.1e-35 151.8 133 59.4
Hma1.2p1_1484F.1_g286410 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 6.1e-35 151.8 133 60.2
Ah.06g182110 Amaranthus hybridus HOM05D004407 ORTHO05D005074 8.0e-35 151.4 226 39.8
Prupe.3G298500 Prunus persica HOM05D004407 ORTHO05D005074 2.3e-34 149.8 127 59.1
GSVIVG01003970001 Vitis vinifera HOM05D004407 ORTHO05D005074 2.3e-34 149.8 103 68.0
CANSAT64G1834 Cannabis sativa HOM05D004407 ORTHO05D005074 4.0e-34 149.1 139 57.6
Aa31LG9G940 Aethionema arabicum HOM05D004407 ORTHO05D005074 5.2e-34 148.7 215 44.2
Hma1.2p1_0818F.1_g223560 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 5.2e-34 148.7 133 58.6
VMungo1383G1696 Vigna mungo HOM05D004407 ORTHO05D005074 8.8e-34 147.9 127 58.3
Gohir.A05G342300 Gossypium hirsutum HOM05D004407 ORTHO05D005074 2.6e-33 146.4 212 41.5
PSO832G4071 Papaver somniferum HOM05D004407 ORTHO05D005074 2.6e-33 146.4 210 44.3
Phvul.008G156900 Phaseolus vulgaris HOM05D004407 ORTHO05D005074 3.3e-33 146.0 137 55.5
Sed0005342 Sechium edule HOM05D004407 ORTHO05D005074 7.5e-33 144.8 211 41.7
MSTRG.24058 Avicennia marina HOM05D004407 ORTHO05D005074 2.2e-32 143.3 138 55.1
Migut.K01432 Erythranthe guttata HOM05D004407 ORTHO05D005074 2.2e-32 143.3 216 42.1
PSO017G7028 Papaver somniferum HOM05D004407 ORTHO05D005074 2.2e-32 143.3 210 42.4
PSO063G0264 Papaver somniferum HOM05D004407 ORTHO05D005074 2.2e-32 143.3 135 55.6
CsaV3_5G026800 Cucumis sativus L. HOM05D004407 ORTHO05D005074 3.7e-32 142.5 220 43.6
ClCG09G019590 Citrullus lanatus HOM05D004407 ORTHO05D005074 4.8e-32 142.1 221 41.6
MELO3C021614.2 Cucumis melo HOM05D004407 ORTHO05D005074 6.3e-32 141.7 86 70.9
Ca_03872_v3 Cicer arietinum L. HOM05D004407 ORTHO05D005074 1.2e-30 137.5 209 44.5
PSO407G0367 Papaver somniferum HOM05D004407 ORTHO05D005074 1.2e-30 137.5 142 53.5
Sed0009704 Sechium edule HOM05D004407 ORTHO05D005074 2.7e-30 136.3 211 39.8
PGR083G0848 Punica granatum HOM05D004407 ORTHO05D005074 3.5e-30 136.0 152 52.0
FAN14G0353 Fragaria x ananassa HOM05D004407 ORTHO05D005074 4.5e-30 135.6 103 65.0
Thhalv10028030m.g Eutrema salsugineum HOM05D004407 ORTHO05D005074 7.7e-30 134.8 217 39.6
Medtr1g051195 Medicago truncatula HOM05D004407 ORTHO05D005074 1.3e-29 134.0 167 46.1
TAR374G1728 Trochodendron aralioides HOM05D004407 ORTHO05D005074 1.7e-29 133.7 202 44.1
Psat0s1368g0080 Pisum sativum HOM05D004407 ORTHO05D005074 6.5e-29 131.7 160 47.5
AT5G40690 Arabidopsis thaliana HOM05D004407 ORTHO05D005074 8.5e-29 131.3 216 40.3
AL7G49050 Arabidopsis lyrata HOM05D004407 ORTHO05D005074 1.5e-28 130.6 217 40.6
PGR083G1149 Punica granatum HOM05D004407 ORTHO05D005074 1.9e-28 130.2 134 52.2
Gohir.A11G065600 Gossypium hirsutum HOM05D004407 ORTHO05D005074 3.2e-28 129.4 213 36.6
AUR62020325 Chenopodium quinoa HOM05D004407 ORTHO05D005074 9.4e-28 127.9 238 37.8
Migut.H00046 Erythranthe guttata HOM05D004407 ORTHO05D005074 9.4e-28 127.9 138 55.1
Sabra16G0218800 Salix brachista HOM05D000111 ORTHO05D000134 1.2e-27 127.5 136 50.0
COL.COLO4_29257 Corchorus olitorius HOM05D004407 ORTHO05D005074 2.7e-27 126.3 95 63.2
BcaB02g07933 Brassica carinata HOM05D004407 ORTHO05D005074 1.8e-26 123.6 215 36.7
Gorai.007G074900 Gossypium raimondii HOM05D004407 ORTHO05D005074 1.2e-25 120.9 230 35.2
TPR.G1105 Trifolium pratense HOM05D004407 ORTHO05D005074 5.7e-25 118.6 136 49.3
SGA_v2.0_scaffold47G17536 Striga asiatica HOM05D004407 ORTHO05D005074 9.8e-25 117.9 210 36.2
TPR.G1219 Trifolium pratense HOM05D004407 ORTHO05D005074 1.7e-24 117.1 84 66.7
Gohir.D11G069800 Gossypium hirsutum HOM05D004407 ORTHO05D005074 2.2e-24 116.7 214 36.4
Lsat_1_v5_gn_2_93521 Lactuca sativa HOM05D004407 ORTHO05D005074 2.8e-24 116.3 136 52.2
BcaB07g31285 Brassica carinata HOM05D004407 ORTHO05D005074 1.4e-23 114.0 84 60.7
ECA238G3732 Erigeron canadensis HOM05D004407 ORTHO05D005074 1.4e-23 114.0 199 39.7
A09p16650 Brassica napus HOM05D006758 ORTHO05D008326 9.1e-23 111.3 84 59.5
BraA09t37304Z Brassica rapa HOM05D006758 ORTHO05D008326 9.1e-23 111.3 84 59.5
BcaC04g22350 Brassica carinata HOM05D004407 ORTHO05D005074 1.2e-22 110.9 84 58.3
C09p20260 Brassica napus HOM05D006758 ORTHO05D008326 1.2e-22 110.9 84 58.3
BolC9t54931H Brassica oleracea HOM05D006758 ORTHO05D008326 1.2e-22 110.9 84 58.3
ECA238G3518 Erigeron canadensis HOM05D004407 ORTHO05D005074 8.5e-21 104.8 157 42.7
A05p02490 Brassica napus HOM05D004407 ORTHO05D005074 1.1e-20 104.4 136 43.4
BraA05t19242Z Brassica rapa HOM05D004407 ORTHO05D005074 1.1e-20 104.4 136 43.4
C04p02920 Brassica napus HOM05D004407 ORTHO05D005074 1.5e-20 104.0 141 44.7
BolC4t21933H Brassica oleracea HOM05D004407 ORTHO05D005074 1.5e-20 104.0 141 44.7
CARHR025870 Cardamine hirsuta HOM05D004407 ORTHO05D005074 1.5e-20 104.0 140 44.3
HanXRQChr14g0451031 Helianthus annuus HOM05D004407 ORTHO05D005074 1.5e-20 104.0 167 42.5
A05p02450 Brassica napus HOM05D004407 ORTHO05D005074 1.9e-20 103.6 141 45.4
BraA05t19239Z Brassica rapa HOM05D004407 ORTHO05D005074 7.2e-20 101.7 138 44.2
HanXRQChr09g0255761 Helianthus annuus HOM05D004407 ORTHO05D005074 9.4e-20 101.3 86 57.0
A05p02480 Brassica napus HOM05D004407 ORTHO05D005074 2.7e-19 99.8 128 43.8
C04p02950 Brassica napus HOM05D004407 ORTHO05D005074 2.7e-19 99.8 137 43.8
BolC4t21935H Brassica oleracea HOM05D004407 ORTHO05D005074 2.7e-19 99.8 137 43.8
BraA05t19241Z Brassica rapa HOM05D004407 ORTHO05D005074 2.7e-19 99.8 128 43.8
BcaNung02830 Brassica carinata HOM05D004407 ORTHO05D005074 6.1e-19 98.6 141 44.0
Solyc02g067935.1 Solanum lycopersicum HOM05D004407 ORTHO05D005074 8.0e-19 98.2 74 62.2
BcaNung02832 Brassica carinata HOM05D004407 ORTHO05D005074 2.3e-18 96.7 86 53.5
A05p02470 Brassica napus HOM05D004407 ORTHO05D005074 2.3e-18 96.7 86 54.7
C04p02940 Brassica napus HOM05D004407 ORTHO05D005074 2.3e-18 96.7 139 43.2
BolC4t21934H Brassica oleracea HOM05D004407 ORTHO05D005074 2.3e-18 96.7 139 43.2
Thhalv10019315m.g Eutrema salsugineum HOM05D004407 ORTHO05D005074 1.5e-17 94.0 139 41.7
BraA05t19240Z Brassica rapa HOM05D004407 ORTHO05D005074 9.8e-17 91.3 86 52.3
PSO782G3492 Papaver somniferum HOM05D004407 ORTHO05D005074 3.7e-16 89.4 251 33.9
unitig_747.g21864 Utricularia gibba HOM05D004407 ORTHO05D005074 4.1e-15 85.9 216 34.7
Sp4g23980 Schrenkiella parvula HOM05D004407 ORTHO05D005074 1.6e-14 84.0 131 41.2
ECA232G1846 Erigeron canadensis HOM05D004407 ORTHO05D005074 2.0e-14 83.6 198 34.8
SGA_v2.0_scaffold154G37145 Striga asiatica HOM05D002760 ORTHO05D003169 6.6e-13 78.6 48 70.8
HPP92_009915 Vanilla planifolia HOM05D004407 ORTHO05D005074 6.6e-13 78.6 84 47.6
SEGI_17639 Sequoiadendron giganteum HOM05D050174 ORTHO05D005074 2.5e-12 76.6 221 33.9
BcaNung02831 Brassica carinata HOM05D004407 ORTHO05D005074 5.6e-12 75.5 124 39.5
AT2G41730 Arabidopsis thaliana HOM05D004407 ORTHO05D005074 7.3e-12 75.1 86 47.7
HPP92_009916 Vanilla planifolia HOM05D004407 ORTHO05D005074 7.3e-12 75.1 86 40.7
CANSAT64G1789 Cannabis sativa HOM05D004407 ORTHO05D005074 1.6e-11 73.9 130 41.5
AT5G24640 Arabidopsis thaliana HOM05D004407 ORTHO05D005074 3.6e-11 72.8 86 45.3
Nitab4.5_0000040g0600 Nicotiana tabacum HOM05D004407 ORTHO05D005074 4.7e-11 72.4 136 41.2
Nitab4.5_0005414g0060 Nicotiana tabacum HOM05D004407 ORTHO05D005074 1.4e-10 70.9 145 38.6
Sp2g16550 Schrenkiella parvula HOM05D013829 ORTHO05D015952 2.3e-10 70.1 214 32.7
AL4G40040 Arabidopsis lyrata HOM05D004407 ORTHO05D005074 1.2e-09 67.8 86 44.2
Medtr4g061650 Medicago truncatula HOM05D004407 ORTHO05D005074 2.6e-09 66.6 53 64.2
Peaxi162Scf00080g00175 Petunia axillaris HOM05D004407 ORTHO05D005074 1.7e-08 63.9 90 46.7
Lsat_1_v5_gn_4_184741 Lactuca sativa HOM05D004407 ORTHO05D005074 4.9e-08 62.4 87 43.7
CARHR148680 Cardamine hirsuta HOM05D013829 ORTHO05D015952 6.4e-08 62.0 128 35.2
BcaC06g33826 Brassica carinata HOM05D013829 ORTHO05D015952 1.4e-07 60.8 213 28.2
BcaNung05649 Brassica carinata HOM05D013829 ORTHO05D015952 1.2e-06 57.8 49 57.1
Mapoly0030s0024 Marchantia polymorpha HOM05D034947 ORTHO05D036670 1.2e-06 57.8 67 49.3
Mapoly0030s0028 Marchantia polymorpha HOM05D034947 ORTHO05D036670 1.2e-06 57.8 67 49.3
Aqoxy5G03598 Aquilegia oxysepala HOM05D004407 ORTHO05D005074 3.5e-06 56.2 71 47.9
C07p36420 Brassica napus HOM05D013829 ORTHO05D015952 5.9e-06 55.5 215 29.8
Carub.0005s0566 Capsella rubella HOM05D013829 ORTHO05D015952 5.9e-06 55.5 221 30.8


User provided reference genes

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