Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001029g0070 Nicotiana tabacum HOM05D003701 ORTHO05D004771 5.5e-270 933.7 470 100.0
Nitab4.5_0005490g0010 Nicotiana tabacum HOM05D003701 ORTHO05D004771 2.6e-243 845.1 470 93.0
PGSC0003DMG400024392 Solanum tuberosum HOM05D003701 ORTHO05D004771 2.7e-232 808.5 470 88.5
Sopen04g019270 Solanum pennellii HOM05D003701 ORTHO05D004771 5.7e-227 790.8 470 87.4
Peaxi162Scf00747g00122 Petunia axillaris HOM05D003701 ORTHO05D004771 2.2e-226 788.9 469 87.0
Solyc04g049350.4 Solanum lycopersicum HOM05D003701 ORTHO05D004771 6.3e-226 787.3 470 87.2
CAN.G186.45 Capsicum annuum HOM05D003701 ORTHO05D004771 7.8e-216 753.8 470 84.0
PGSC0003DMG400016016 Solanum tuberosum HOM05D003701 ORTHO05D004771 3.9e-215 751.5 470 84.0
Sopen04g004770 Solanum pennellii HOM05D003701 ORTHO05D004771 3.4e-211 738.4 465 82.6
Solyc04g009620.4 Solanum lycopersicum HOM05D003701 ORTHO05D004771 2.4e-209 732.3 465 82.4
SGA_v2.0_scaffold51G18675 Striga asiatica HOM05D003701 ORTHO05D004771 5.6e-206 721.1 466 79.8
Migut.F01774 Erythranthe guttata HOM05D003701 ORTHO05D004771 1.2e-203 713.4 470 79.6
MSTRG.8153 Avicennia marina HOM05D003701 ORTHO05D004771 2.0e-203 712.6 470 78.3
MSTRG.367 Avicennia marina HOM05D003701 ORTHO05D004771 4.4e-203 711.4 470 78.9
Dinv11780 Davidia involucrata HOM05D003701 ORTHO05D004771 1.3e-199 699.9 473 77.2
CSS0025729 Camellia sinensis var. sinensis HOM05D003701 ORTHO05D004771 2.5e-198 695.7 470 76.4
GSVIVG01016288001 Vitis vinifera HOM05D003701 ORTHO05D004771 8.1e-197 690.6 465 76.3
TAR623G1268 Trochodendron aralioides HOM05D003701 ORTHO05D004771 5.8e-195 684.5 474 75.9
Hma1.2p1_1004F.1_g246800 Hydrangea macrophylla HOM05D003701 ORTHO05D004771 7.6e-195 684.1 473 75.9
vmacro04876 Vaccinium macrocarpon HOM05D003701 ORTHO05D004771 1.3e-194 683.3 568 66.4
Actinidia38848 Actinidia chinensis HOM05D003701 ORTHO05D004771 2.2e-194 682.6 470 75.7
Sc09g0006470 Simmondsia chinensis HOM05D003701 ORTHO05D004771 6.4e-194 681.0 470 75.7
DCAR_015315 Daucus carota HOM05D003701 ORTHO05D004771 7.1e-193 677.6 472 76.3
TAR633G1876 Trochodendron aralioides HOM05D003701 ORTHO05D004771 2.1e-192 676.0 458 75.8
Lsat_1_v5_gn_2_114381 Lactuca sativa HOM05D003701 ORTHO05D004771 2.7e-192 675.6 466 76.2
Atru.chr12.740 Acer truncatum HOM05D003701 ORTHO05D004771 3.5e-192 675.2 461 77.0
Sc06g0004590 Simmondsia chinensis HOM05D003701 ORTHO05D004771 7.8e-192 674.1 470 74.7
Rhsim09G0152400 Rhododendron simsii HOM05D003701 ORTHO05D004771 1.3e-191 673.3 528 68.9
HanXRQChr09g0249701 Helianthus annuus HOM05D003701 ORTHO05D004771 1.5e-190 669.8 471 74.1
Manes.10G045200 Manihot esculenta HOM05D003701 ORTHO05D004771 1.9e-190 669.5 473 73.6
Glyma.20G179500 Glycine max HOM05D003701 ORTHO05D004771 2.5e-190 669.1 463 75.2
Hund12041 Selenicereus undatus HOM05D003701 ORTHO05D004771 3.3e-190 668.7 468 74.8
Ah.06g192010 Amaranthus hybridus HOM05D003701 ORTHO05D004771 5.6e-190 667.9 467 74.1
arahy.Tifrunner.gnm1.ann1.X76XU5 Arachis hypogaea HOM05D003701 ORTHO05D004771 1.2e-189 666.8 425 80.0
arahy.Tifrunner.gnm1.ann1.V7IKH4 Arachis hypogaea HOM05D003701 ORTHO05D004771 1.6e-189 666.4 425 80.0
Thhalv10011486m.g Eutrema salsugineum HOM05D003701 ORTHO05D004771 2.1e-189 666.0 455 74.7
CARHR038850 Cardamine hirsuta HOM05D003701 ORTHO05D004771 2.8e-189 665.6 452 75.2
CiPaw.02G174300 Carya illinoinensis HOM05D003701 ORTHO05D004771 3.6e-189 665.2 458 75.1
VMungo0720G1162 Vigna mungo HOM05D003701 ORTHO05D004771 3.6e-189 665.2 457 76.4
Duzib106G0278 Durio zibethinus HOM05D003701 ORTHO05D004771 6.2e-189 664.5 463 73.0
AT1G48850 Arabidopsis thaliana HOM05D003701 ORTHO05D004771 1.4e-188 663.3 454 74.7
AL1G55580 Arabidopsis lyrata HOM05D003701 ORTHO05D004771 1.8e-188 662.9 454 74.9
HanXRQChr15g0496661 Helianthus annuus HOM05D003701 ORTHO05D004771 1.8e-188 662.9 460 75.4
Carub.0001s3800 Capsella rubella HOM05D003701 ORTHO05D004771 2.4e-188 662.5 454 74.7
AUR62041045 Chenopodium quinoa HOM05D003701 ORTHO05D004771 2.4e-188 662.5 467 74.7
A05p20860 Brassica napus HOM05D003701 ORTHO05D004771 3.1e-188 662.1 452 74.6
BraA05t20991Z Brassica rapa HOM05D003701 ORTHO05D004771 3.1e-188 662.1 452 74.6
Lj1A914T43 Lonicera japonica HOM05D003701 ORTHO05D004771 4.0e-188 661.8 457 76.6
Nn2g13085 Nelumbo nucifera HOM05D003701 ORTHO05D004771 4.0e-188 661.8 460 73.3
Ciclev10031547m.g Citrus clementina HOM05D003701 ORTHO05D004771 5.2e-188 661.4 469 74.4
BcaC05g27549 Brassica carinata HOM05D003701 ORTHO05D004771 9.0e-188 660.6 468 72.9
C05p35350 Brassica napus HOM05D003701 ORTHO05D004771 9.0e-188 660.6 468 72.9
AUR62037661 Chenopodium quinoa HOM05D003701 ORTHO05D004771 9.0e-188 660.6 487 72.1
A08p04400 Brassica napus HOM05D003701 ORTHO05D004771 1.2e-187 660.2 455 74.3
BolC8t47272H Brassica oleracea HOM05D003701 ORTHO05D004771 1.2e-187 660.2 455 74.3
QL08p056106 Quercus lobata HOM05D003701 ORTHO05D004771 1.2e-187 660.2 466 75.5
C08p04710 Brassica napus HOM05D003701 ORTHO05D004771 1.5e-187 659.8 455 74.3
Potri.010G221600 Populus trichocarpa HOM05D003701 ORTHO05D004771 1.5e-187 659.8 459 74.5
BolC5t32248H Brassica oleracea HOM05D003701 ORTHO05D004771 2.0e-187 659.4 464 73.3
BraA08t32466Z Brassica rapa HOM05D003701 ORTHO05D004771 2.6e-187 659.1 455 74.1
BcaB04g17381 Brassica carinata HOM05D003701 ORTHO05D004771 3.4e-187 658.7 470 72.8
Eucgr.G02824 Eucalyptus grandis HOM05D003701 ORTHO05D004771 4.4e-187 658.3 461 72.5
Gohir.A10G206500 Gossypium hirsutum HOM05D003701 ORTHO05D004771 4.4e-187 658.3 457 73.7
BcaC07g37102 Brassica carinata HOM05D003701 ORTHO05D004771 5.8e-187 657.9 455 74.1
ECA232G2521 Erigeron canadensis HOM05D003701 ORTHO05D004771 5.8e-187 657.9 461 75.3
Thecc.10G072600 Theobroma cacao HOM05D003701 ORTHO05D004771 5.8e-187 657.9 462 72.5
Potri.008G040700 Populus trichocarpa HOM05D003701 ORTHO05D004771 7.6e-187 657.5 469 73.6
Ca_10573_v3 Cicer arietinum L. HOM05D003701 ORTHO05D004771 1.7e-186 656.4 467 73.4
Ca_29596_v3 Cicer arietinum L. HOM05D003701 ORTHO05D004771 1.7e-186 656.4 467 73.4
BcaB02g11304 Brassica carinata HOM05D003701 ORTHO05D004771 2.2e-186 656.0 430 76.5
Sp1g35740 Schrenkiella parvula HOM05D003701 ORTHO05D004771 2.2e-186 656.0 468 72.6
Gohir.A05G297100 Gossypium hirsutum HOM05D003701 ORTHO05D004771 2.9e-186 655.6 462 72.3
Gohir.D10G214600 Gossypium hirsutum HOM05D003701 ORTHO05D004771 2.9e-186 655.6 457 73.5
RcHm_v2.0_Chr1g0363491 Rosa chinensis HOM05D003701 ORTHO05D004771 2.9e-186 655.6 461 72.9
TWI74G0111 Tripterygium wilfordii HOM05D003701 ORTHO05D004771 4.9e-186 654.8 463 73.7
TWI74G0263 Tripterygium wilfordii HOM05D003701 ORTHO05D004771 4.9e-186 654.8 463 73.7
Phvul.007G094200 Phaseolus vulgaris HOM05D003701 ORTHO05D004771 6.4e-186 654.4 464 73.7
Sabra08G0027700 Salix brachista HOM05D003701 ORTHO05D004771 8.4e-186 654.1 474 73.4
unitig_899.g14441 Utricularia gibba HOM05D003701 ORTHO05D004771 1.1e-185 653.7 464 73.5
ATR0115G006 Amborella trichopoda HOM05D003701 ORTHO05D004771 1.4e-185 653.3 459 74.7
THA.LOC104827296 Tarenaya hassleriana HOM05D003701 ORTHO05D004771 1.4e-185 653.3 461 74.6
Glyma.10G211400 Glycine max HOM05D003701 ORTHO05D004771 1.9e-185 652.9 457 74.2
FAN10G2919 Fragaria x ananassa HOM05D003701 ORTHO05D004771 2.4e-185 652.5 456 74.1
Gohir.D05G297000 Gossypium hirsutum HOM05D003701 ORTHO05D004771 2.4e-185 652.5 462 72.1
Gorai.009G314200 Gossypium raimondii HOM05D003701 ORTHO05D004771 2.4e-185 652.5 462 72.1
Medtr1g095250 Medicago truncatula HOM05D003701 ORTHO05D004771 7.1e-185 651.0 468 73.1
TPR.G1904 Trifolium pratense HOM05D003701 ORTHO05D004771 7.1e-185 651.0 470 72.1
MD01G1108900 Malus domestica HOM05D003701 ORTHO05D004771 9.3e-185 650.6 466 71.5
FAN03G0046 Fragaria x ananassa HOM05D003701 ORTHO05D004771 2.7e-184 649.0 456 73.9
PSO339G3023 Papaver somniferum HOM05D003701 ORTHO05D004771 4.6e-184 648.3 444 74.8
Lj5g0008768 Lotus japonicus HOM05D003701 ORTHO05D004771 6.0e-184 647.9 465 72.0
PSO063G5795 Papaver somniferum HOM05D003701 ORTHO05D004771 6.0e-184 647.9 444 74.8
Actinidia03057 Actinidia chinensis HOM05D003701 ORTHO05D004771 2.3e-183 646.0 458 73.6
FvH4_7g19670 Fragaria vesca HOM05D003701 ORTHO05D004771 2.3e-183 646.0 456 73.7
EL10Ac2g03249 Beta vulgaris HOM05D003701 ORTHO05D004771 3.9e-183 645.2 468 72.2
FAN06G0474 Fragaria x ananassa HOM05D003701 ORTHO05D004771 3.9e-183 645.2 456 73.5
Aqoxy1G01249 Aquilegia oxysepala HOM05D003701 ORTHO05D004771 5.1e-183 644.8 425 75.8
Lalb_Chr02g0142141 Lupinus albus HOM05D003701 ORTHO05D004771 5.1e-183 644.8 430 76.7
Cpa.g.sc53.71 Carica papaya HOM05D003701 ORTHO05D004771 8.7e-183 644.0 470 72.1
Lalb_Chr06g0162271 Lupinus albus HOM05D003701 ORTHO05D004771 5.6e-182 641.3 451 73.4
arahy.Tifrunner.gnm1.ann1.6FL4NC Arachis hypogaea HOM05D003701 ORTHO05D004771 9.6e-182 640.6 436 75.2
Gorai.011G240200 Gossypium raimondii HOM05D003701 ORTHO05D004771 6.2e-181 637.9 411 77.6
Migut.F01773 Erythranthe guttata HOM05D003701 ORTHO05D004771 4.0e-180 635.2 419 77.3
Aa31LG10G4830 Aethionema arabicum HOM05D003701 ORTHO05D004771 6.9e-180 634.4 472 69.7
MBI10_g04889_MAGBIO Magnolia biondii HOM05D003701 ORTHO05D004771 6.9e-180 634.4 472 70.8
MBI02_g43493_MAGBIO Magnolia biondii HOM05D003701 ORTHO05D004771 9.0e-180 634.0 458 72.3
CsaV3_6G036360 Cucumis sativus L. HOM05D003701 ORTHO05D004771 1.2e-179 633.6 459 72.1
MD07G1175200 Malus domestica HOM05D003701 ORTHO05D004771 3.4e-179 632.1 455 71.2
Sabra10G0171500 Salix brachista HOM05D003701 ORTHO05D004771 5.8e-179 631.3 508 66.7
ClCG08G007450 Citrullus lanatus HOM05D003701 ORTHO05D004771 7.6e-179 630.9 459 71.7
MELO3C019790.2 Cucumis melo HOM05D003701 ORTHO05D004771 1.3e-178 630.2 459 71.7
PGR142G1908 Punica granatum HOM05D003701 ORTHO05D004771 1.7e-178 629.8 456 71.3
FAN01G1080 Fragaria x ananassa HOM05D003701 ORTHO05D004771 3.8e-178 628.6 495 68.3
SalBow4G1339 Salvia bowleyana HOM05D003701 ORTHO05D004771 6.4e-178 627.9 462 71.6
Gorai.011G240100 Gossypium raimondii HOM05D003701 ORTHO05D004771 8.4e-178 627.5 462 70.1
CSS0011231 Camellia sinensis var. sinensis HOM05D003701 ORTHO05D004771 1.9e-177 626.3 460 71.5
Gohir.A10G206400 Gossypium hirsutum HOM05D003701 ORTHO05D004771 1.8e-175 619.8 462 69.0
FAN10G2344 Fragaria x ananassa HOM05D003701 ORTHO05D004771 5.1e-175 618.2 456 71.5
Sed0016616 Sechium edule HOM05D003701 ORTHO05D004771 4.3e-174 615.1 465 69.0
CANSAT56G3258 Cannabis sativa HOM05D003701 ORTHO05D004771 5.6e-174 614.8 472 68.6
CDE04G2332 Ceratophyllum demersum HOM05D003701 ORTHO05D004771 3.7e-173 612.1 461 69.4
Os03g0254800 Oryza sativa ssp. japonica HOM05D003701 ORTHO05D004771 6.2e-173 611.3 413 73.8
CAN.G186.44 Capsicum annuum HOM05D003701 ORTHO05D004771 2.4e-172 609.4 420 72.9
SEGI_31492 Sequoiadendron giganteum HOM05D003701 ORTHO05D004771 6.9e-172 607.8 438 72.1
AagrBONN_evm.TU.Sc2ySwM_369.393 Anthoceros agrestis HOM05D003701 ORTHO05D004771 2.0e-171 606.3 408 76.7
SMO146G0105 Selaginella moellendorffii HOM05D003701 ORTHO05D004771 1.3e-170 603.6 436 72.0
Duzib114G1041 Durio zibethinus HOM05D003701 ORTHO05D004771 3.8e-170 602.1 471 68.2
DCAR_012659 Daucus carota HOM05D003701 ORTHO05D004771 1.9e-169 599.7 408 74.5
Mapoly0007s0052 Marchantia polymorpha HOM05D003701 ORTHO05D004771 1.9e-169 599.7 408 76.0
HPP92_012666 Vanilla planifolia HOM05D003701 ORTHO05D004771 7.1e-169 597.8 433 71.4
GSVIVG01025176001 Vitis vinifera HOM05D003701 ORTHO05D004771 2.3e-167 592.8 428 70.3
Gohir.D05G297025 Gossypium hirsutum HOM05D003701 ORTHO05D004771 5.3e-164 581.6 458 66.8
arahy.Tifrunner.gnm1.ann1.914CGH Arachis hypogaea HOM05D003701 ORTHO05D004771 6.5e-162 574.7 370 78.1
Psat6g184400 Pisum sativum HOM05D003701 ORTHO05D004771 1.8e-159 566.6 396 73.2
Oeu027479.1 Olea europaea HOM05D003701 ORTHO05D004771 2.3e-159 566.2 381 78.0
Oeu007390.4 Olea europaea HOM05D003701 ORTHO05D004771 1.1e-156 557.4 374 77.3
Prupe.2G214400 Prunus persica HOM05D003701 ORTHO05D004771 2.9e-154 549.3 375 74.1
unitig_736.g22517 Utricularia gibba HOM05D003701 ORTHO05D004771 2.5e-150 536.2 455 63.5
Zm00001eb011020 Zea mays HOM05D003701 ORTHO05D004771 7.4e-150 534.6 354 76.0
Dinv31329 Davidia involucrata HOM05D003701 ORTHO05D004771 1.1e-148 530.8 377 75.3
CiPaw.01G273500 Carya illinoinensis HOM05D003701 ORTHO05D004771 4.1e-148 528.9 378 74.1
CANSAT78G2428 Cannabis sativa HOM05D003701 ORTHO05D004771 1.0e-143 514.2 393 65.1
Cre03.g145747 Chlamydomonas reinhardtii HOM05D003701 ORTHO05D004771 3.1e-140 502.7 404 64.6
MCO05G587 Micromonas commoda HOM05D003701 ORTHO05D004771 4.5e-139 498.8 402 64.4
PRCOL_00001179 Prasinoderma coloniale HOM05D003701 ORTHO05D004771 1.7e-138 496.9 394 67.0
Eucgr.J01090 Eucalyptus grandis HOM05D003701 ORTHO05D004771 2.6e-134 483.0 370 68.1
CDE07G1562 Ceratophyllum demersum HOM05D003701 ORTHO05D004771 1.7e-133 480.3 461 57.7
COL.COLO4_23690 Corchorus olitorius HOM05D003701 ORTHO05D004771 4.8e-125 452.2 270 82.2
Zm00001eb398410 Zea mays HOM05D003701 ORTHO05D004771 2.4e-124 449.9 341 66.3
Pp3c1_35940 Physcomitrium patens HOM05D003701 ORTHO05D004771 1.7e-117 427.2 322 69.9
CBR_g41627 Chara braunii HOM05D003701 ORTHO05D004771 1.2e-112 411.0 272 75.7
COL.COLO4_23691 Corchorus olitorius HOM05D003701 ORTHO05D004771 4.7e-112 409.1 281 74.4
Cc09_g02030 Coffea canephora HOM05D003701 ORTHO05D004771 6.6e-98 362.1 241 76.8
Haze_16899 Corylus avellana HOM05D003701 ORTHO05D004771 1.2e-96 357.8 249 74.3
Cc09_g02040 Coffea canephora HOM05D003701 ORTHO05D004771 1.2e-88 331.3 209 80.9
Gohir.D10G214532 Gossypium hirsutum HOM05D003701 ORTHO05D004771 2.3e-87 327.0 253 66.8
Haze_27259 Corylus avellana HOM05D003701 ORTHO05D004771 2.5e-81 307.0 387 45.2
Gohir.D10G214466 Gossypium hirsutum HOM05D003701 ORTHO05D004771 1.7e-77 294.3 205 73.2
Cfa022484 Carpinus fangiana HOM05D003701 ORTHO05D004771 1.1e-76 291.6 383 47.3
SHI12194 Sapria himalayana HOM05D003666 ORTHO05D004770 6.4e-69 265.8 164 78.7
TAR636G0034 Trochodendron aralioides HOM05D003701 ORTHO05D004771 8.4e-61 238.8 196 62.8
TAR636G0416 Trochodendron aralioides HOM05D003701 ORTHO05D004771 8.4e-61 238.8 196 62.8
MSTRG.366 Avicennia marina HOM05D003701 ORTHO05D004771 3.5e-59 233.4 165 72.1
RcHm_v2.0_Chr4g0427911 Rosa chinensis HOM05D003701 ORTHO05D004771 1.1e-55 221.9 229 59.0
FAN12G0728 Fragaria x ananassa HOM05D003701 ORTHO05D004771 2.0e-54 217.6 263 52.5
MD01G1109200 Malus domestica HOM05D003701 ORTHO05D004771 3.7e-40 170.2 154 57.1
Glyma.14G185633 Glycine max HOM05D003701 ORTHO05D004771 1.9e-36 157.9 108 75.9
SMO173G0015 Selaginella moellendorffii HOM05D003701 ORTHO05D004771 2.8e-32 144.1 227 47.1
FAN17G1952 Fragaria x ananassa HOM05D003701 ORTHO05D004771 3.0e-26 124.0 305 34.4
QL07p006097 Quercus lobata HOM05D003701 ORTHO05D030296 5.7e-25 119.8 82 75.6
Oeu052763.1 Olea europaea HOM05D003701 ORTHO05D030296 7.0e-23 112.8 60 96.7
VMungo0647G0194 Vigna mungo HOM05D003701 ORTHO05D432816 2.1e-19 101.3 82 68.3
QL07p006183 Quercus lobata HOM05D003701 ORTHO05D030296 1.8e-18 98.2 63 79.4
QL09p045974 Quercus lobata HOM05D003701 ORTHO05D030296 1.8e-18 98.2 63 79.4
FAN01G1877 Fragaria x ananassa HOM05D003701 ORTHO05D208017 2.0e-17 94.7 79 62.0
Medtr0368s0020 Medicago truncatula HOM05D003701 ORTHO05D026922 5.3e-15 86.7 83 57.8
Glyma.14G185666 Glycine max HOM05D003701 ORTHO05D026922 1.2e-14 85.5 55 81.8
Oeu043945.1 Olea europaea HOM05D003701 ORTHO05D004771 1.6e-14 85.1 55 78.2
FAN12G0587 Fragaria x ananassa HOM05D003701 ORTHO05D004771 5.5e-12 76.6 99 45.5
Rhsim05G0028600 Rhododendron simsii HOM05D000745 ORTHO05D000641 2.2e-08 64.7 132 40.2
Actinidia38274 Actinidia chinensis HOM05D003701 ORTHO05D012924 2.4e-07 61.2 38 76.3
C02p38530 Brassica napus HOM05D003701 ORTHO05D101262 1.6e-06 58.5 70 47.1
CBR_g74262 Chara braunii HOM05D003701 ORTHO05D004771 4.5e-06 57.0 62 51.6
MBI09_g06128_MAGBIO Magnolia biondii HOM05D018637 ORTHO05D012924 5.9e-06 56.6 39 64.1


User provided reference genes

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