Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001028g0140 Nicotiana tabacum HOM05D007231 ORTHO05D009024 3.3e-141 505.0 250 100.0
Nitab4.5_0002386g0100 Nicotiana tabacum HOM05D002055 ORTHO05D009024 1.4e-134 483.0 248 96.8
Peaxi162Scf00570g00058 Petunia axillaris HOM05D007231 ORTHO05D009024 2.5e-128 462.2 251 91.2
CAN.G609.11 Capsicum annuum HOM05D007231 ORTHO05D009024 2.1e-127 459.1 250 89.6
Sopen09g026640 Solanum pennellii HOM05D007231 ORTHO05D009024 3.4e-125 451.8 250 87.6
Solyc09g064930.3 Solanum lycopersicum HOM05D007231 ORTHO05D009024 1.3e-124 449.9 250 86.8
Actinidia00741 Actinidia chinensis HOM05D007231 ORTHO05D009024 4.6e-106 388.3 251 75.7
Actinidia09146 Actinidia chinensis HOM05D007231 ORTHO05D009024 3.9e-105 385.2 251 75.3
Dinv32951 Davidia involucrata HOM05D007231 ORTHO05D009024 8.6e-105 384.0 253 74.7
Cc01_g19680 Coffea canephora HOM05D007231 ORTHO05D009024 2.5e-104 382.5 251 74.5
Rhsim13G0023500 Rhododendron simsii HOM05D007231 ORTHO05D009024 3.3e-104 382.1 251 74.1
Dinv11248 Davidia involucrata HOM05D007231 ORTHO05D009024 1.2e-103 380.2 250 74.4
SalBow4G2275 Salvia bowleyana HOM05D007231 ORTHO05D009024 4.4e-101 371.7 252 74.2
CiPaw.08G104200 Carya illinoinensis HOM05D007231 ORTHO05D009024 2.2e-100 369.4 251 72.1
Migut.D00275 Erythranthe guttata HOM05D007231 ORTHO05D009024 8.3e-100 367.5 251 70.5
TAR636G3122 Trochodendron aralioides HOM05D007231 ORTHO05D009024 8.3e-100 367.5 251 70.5
GSVIVG01011110001 Vitis vinifera HOM05D007231 ORTHO05D009024 2.4e-99 365.9 249 71.9
MSTRG.18222 Avicennia marina HOM05D007231 ORTHO05D009024 1.6e-98 363.2 251 72.1
TAR365G1202 Trochodendron aralioides HOM05D007231 ORTHO05D009024 1.6e-98 363.2 251 69.3
vmacro02556 Vaccinium macrocarpon HOM05D007231 ORTHO05D009024 2.1e-98 362.8 251 72.1
Cfa006118 Carpinus fangiana HOM05D007231 ORTHO05D009024 1.7e-97 359.8 256 69.5
Lj2C1175G18 Lonicera japonica HOM05D007231 ORTHO05D009024 1.7e-97 359.8 316 61.1
Gohir.D08G077400 Gossypium hirsutum HOM05D007231 ORTHO05D009024 3.3e-96 355.5 251 69.7
Gorai.004G082300 Gossypium raimondii HOM05D007231 ORTHO05D009024 7.3e-96 354.4 251 69.7
COL.COLO4_09128 Corchorus olitorius HOM05D007231 ORTHO05D009024 9.5e-96 354.0 251 69.3
Thecc.01G282400 Theobroma cacao HOM05D007231 ORTHO05D009024 1.6e-95 353.2 251 68.9
Atru.chr5.1389 Acer truncatum HOM05D007231 ORTHO05D009024 2.8e-95 352.4 251 69.3
Duzib211G0396 Durio zibethinus HOM05D007231 ORTHO05D009024 3.6e-95 352.1 251 68.1
QL12p022281 Quercus lobata HOM05D007231 ORTHO05D009024 3.6e-95 352.1 250 70.4
Gohir.A08G069100 Gossypium hirsutum HOM05D007231 ORTHO05D009024 8.1e-95 350.9 251 68.9
Manes.05G074400 Manihot esculenta HOM05D007231 ORTHO05D009024 8.9e-94 347.4 251 68.1
Ciclev10021857m.g Citrus clementina HOM05D007231 ORTHO05D009024 2.0e-93 346.3 252 68.3
Nn1g02166 Nelumbo nucifera HOM05D007231 ORTHO05D009024 2.6e-93 345.9 251 69.7
PSO210G0158 Papaver somniferum HOM05D007231 ORTHO05D009024 7.6e-93 344.4 249 67.1
Potri.019G046400 Populus trichocarpa HOM05D007231 ORTHO05D009024 9.9e-93 344.0 250 67.6
Sabra19G0055900 Salix brachista HOM05D007231 ORTHO05D009024 8.4e-92 340.9 250 66.0
MBI19_g24716_MAGBIO Magnolia biondii HOM05D007231 ORTHO05D009024 1.9e-91 339.7 247 67.2
HanXRQChr01g0002311 Helianthus annuus HOM05D007231 ORTHO05D009024 5.4e-91 338.2 240 68.3
Oeu015959.1 Olea europaea HOM05D007231 ORTHO05D009024 1.6e-90 336.7 227 72.7
THA.LOC104801225 Tarenaya hassleriana HOM05D007231 ORTHO05D009024 1.6e-90 336.7 252 68.3
CANSAT25G1925 Cannabis sativa HOM05D007231 ORTHO05D009024 2.1e-90 336.3 251 65.3
SGA_v2.0_scaffold11G05804 Striga asiatica HOM05D002055 ORTHO05D002120 4.6e-90 335.1 259 65.3
Lj5g0005680 Lotus japonicus HOM05D007231 ORTHO05D009024 1.3e-89 333.6 246 67.1
HanXRQChr11g0327631 Helianthus annuus HOM05D007231 ORTHO05D009024 2.3e-89 332.8 251 65.7
Oeu022878.1 Olea europaea HOM05D007231 ORTHO05D009024 2.3e-89 332.8 227 72.2
Glyma.10G025400 Glycine max HOM05D007231 ORTHO05D009024 3.9e-89 332.0 246 67.1
Prupe.8G243400 Prunus persica HOM05D007231 ORTHO05D009024 6.6e-89 331.3 251 66.1
MD11G1288600 Malus domestica HOM05D007231 ORTHO05D009024 8.6e-89 330.9 253 64.0
RcHm_v2.0_Chr6g0291381 Rosa chinensis HOM05D007231 ORTHO05D009024 1.9e-88 329.7 253 64.0
FvH4_2g23810 Fragaria vesca HOM05D007231 ORTHO05D009024 4.3e-88 328.6 254 66.1
arahy.Tifrunner.gnm1.ann1.9UA39Y Arachis hypogaea HOM05D007231 ORTHO05D009024 7.3e-88 327.8 252 65.5
arahy.Tifrunner.gnm1.ann1.LJDI86 Arachis hypogaea HOM05D007231 ORTHO05D009024 7.3e-88 327.8 252 65.5
ECA248G0248 Erigeron canadensis HOM05D002055 ORTHO05D002120 9.6e-88 327.4 230 69.1
Lalb_Chr06g0163091 Lupinus albus HOM05D007231 ORTHO05D009024 9.6e-88 327.4 242 67.4
Cpa.g.sc64.168 Carica papaya HOM05D007231 ORTHO05D009024 1.2e-87 327.0 251 65.7
Lsat_1_v5_gn_5_190100 Lactuca sativa HOM05D007231 ORTHO05D009024 1.2e-87 327.0 249 65.5
Phvul.007G170300 Phaseolus vulgaris HOM05D007231 ORTHO05D009024 1.2e-87 327.0 246 65.9
Lalb_Chr02g0142831 Lupinus albus HOM05D007231 ORTHO05D009024 3.6e-87 325.5 242 66.5
Sp1g02240 Schrenkiella parvula HOM05D007231 ORTHO05D009024 6.2e-87 324.7 251 63.7
Aa31LG1G9290 Aethionema arabicum HOM05D007231 ORTHO05D009024 8.1e-87 324.3 251 63.7
SGA_v2.0_scaffold1G00456 Striga asiatica HOM05D007231 ORTHO05D009024 1.4e-86 323.6 251 66.1
Ca_09766_v3 Cicer arietinum L. HOM05D002055 ORTHO05D002120 1.8e-86 323.2 243 65.8
Aqoxy2G03271 Aquilegia oxysepala HOM05D007231 ORTHO05D009024 2.4e-86 322.8 235 66.0
AT1G03250 Arabidopsis thaliana HOM05D007231 ORTHO05D009024 2.4e-86 322.8 251 62.2
Eucgr.K03384 Eucalyptus grandis HOM05D007231 ORTHO05D009024 2.4e-86 322.8 240 67.9
Psat6g125920 Pisum sativum HOM05D007231 ORTHO05D009024 5.2e-86 321.6 246 63.8
FAN27G1680 Fragaria x ananassa HOM05D007231 ORTHO05D009024 6.9e-86 321.2 261 64.4
AL1G12740 Arabidopsis lyrata HOM05D007231 ORTHO05D009024 1.5e-85 320.1 251 62.5
BcaC05g24637 Brassica carinata HOM05D007231 ORTHO05D009024 1.5e-85 320.1 251 63.3
CARHR002550 Cardamine hirsuta HOM05D007231 ORTHO05D009024 2.6e-85 319.3 251 62.5
A10p01800 Brassica napus HOM05D007231 ORTHO05D009024 4.4e-85 318.5 251 62.5
Thhalv10008549m.g Eutrema salsugineum HOM05D007231 ORTHO05D009024 2.9e-84 315.8 255 61.2
BraA10t42455Z Brassica rapa HOM05D007231 ORTHO05D009024 3.8e-84 315.5 251 62.5
AUR62036799 Chenopodium quinoa HOM05D007231 ORTHO05D009024 3.8e-84 315.5 278 57.2
EL10Ac7g17220 Beta vulgaris HOM05D007231 ORTHO05D009024 1.4e-83 313.5 302 55.0
CsaV3_7G028660 Cucumis sativus L. HOM05D007231 ORTHO05D009024 1.9e-83 313.2 251 61.4
BcaC05g24551 Brassica carinata HOM05D007231 ORTHO05D009024 2.4e-83 312.8 252 62.3
C05p01780 Brassica napus HOM05D007231 ORTHO05D009024 1.2e-82 310.5 262 60.3
BolC5t28956H Brassica oleracea HOM05D007231 ORTHO05D009024 2.1e-82 309.7 258 60.9
MELO3C015851.2 Cucumis melo HOM05D007231 ORTHO05D009024 2.1e-82 309.7 251 61.4
Carub.0001s0236 Capsella rubella HOM05D007231 ORTHO05D009024 3.5e-82 308.9 251 59.8
VMungo0720G1677 Vigna mungo HOM05D002055 ORTHO05D002120 7.8e-82 307.8 220 69.1
Medtr1g072510 Medicago truncatula HOM05D007231 ORTHO05D009024 1.0e-81 307.4 227 66.5
Hund05352 Selenicereus undatus HOM05D007231 ORTHO05D009024 3.9e-81 305.4 251 61.8
FAN20G2044 Fragaria x ananassa HOM05D007231 ORTHO05D009024 3.1e-78 295.8 303 55.4
CDE04G0796 Ceratophyllum demersum HOM05D007231 ORTHO05D009024 2.2e-76 289.7 240 60.8
Sed0024964 Sechium edule HOM05D002055 ORTHO05D002120 2.9e-76 289.3 234 61.1
CSS0040014 Camellia sinensis var. sinensis HOM05D007231 ORTHO05D009024 4.9e-76 288.5 190 74.2
TWI14G0923 Tripterygium wilfordii HOM05D002055 ORTHO05D002120 8.4e-76 287.7 217 68.2
Duzib138G1636 Durio zibethinus HOM05D007231 ORTHO05D009024 6.0e-74 281.6 250 58.8
unitig_0.g109 Utricularia gibba HOM05D007231 ORTHO05D009024 1.0e-73 280.8 213 62.0
PGR044G2216 Punica granatum HOM05D007231 ORTHO05D009024 3.3e-72 275.8 188 70.2
Os12g0144000 Oryza sativa ssp. japonica HOM05D007231 ORTHO05D009024 7.4e-72 274.6 246 56.1
Zm00001eb342980 Zea mays HOM05D007231 ORTHO05D009024 7.4e-72 274.6 246 56.1
Os11g0147100 Oryza sativa ssp. japonica HOM05D007231 ORTHO05D009024 4.8e-71 271.9 248 54.8
Ciclev10022442m.g Citrus clementina HOM05D007231 ORTHO05D009024 9.0e-70 267.7 188 68.1
ClCG09G006940 Citrullus lanatus HOM05D002055 ORTHO05D002120 1.7e-68 263.5 199 63.8
Zm00001eb196600 Zea mays HOM05D007231 ORTHO05D009024 2.9e-68 262.7 250 55.2
ATR0626G005 Amborella trichopoda HOM05D007231 ORTHO05D009024 1.9e-64 250.0 214 57.0
HPP92_016066 Vanilla planifolia HOM05D006695 ORTHO05D008239 3.4e-61 239.2 207 59.9
AUR62039907 Chenopodium quinoa HOM05D007231 ORTHO05D009024 8.2e-55 218.0 152 66.4
Sc05g0004910 Simmondsia chinensis HOM05D007231 ORTHO05D009024 1.2e-53 214.2 165 64.8
SEGI_15193 Sequoiadendron giganteum HOM05D007231 ORTHO05D009024 2.0e-37 160.2 217 41.5
TPR.G19967 Trifolium pratense HOM05D007231 ORTHO05D009024 1.4e-35 154.1 121 62.8
Mapoly0057s0044 Marchantia polymorpha HOM05D007231 ORTHO05D009024 7.0e-30 135.2 217 39.2
SMO137G0298 Selaginella moellendorffii HOM05D007231 ORTHO05D009024 1.8e-25 120.6 186 41.4
Cc01_g19320 Coffea canephora HOM05D007231 ORTHO05D009024 2.3e-25 120.2 136 49.3
SMO170G0043 Selaginella moellendorffii HOM05D007231 ORTHO05D009024 4.0e-25 119.4 186 40.9
Pp3c4_28170 Physcomitrium patens HOM05D007231 ORTHO05D009024 4.8e-23 112.5 216 34.3
AagrBONN_evm.TU.Sc2ySwM_117.667 Anthoceros agrestis HOM05D007231 ORTHO05D009024 9.1e-22 108.2 206 31.1
MCO13G326 Micromonas commoda HOM05D007231 ORTHO05D009024 2.7e-21 106.7 197 33.5
Cre01.g040100 Chlamydomonas reinhardtii HOM05D007231 ORTHO05D009024 3.2e-19 99.8 187 33.2
CDE02G1070 Ceratophyllum demersum HOM05D007231 ORTHO05D009024 3.6e-18 96.3 135 42.2
TPR.G24733 Trifolium pratense HOM05D007231 ORTHO05D009024 8.0e-18 95.1 61 75.4
BcaC05g24635 Brassica carinata HOM05D007231 ORTHO05D009024 1.2e-16 91.3 76 57.9
CDE02G2493 Ceratophyllum demersum HOM05D007231 ORTHO05D009024 5.5e-11 72.4 68 54.4
TPR.G17639 Trifolium pratense HOM05D007231 ORTHO05D009024 1.7e-07 60.8 43 60.5
TPR.G23952 Trifolium pratense HOM05D007231 ORTHO05D009024 1.7e-07 60.8 43 60.5


User provided reference genes

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