Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001027g0010 Nicotiana tabacum HOM05D006522 ORTHO05D008183 1.7e-151 539.3 268 100.0
Nitab4.5_0003396g0010 Nicotiana tabacum HOM05D006522 ORTHO05D008183 1.5e-142 509.6 268 94.4
CAN.G1550.13 Capsicum annuum HOM05D006522 ORTHO05D008183 5.4e-137 491.1 269 89.6
PGSC0003DMG400023383 Solanum tuberosum HOM05D006522 ORTHO05D008183 3.5e-136 488.4 269 88.1
Sopen05g033820 Solanum pennellii HOM05D006522 ORTHO05D008183 1.7e-135 486.1 269 87.7
CSS0003121 Camellia sinensis var. sinensis HOM05D006522 ORTHO05D008183 6.6e-103 377.9 285 68.4
Cc00_g21690 Coffea canephora HOM05D006522 ORTHO05D008183 1.5e-102 376.7 296 68.2
CiPaw.04G095200 Carya illinoinensis HOM05D006522 ORTHO05D008183 7.3e-102 374.4 266 71.1
Thecc.01G107900 Theobroma cacao HOM05D006522 ORTHO05D008183 9.5e-102 374.0 270 71.5
ECA238G0371 Erigeron canadensis HOM05D006522 ORTHO05D008183 2.8e-101 372.5 270 70.4
Duzib187G0580 Durio zibethinus HOM05D006522 ORTHO05D008183 3.6e-101 372.1 269 70.6
HanXRQChr14g0446011 Helianthus annuus HOM05D006522 ORTHO05D008183 1.4e-100 370.2 271 69.7
Potri.005G080300 Populus trichocarpa HOM05D006522 ORTHO05D008183 1.4e-100 370.2 269 69.9
MD15G1329600 Malus domestica HOM05D006522 ORTHO05D008183 4.0e-100 368.6 274 69.3
CANSAT01G1323 Cannabis sativa HOM05D006522 ORTHO05D008183 7.6e-99 364.4 273 68.1
Gohir.D03G044300 Gossypium hirsutum HOM05D006522 ORTHO05D008183 2.2e-98 362.8 271 68.6
Gohir.A02G132900 Gossypium hirsutum HOM05D006522 ORTHO05D008183 2.9e-98 362.5 271 68.6
RcHm_v2.0_Chr2g0115571 Rosa chinensis HOM05D006522 ORTHO05D008183 4.9e-98 361.7 272 68.4
Ciclev10027591m.g Citrus clementina HOM05D006522 ORTHO05D008183 6.4e-98 361.3 284 66.9
FvH4_1g21690 Fragaria vesca HOM05D006522 ORTHO05D008183 1.4e-97 360.1 273 68.1
MSTRG.23326 Avicennia marina HOM05D006522 ORTHO05D008183 4.2e-97 358.6 225 77.8
Manes.13G077900 Manihot esculenta HOM05D006522 ORTHO05D008183 7.1e-97 357.8 299 63.2
TWI53G0226 Tripterygium wilfordii HOM05D006522 ORTHO05D008183 7.1e-97 357.8 267 67.8
THA.LOC104819310 Tarenaya hassleriana HOM05D006522 ORTHO05D008183 9.2e-97 357.5 270 67.8
Hma1.2p1_0070F.1_g037610 Hydrangea macrophylla HOM05D006522 ORTHO05D008183 3.5e-96 355.5 276 65.9
Thhalv10014396m.g Eutrema salsugineum HOM05D006522 ORTHO05D008183 7.8e-96 354.4 269 66.2
Dinv16321 Davidia involucrata HOM05D006522 ORTHO05D008183 1.0e-95 354.0 268 66.0
EL10Ac1g00879 Beta vulgaris HOM05D006522 ORTHO05D008183 1.7e-95 353.2 274 67.2
QL06p050567 Quercus lobata HOM05D006522 ORTHO05D008183 2.3e-95 352.8 318 60.4
Eucgr.I00376 Eucalyptus grandis HOM05D006522 ORTHO05D008183 3.9e-95 352.1 280 66.4
Sed0017006 Sechium edule HOM05D006522 ORTHO05D008183 3.9e-95 352.1 271 66.8
Lj4g0021245 Lotus japonicus HOM05D006522 ORTHO05D008183 6.6e-95 351.3 274 65.0
Carub.0006s0853 Capsella rubella HOM05D006522 ORTHO05D008183 5.6e-94 348.2 270 64.8
Actinidia28878 Actinidia chinensis HOM05D001075 ORTHO05D008183 7.3e-94 347.8 269 66.2
VMungo0251G3519 Vigna mungo HOM05D006522 ORTHO05D008183 7.3e-94 347.8 272 65.8
GSVIVG01022189001 Vitis vinifera HOM05D006522 ORTHO05D008183 7.3e-94 347.8 303 60.1
Sp6g33330 Schrenkiella parvula HOM05D006522 ORTHO05D008183 2.1e-93 346.3 268 65.3
Ca_17709_v3 Cicer arietinum L. HOM05D006522 ORTHO05D008183 1.4e-92 343.6 274 63.1
AL6G20520 Arabidopsis lyrata HOM05D006522 ORTHO05D008183 2.4e-92 342.8 270 65.6
arahy.Tifrunner.gnm1.ann1.8IYW0J Arachis hypogaea HOM05D006522 ORTHO05D008183 4.0e-92 342.0 282 63.8
AUR62013645 Chenopodium quinoa HOM05D006522 ORTHO05D008183 5.3e-92 341.7 274 66.4
BcaC04g19347 Brassica carinata HOM05D006522 ORTHO05D008183 6.9e-92 341.3 267 66.7
BolC9t59510H Brassica oleracea HOM05D006522 ORTHO05D008183 6.9e-92 341.3 267 66.7
C09p67500 Brassica napus HOM05D006522 ORTHO05D008183 9.0e-92 340.9 267 66.7
BraA10t44795Z Brassica rapa HOM05D006522 ORTHO05D008183 9.0e-92 340.9 266 65.0
Medtr8g091510 Medicago truncatula HOM05D006522 ORTHO05D008183 9.0e-92 340.9 273 63.4
Phvul.002G262800 Phaseolus vulgaris HOM05D006522 ORTHO05D008183 9.0e-92 340.9 277 65.0
Sc23g0003650 Simmondsia chinensis HOM05D006522 ORTHO05D008183 9.0e-92 340.9 268 62.7
Lalb_Chr12g0203641 Lupinus albus HOM05D006522 ORTHO05D008183 1.5e-91 340.1 272 65.4
Os03g0195200 Oryza sativa ssp. japonica HOM05D006522 ORTHO05D008183 1.5e-91 340.1 235 68.9
Glyma.05G181800 Glycine max HOM05D006522 ORTHO05D008183 2.0e-91 339.7 275 65.1
Glyma.08G139500 Glycine max HOM05D006522 ORTHO05D008183 3.4e-91 339.0 276 65.2
SGA_v2.0_scaffold2G01317 Striga asiatica HOM05D006522 ORTHO05D008183 4.4e-91 338.6 243 71.6
Ah.05g174330 Amaranthus hybridus HOM05D006522 ORTHO05D008183 1.3e-90 337.0 270 65.2
Psat7g053400 Pisum sativum HOM05D006522 ORTHO05D008183 8.4e-90 334.3 269 61.7
Aa31LG3G17070 Aethionema arabicum HOM05D006522 ORTHO05D008183 1.1e-89 334.0 270 64.8
AUR62004203 Chenopodium quinoa HOM05D006522 ORTHO05D008183 2.4e-89 332.8 270 65.2
Rhsim10G0156200 Rhododendron simsii HOM05D006522 ORTHO05D008183 7.1e-89 331.3 352 53.4
PSO541G5899 Papaver somniferum HOM05D006522 ORTHO05D008183 9.3e-89 330.9 274 63.9
MELO3C017578.2 Cucumis melo HOM05D006522 ORTHO05D008183 1.2e-88 330.5 313 59.4
BcaB08g37142 Brassica carinata HOM05D006522 ORTHO05D008183 3.5e-88 328.9 256 66.8
PSO675G0908 Papaver somniferum HOM05D006522 ORTHO05D008183 3.5e-88 328.9 275 63.6
FAN26G1180 Fragaria x ananassa HOM05D006522 ORTHO05D008183 1.3e-87 327.0 336 55.4
Gorai.003G045400 Gossypium raimondii HOM05D006522 ORTHO05D008183 1.7e-87 326.6 271 64.9
Zm00001eb401110 Zea mays HOM05D006522 ORTHO05D008183 1.7e-87 326.6 260 63.5
Prupe.6G178600 Prunus persica HOM05D006522 ORTHO05D008183 2.3e-87 326.2 270 64.4
TAR376G0333 Trochodendron aralioides HOM05D006522 ORTHO05D008183 2.3e-87 326.2 281 63.3
Atru.chr4.281 Acer truncatum HOM05D006522 ORTHO05D008183 1.9e-86 323.2 268 63.8
Migut.H02394 Erythranthe guttata HOM05D006522 ORTHO05D008183 1.9e-86 323.2 222 72.1
HPP92_027257 Vanilla planifolia HOM05D006522 ORTHO05D008183 3.3e-86 322.4 273 60.4
PGR004G1063 Punica granatum HOM05D006522 ORTHO05D008183 1.3e-85 320.5 272 63.6
CARHR203220 Cardamine hirsuta HOM05D006522 ORTHO05D008183 8.1e-85 317.8 208 72.1
TPR.G2232 Trifolium pratense HOM05D006522 ORTHO05D008183 6.9e-84 314.7 266 60.9
Sabra05G0065900 Salix brachista HOM05D006522 ORTHO05D008183 1.1e-81 307.4 269 61.0
ATR0564G484 Amborella trichopoda HOM05D006522 ORTHO05D008183 2.7e-80 302.8 274 58.4
SalBow3G1116 Salvia bowleyana HOM05D006522 ORTHO05D008183 7.9e-80 301.2 237 65.4
Oeu028389.1 Olea europaea HOM05D006522 ORTHO05D008183 1.0e-79 300.8 179 78.8
vmacro12933 Vaccinium macrocarpon HOM05D006522 ORTHO05D008183 2.3e-79 299.7 264 59.1
Hma1.2p1_0070F.1_g037620 Hydrangea macrophylla HOM05D006522 ORTHO05D008183 6.7e-79 298.1 276 58.7
COL.COLO4_11046 Corchorus olitorius HOM05D006522 ORTHO05D008183 1.5e-78 297.0 228 67.1
Nn5g28991 Nelumbo nucifera HOM05D006522 ORTHO05D008183 4.8e-77 292.0 274 59.1
ECA238G2930 Erigeron canadensis HOM05D006522 ORTHO05D008183 3.4e-75 285.8 193 74.6
FAN19G2878 Fragaria x ananassa HOM05D006522 ORTHO05D008183 2.9e-74 282.7 321 52.0
AUR62013648 Chenopodium quinoa HOM05D006522 ORTHO05D008183 4.9e-74 282.0 240 62.9
AT5G10070 Arabidopsis thaliana HOM05D006522 ORTHO05D008183 1.9e-73 280.0 182 75.3
Mapoly0168s0016 Marchantia polymorpha HOM05D006522 ORTHO05D008183 1.9e-73 280.0 270 54.1
A10p27440 Brassica napus HOM05D006522 ORTHO05D008183 5.5e-73 278.5 236 61.9
Lsat_1_v5_gn_2_67761 Lactuca sativa HOM05D006522 ORTHO05D008183 1.6e-72 276.9 268 58.2
CsaV3_UNG186480 Cucumis sativus L. HOM05D006522 ORTHO05D008183 4.6e-72 275.4 202 68.3
unitig_736.g22572 Utricularia gibba HOM05D006522 ORTHO05D008183 6.7e-71 271.6 237 59.9
Lj2A556G28 Lonicera japonica HOM05D006522 ORTHO05D008183 1.5e-70 270.4 243 60.9
arahy.Tifrunner.gnm1.ann1.2EL0K0 Arachis hypogaea HOM05D006522 ORTHO05D008183 7.4e-70 268.1 184 71.7
Pp3c17_17150 Physcomitrium patens HOM05D006522 ORTHO05D008183 4.8e-69 265.4 226 55.8
Cfa002723 Carpinus fangiana HOM05D006522 ORTHO05D008183 6.2e-69 265.0 191 68.1
Aqoxy6G00537 Aquilegia oxysepala HOM05D006522 ORTHO05D008183 2.6e-67 259.6 185 69.7
SMO139G0021 Selaginella moellendorffii HOM05D006522 ORTHO05D008183 1.1e-65 254.2 212 58.0
CBR_g22385 Chara braunii HOM05D006522 ORTHO05D008183 2.3e-63 246.5 253 47.4
Psat7g089320 Pisum sativum HOM05D006522 ORTHO05D008183 2.4e-60 236.5 194 62.9
MCO11G860 Micromonas commoda HOM05D006522 ORTHO05D008183 3.6e-56 222.6 220 49.1
Cre17.g698950 Chlamydomonas reinhardtii HOM05D006522 ORTHO05D008183 1.0e-55 221.1 185 55.7
ClCG09G014260 Citrullus lanatus HOM05D006522 ORTHO05D008183 2.3e-55 219.9 288 47.2
Haze_26963 Corylus avellana HOM05D006522 ORTHO05D008183 5.1e-55 218.8 213 50.2
BcaB08g37140 Brassica carinata HOM05D006522 ORTHO05D008183 2.0e-54 216.9 132 75.0
PRCOL_00002914 Prasinoderma coloniale HOM05D006522 ORTHO05D008183 2.5e-49 199.9 201 49.8
MD01G1023100 Malus domestica HOM05D006522 ORTHO05D008183 4.1e-44 182.6 136 69.1
CDE10G0337 Ceratophyllum demersum HOM05D006522 ORTHO05D008183 8.0e-40 168.3 187 52.4
Cfa022135 Carpinus fangiana HOM05D006522 ORTHO05D008183 1.0e-39 167.9 214 40.7
Haze_24999 Corylus avellana HOM05D006522 ORTHO05D008183 1.3e-37 161.0 193 50.3
AUR62004200 Chenopodium quinoa HOM05D006522 ORTHO05D008183 4.1e-28 129.4 222 41.0
Eucgr.L02916 Eucalyptus grandis HOM05D006522 ORTHO05D008183 1.2e-24 117.9 109 60.6
SEGI_11019 Sequoiadendron giganteum HOM05D006522 ORTHO05D008183 1.5e-22 110.9 56 87.5
SEGI_36547 Sequoiadendron giganteum HOM05D006522 ORTHO05D008183 3.8e-18 96.3 90 54.4
SHI11626 Sapria himalayana HOM05D006522 ORTHO05D008183 3.3e-17 93.2 59 71.2
MD01G1023200 Malus domestica HOM05D006522 ORTHO05D008183 1.6e-16 90.9 63 66.7
SHI11627 Sapria himalayana HOM05D006522 ORTHO05D008183 2.8e-16 90.1 94 50.0
COL.COLO4_11047 Corchorus olitorius HOM05D006522 ORTHO05D008183 2.3e-15 87.0 100 55.0
AagrBONN_evm.TU.Sc2ySwM_368.3361 Anthoceros agrestis HOM05D006522 ORTHO05D008183 1.5e-14 84.3 88 45.5
Aqoxy6G00538 Aquilegia oxysepala HOM05D006522 ORTHO05D008183 8.3e-13 78.6 84 56.0
Potri.007G087000 Populus trichocarpa HOM05D006522 ORTHO05D008183 8.3e-13 78.6 77 54.5
CDE10G0344 Ceratophyllum demersum HOM05D006522 ORTHO05D008183 3.9e-10 69.7 78 50.0


User provided reference genes

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