Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001021g0100 Nicotiana tabacum HOM05D003638 ORTHO05D003202 2.9e-76 288.5 146 100.0
Nitab4.5_0001555g0110 Nicotiana tabacum HOM05D003638 ORTHO05D003202 7.1e-67 257.3 141 91.5
PGSC0003DMG400030735 Solanum tuberosum HOM05D003638 ORTHO05D003202 6.9e-54 214.2 142 81.7
Solyc07g007180.4 Solanum lycopersicum HOM05D003638 ORTHO05D003202 5.6e-48 194.5 142 77.5
Sopen07g003230 Solanum pennellii HOM05D003638 ORTHO05D003202 4.8e-47 191.4 142 76.8
Peaxi162Scf00391g00113 Petunia axillaris HOM05D003638 ORTHO05D003202 1.8e-33 146.4 109 78.0
Nitab4.5_0001555g0090 Nicotiana tabacum HOM05D003638 ORTHO05D003202 1.1e-16 90.5 125 46.4
PGSC0003DMG401030736 Solanum tuberosum HOM05D003638 ORTHO05D003202 5.7e-16 88.2 124 44.4
Peaxi162Scf00391g00019 Petunia axillaris HOM05D003638 ORTHO05D003202 9.7e-16 87.4 142 39.4
Actinidia04244 Actinidia chinensis HOM05D003638 ORTHO05D003202 1.3e-15 87.0 123 39.8
Solyc07g007160.3 Solanum lycopersicum HOM05D003638 ORTHO05D003202 2.8e-15 85.9 124 43.5
Nitab4.5_0001751g0040 Nicotiana tabacum HOM05D003638 ORTHO05D003202 3.7e-15 85.5 121 46.3
Sopen07g003210 Solanum pennellii HOM05D003638 ORTHO05D003202 3.7e-15 85.5 124 43.5
Peaxi162Scf00108g00110 Petunia axillaris HOM05D003638 ORTHO05D003202 8.2e-15 84.3 123 44.7
Actinidia21912 Actinidia chinensis HOM05D003638 ORTHO05D003202 2.4e-14 82.8 127 39.4
Potri.018G114500 Populus trichocarpa HOM05D003638 ORTHO05D003202 2.4e-14 82.8 174 34.5
Thecc.09G141300 Theobroma cacao HOM05D003638 ORTHO05D003202 9.1e-14 80.9 123 42.3
Ah.14g078720 Amaranthus hybridus HOM05D003638 ORTHO05D003202 2.0e-13 79.7 111 45.0
Nitab4.5_0001021g0080 Nicotiana tabacum HOM05D003638 ORTHO05D003202 4.5e-13 78.6 115 42.6
CiPaw.16G118000 Carya illinoinensis HOM05D003638 ORTHO05D003202 5.9e-13 78.2 177 30.5
Manes.06G041300 Manihot esculenta HOM05D003638 ORTHO05D003202 7.7e-13 77.8 169 32.0
CiPaw.15G182800 Carya illinoinensis HOM05D003638 ORTHO05D003202 1.0e-12 77.4 140 36.4
Duzib187G0526 Durio zibethinus HOM05D003638 ORTHO05D003202 1.0e-12 77.4 123 43.9
Duzib168G1473 Durio zibethinus HOM05D003638 ORTHO05D003202 1.3e-12 77.0 169 35.5
Ciclev10009499m.g Citrus clementina HOM05D003638 ORTHO05D003202 1.7e-12 76.6 123 40.7
RcHm_v2.0_Chr2g0086711 Rosa chinensis HOM05D003638 ORTHO05D003202 1.7e-12 76.6 145 35.2
FAN26G1151 Fragaria x ananassa HOM05D003638 ORTHO05D003202 2.2e-12 76.3 148 32.4
Cc06_g07440 Coffea canephora HOM05D003638 ORTHO05D003202 2.9e-12 75.9 124 41.9
MELO3C004441.2 Cucumis melo HOM05D003638 ORTHO05D003202 3.8e-12 75.5 177 33.9
arahy.Tifrunner.gnm1.ann1.ZD4V4J Arachis hypogaea HOM05D003638 ORTHO05D003202 5.0e-12 75.1 118 40.7
FAN23G0723 Fragaria x ananassa HOM05D003638 ORTHO05D003202 5.0e-12 75.1 148 31.8
Gohir.A08G095362 Gossypium hirsutum HOM05D003638 ORTHO05D003202 1.5e-11 73.6 135 37.8
ClCG02G017240 Citrullus lanatus HOM05D003638 ORTHO05D003202 1.9e-11 73.2 175 33.1
TWI63G0270 Tripterygium wilfordii HOM05D003638 ORTHO05D003202 1.9e-11 73.2 121 39.7
Phvul.009G209800 Phaseolus vulgaris HOM05D003638 ORTHO05D003202 2.5e-11 72.8 165 35.2
BraA07t28311Z Brassica rapa HOM05D003638 ORTHO05D003202 3.2e-11 72.4 125 41.6
FvH4_1g01750 Fragaria vesca HOM05D003638 ORTHO05D003202 3.2e-11 72.4 147 32.0
Glyma.09G096300 Glycine max HOM05D003638 ORTHO05D003202 3.2e-11 72.4 166 33.7
Nitab4.5_0005330g0090 Nicotiana tabacum HOM05D003638 ORTHO05D003202 3.2e-11 72.4 160 37.5
BcaB03g16305 Brassica carinata HOM05D003638 ORTHO05D003202 4.2e-11 72.0 126 43.7
C07p08290 Brassica napus HOM05D003638 ORTHO05D003202 4.2e-11 72.0 125 41.6
BolC7t41242H Brassica oleracea HOM05D003638 ORTHO05D003202 4.2e-11 72.0 125 41.6
Eucgr.C04088 Eucalyptus grandis HOM05D003638 ORTHO05D003202 4.2e-11 72.0 132 37.9
FAN28G0590 Fragaria x ananassa HOM05D003638 ORTHO05D003202 4.2e-11 72.0 147 32.0
BcaC06g36068 Brassica carinata HOM05D003638 ORTHO05D003202 5.5e-11 71.6 103 43.7
Sed0014564 Sechium edule HOM05D003638 ORTHO05D003202 5.5e-11 71.6 124 41.1
Glyma.15G201800 Glycine max HOM05D003638 ORTHO05D003202 7.2e-11 71.2 165 33.3
arahy.Tifrunner.gnm1.ann1.8W4I3Q Arachis hypogaea HOM05D003638 ORTHO05D003202 9.4e-11 70.9 116 37.1
FAN19G2555 Fragaria x ananassa HOM05D003638 ORTHO05D003202 9.4e-11 70.9 148 31.1
Gohir.D08G106900 Gossypium hirsutum HOM05D003638 ORTHO05D003202 1.2e-10 70.5 114 39.5
Gorai.004G114100 Gossypium raimondii HOM05D003638 ORTHO05D003202 1.2e-10 70.5 114 39.5
EL10Ac8g18824 Beta vulgaris HOM05D003638 ORTHO05D003202 1.6e-10 70.1 168 32.7
CSS0017335 Camellia sinensis var. sinensis HOM05D003638 ORTHO05D003202 1.6e-10 70.1 142 37.3
Potri.006G190300 Populus trichocarpa HOM05D003638 ORTHO05D003202 1.6e-10 70.1 186 31.7
Medtr2g461020 Medicago truncatula HOM05D003638 ORTHO05D003202 2.1e-10 69.7 118 39.0
Sabra18G0097400 Salix brachista HOM05D003638 ORTHO05D003202 2.1e-10 69.7 172 32.0
vmacro21884 Vaccinium macrocarpon HOM05D003638 ORTHO05D003202 2.1e-10 69.7 127 36.2
CsaV3_2G003550 Cucumis sativus L. HOM05D003638 ORTHO05D003202 2.7e-10 69.3 127 34.6
Dinv42915 Davidia involucrata HOM05D003638 ORTHO05D003202 2.7e-10 69.3 120 39.2
Dinv43185 Davidia involucrata HOM05D003638 ORTHO05D003202 2.7e-10 69.3 120 39.2
Lsat_1_v5_gn_5_94401 Lactuca sativa HOM05D003638 ORTHO05D003202 2.7e-10 69.3 156 34.6
MD15G1160000 Malus domestica HOM05D003638 ORTHO05D003202 2.7e-10 69.3 133 39.1
BcaB03g16307 Brassica carinata HOM05D003638 ORTHO05D003202 3.6e-10 68.9 127 42.5
Cpa.g.sc46.85 Carica papaya HOM05D003638 ORTHO05D003202 3.6e-10 68.9 128 35.9
ECA234G1438 Erigeron canadensis HOM05D003638 ORTHO05D003202 3.6e-10 68.9 147 36.7
Hma1.2p1_0182F.1_g080450 Hydrangea macrophylla HOM05D003638 ORTHO05D003202 3.6e-10 68.9 171 34.5
Peaxi162Scf00108g00012 Petunia axillaris HOM05D000082 ORTHO05D003202 3.6e-10 68.9 57 61.4
Dinv22136 Davidia involucrata HOM05D003638 ORTHO05D003202 4.7e-10 68.6 121 38.8
QL02p091197 Quercus lobata HOM05D003638 ORTHO05D003202 4.7e-10 68.6 105 40.0
TPR.G25664 Trifolium pratense HOM05D003638 ORTHO05D003202 4.7e-10 68.6 126 37.3
Dinv41427 Davidia involucrata HOM05D003638 ORTHO05D003202 6.1e-10 68.2 132 39.4
Sp3g28870 Schrenkiella parvula HOM05D003638 ORTHO05D003202 6.1e-10 68.2 125 39.2
Cfa020896 Carpinus fangiana HOM05D003638 ORTHO05D003202 8.0e-10 67.8 119 36.1
Lalb_Chr11g0072961 Lupinus albus HOM05D003638 ORTHO05D003202 8.0e-10 67.8 126 34.9
Lsat_1_v5_gn_8_63100 Lactuca sativa HOM05D003638 ORTHO05D003202 1.0e-09 67.4 128 36.7
Lalb_Chr23g0275841 Lupinus albus HOM05D003638 ORTHO05D003202 1.4e-09 67.0 130 33.1
HanXRQChr05g0137971 Helianthus annuus HOM05D003638 ORTHO05D003202 1.8e-09 66.6 110 38.2
Haze_19323 Corylus avellana HOM05D003638 ORTHO05D003202 2.3e-09 66.2 155 32.9
CANSAT11G2120 Cannabis sativa HOM05D003638 ORTHO05D003202 3.0e-09 65.9 129 36.4
Eucgr.C00438 Eucalyptus grandis HOM05D003638 ORTHO05D003202 3.0e-09 65.9 106 41.5
Oeu051707.1 Olea europaea HOM05D003638 ORTHO05D003202 3.0e-09 65.9 117 41.9
TAR383G0618 Trochodendron aralioides HOM05D003638 ORTHO05D003202 3.0e-09 65.9 124 35.5
A07p05140 Brassica napus HOM05D003638 ORTHO05D003202 4.0e-09 65.5 125 40.8
MD02G1013200 Malus domestica HOM05D003638 ORTHO05D003202 4.0e-09 65.5 133 36.1
Thhalv10022864m.g Eutrema salsugineum HOM05D003638 ORTHO05D003202 5.2e-09 65.1 130 36.2
CARHR105850 Cardamine hirsuta HOM05D003638 ORTHO05D003202 6.7e-09 64.7 124 37.9
THA.LOC104808922 Tarenaya hassleriana HOM05D003638 ORTHO05D003202 8.8e-09 64.3 126 34.1
TAR626G0601 Trochodendron aralioides HOM05D003638 ORTHO05D003202 8.8e-09 64.3 127 37.8
vmacro21883 Vaccinium macrocarpon HOM05D003638 ORTHO05D003202 8.8e-09 64.3 108 34.3
Hund09319 Selenicereus undatus HOM05D003638 ORTHO05D003202 1.2e-08 63.9 122 35.2
CSS0018942 Camellia sinensis var. sinensis HOM05D003638 ORTHO05D003202 1.5e-08 63.5 129 35.7
Sc08g0005730 Simmondsia chinensis HOM05D003638 ORTHO05D003202 1.5e-08 63.5 131 39.7
MBI15_g25866_MAGBIO Magnolia biondii HOM05D003638 ORTHO05D003202 2.0e-08 63.2 114 34.2
CSS0003684 Camellia sinensis var. sinensis HOM05D003638 ORTHO05D003202 3.3e-08 62.4 129 34.9
Rhsim01G0052400 Rhododendron simsii HOM05D003638 ORTHO05D003202 3.3e-08 62.4 127 33.1
Gorai.013G237500 Gossypium raimondii HOM05D003638 ORTHO05D003202 4.4e-08 62.0 163 30.7
HanXRQChr10g0315321 Helianthus annuus HOM05D003638 ORTHO05D003202 5.7e-08 61.6 112 39.3
Nn8g39712 Nelumbo nucifera HOM05D003638 ORTHO05D003202 7.5e-08 61.2 128 35.2
Carub.0003s2935 Capsella rubella HOM05D003638 ORTHO05D003202 9.7e-08 60.8 140 34.3
AL3G47340 Arabidopsis lyrata HOM05D003638 ORTHO05D003202 1.3e-07 60.5 125 37.6
PGR102G3190 Punica granatum HOM05D003638 ORTHO05D003202 1.3e-07 60.5 112 37.5
SGA_v2.0_scaffold278G46736 Striga asiatica HOM05D003638 ORTHO05D003202 1.3e-07 60.5 124 37.1
Lj6g0008260 Lotus japonicus HOM05D003638 ORTHO05D003202 1.7e-07 60.1 122 34.4
Manes.14G138400 Manihot esculenta HOM05D003638 ORTHO05D003202 1.7e-07 60.1 127 33.9
Aqoxy7G03537 Aquilegia oxysepala HOM05D003638 ORTHO05D003202 2.8e-07 59.3 114 34.2
Gohir.A13G203100 Gossypium hirsutum HOM05D003638 ORTHO05D003202 3.7e-07 58.9 164 31.7
Duzib150G0024 Durio zibethinus HOM05D003638 ORTHO05D003202 8.2e-07 57.8 130 31.5
Gohir.D13G208400 Gossypium hirsutum HOM05D003638 ORTHO05D003202 1.1e-06 57.4 164 32.9
Lalb_Chr08g0233671 Lupinus albus HOM05D003638 ORTHO05D003202 1.1e-06 57.4 124 32.3
AT2G15580 Arabidopsis thaliana HOM05D003638 ORTHO05D003202 2.4e-06 56.2 126 35.7


User provided reference genes

Program Settings