Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001021g0090 Nicotiana tabacum HOM05D006568 ORTHO05D008342 1.8e-301 1038.5 538 100.0
Nitab4.5_0001555g0100 Nicotiana tabacum HOM05D006568 ORTHO05D008342 1.6e-286 988.8 539 95.9
Peaxi162Scf00391g00111 Petunia axillaris HOM05D006568 ORTHO05D008342 4.2e-250 867.8 550 83.5
PGSC0003DMG400030734 Solanum tuberosum HOM05D006568 ORTHO05D008342 7.7e-236 820.5 550 81.1
CAN.G518.23 Capsicum annuum HOM05D006568 ORTHO05D008342 2.5e-234 815.5 553 81.2
Solyc07g007190.3 Solanum lycopersicum HOM05D006568 ORTHO05D008342 2.0e-231 805.8 549 80.3
Sopen07g003240 Solanum pennellii HOM05D006568 ORTHO05D008342 4.9e-222 774.6 550 77.8
Cc06_g07460 Coffea canephora HOM05D006568 ORTHO05D008342 1.0e-203 713.8 549 69.2
Oeu028734.1 Olea europaea HOM05D006568 ORTHO05D008342 1.3e-195 686.8 541 68.0
CSS0018949 Camellia sinensis var. sinensis HOM05D006568 ORTHO05D008342 2.5e-186 656.0 549 65.4
Rhsim03G0254700 Rhododendron simsii HOM05D006568 ORTHO05D008342 3.2e-181 639.0 515 66.8
CANSAT11G1359 Cannabis sativa HOM05D006568 ORTHO05D008342 2.0e-175 619.8 518 65.6
DCAR_008870 Daucus carota HOM05D006568 ORTHO05D008342 1.0e-174 617.5 536 63.4
Atru.chr7.233 Acer truncatum HOM05D006568 ORTHO05D008342 1.7e-174 616.7 552 63.4
vmacro06105 Vaccinium macrocarpon HOM05D006568 ORTHO05D000801 2.1e-172 609.8 546 62.1
Haze_19324 Corylus avellana HOM05D006568 ORTHO05D008342 7.9e-172 607.8 544 62.7
GSVIVG01012889001 Vitis vinifera HOM05D006568 ORTHO05D008342 2.3e-171 606.3 540 62.6
Duzib150G1168 Durio zibethinus HOM05D006568 ORTHO05D008342 6.7e-171 604.7 512 66.4
TWI63G0031 Tripterygium wilfordii HOM05D006568 ORTHO05D008342 1.9e-170 603.2 508 66.3
Potri.018G114600 Populus trichocarpa HOM05D006568 ORTHO05D008342 1.3e-169 600.5 518 64.7
Thecc.09G141200 Theobroma cacao HOM05D006568 ORTHO05D008342 1.8e-168 596.7 512 65.2
Eucgr.C00440 Eucalyptus grandis HOM05D006568 ORTHO05D008342 9.0e-168 594.3 536 59.9
Cfa020897 Carpinus fangiana HOM05D006568 ORTHO05D008342 2.6e-167 592.8 520 63.8
Hma1.2p1_0182F.1_g080440 Hydrangea macrophylla HOM05D006568 ORTHO05D008342 2.2e-166 589.7 625 55.8
COL.COLO4_24111 Corchorus olitorius HOM05D006568 ORTHO05D008342 6.5e-166 588.2 504 65.3
Ciclev10007895m.g Citrus clementina HOM05D006568 ORTHO05D008342 4.2e-165 585.5 546 61.5
Sabra18G0097500 Salix brachista HOM05D006568 ORTHO05D008342 5.5e-165 585.1 535 61.3
QL02p091184 Quercus lobata HOM05D006568 ORTHO05D008342 7.1e-165 584.7 557 60.7
Prupe.7G255100 Prunus persica HOM05D006568 ORTHO05D008342 8.7e-163 577.8 519 63.8
Duzib168G0355 Durio zibethinus HOM05D006568 ORTHO05D008342 2.5e-162 576.2 514 63.4
Manes.14G138200 Manihot esculenta HOM05D006568 ORTHO05D008342 2.5e-162 576.2 508 64.0
Glyma.13G165600 Glycine max HOM05D006568 ORTHO05D008342 2.4e-160 569.7 525 62.1
RcHm_v2.0_Chr2g0086721 Rosa chinensis HOM05D006568 ORTHO05D008342 3.1e-160 569.3 544 59.7
CiPaw.15G182900 Carya illinoinensis HOM05D006568 ORTHO05D008342 1.2e-159 567.4 517 61.7
FAN26G2488 Fragaria x ananassa HOM05D006568 ORTHO05D008342 2.0e-159 566.6 545 59.6
Gohir.A06G050300 Gossypium hirsutum HOM05D006568 ORTHO05D008342 4.5e-159 565.5 500 63.6
Gohir.D06G049600 Gossypium hirsutum HOM05D006568 ORTHO05D008342 5.9e-159 565.1 500 63.8
Gorai.010G056500 Gossypium raimondii HOM05D006568 ORTHO05D008342 1.3e-158 563.9 500 63.6
Glyma.17G105400 Glycine max HOM05D006568 ORTHO05D008342 2.9e-158 562.8 523 61.6
Lj3C820G3 Lonicera japonica HOM05D006568 ORTHO05D008342 2.9e-158 562.8 536 59.0
FvH4_1g01760 Fragaria vesca HOM05D006568 ORTHO05D008342 5.5e-157 558.5 545 59.1
MD02G1013300 Malus domestica HOM05D006568 ORTHO05D008342 3.6e-156 555.8 519 61.5
FAN19G0856 Fragaria x ananassa HOM05D006568 ORTHO05D008342 4.6e-156 555.4 545 58.9
Lj3A817T81 Lonicera japonica HOM05D006568 ORTHO05D008342 7.9e-156 554.7 530 59.4
FAN28G1334 Fragaria x ananassa HOM05D006568 ORTHO05D008342 2.5e-154 549.7 545 58.5
Phvul.003G174400 Phaseolus vulgaris HOM05D006568 ORTHO05D008342 1.3e-153 547.4 509 61.3
Cpa.g.sc46.84 Carica papaya HOM05D006568 ORTHO05D008342 4.8e-153 545.4 510 60.4
MD15G1160100 Malus domestica HOM05D006568 ORTHO05D008342 6.3e-153 545.0 520 60.6
Potri.006G190400 Populus trichocarpa HOM05D006568 ORTHO05D008342 1.4e-152 543.9 515 61.4
Oeu040792.1 Olea europaea HOM05D006568 ORTHO05D008342 4.1e-152 542.3 418 69.6
MSTRG.26320 Avicennia marina HOM05D006568 ORTHO05D008342 6.9e-152 541.6 505 60.0
Aqoxy7G03538 Aquilegia oxysepala HOM05D006568 ORTHO05D008342 2.0e-151 540.0 503 59.6
VMungo1215G2753 Vigna mungo HOM05D006568 ORTHO05D008342 2.2e-150 536.6 510 60.0
MSTRG.6088 Avicennia marina HOM05D006568 ORTHO05D008342 3.8e-150 535.8 465 62.4
Dinv42917 Davidia involucrata HOM05D006568 ORTHO05D008342 1.1e-149 534.3 569 55.4
Dinv43183 Davidia involucrata HOM05D006568 ORTHO05D008342 1.1e-149 534.3 569 55.4
Migut.K00383 Erythranthe guttata HOM05D006568 ORTHO05D008342 5.5e-149 531.9 533 57.8
Lj4g0026005 Lotus japonicus HOM05D006568 ORTHO05D008342 5.5e-149 531.9 521 58.7
Hund21609 Selenicereus undatus HOM05D006568 ORTHO05D008342 4.7e-148 528.9 519 60.1
TPR.G15810 Trifolium pratense HOM05D006568 ORTHO05D008342 2.3e-147 526.6 512 60.0
Medtr4g116470 Medicago truncatula HOM05D006568 ORTHO05D008342 6.7e-147 525.0 526 57.8
Ca_21616_v3 Cicer arietinum L. HOM05D006568 ORTHO05D008342 2.2e-145 520.0 511 60.3
ClCG06G011990 Citrullus lanatus HOM05D006568 ORTHO05D008342 8.2e-145 518.1 547 54.5
CsaV3_1G028460 Cucumis sativus L. HOM05D006568 ORTHO05D008342 1.1e-144 517.7 503 57.5
MELO3C010267.2 Cucumis melo HOM05D006568 ORTHO05D008342 2.2e-142 510.0 506 57.1
PGR142G1115 Punica granatum HOM05D006568 ORTHO05D008342 8.5e-142 508.1 507 57.8
HanXRQChr03g0063991 Helianthus annuus HOM05D006568 ORTHO05D008342 7.4e-138 495.0 540 54.6
SalBow1G3333 Salvia bowleyana HOM05D006568 ORTHO05D008342 8.2e-137 491.5 493 57.6
Lalb_Chr12g0198501 Lupinus albus HOM05D006568 ORTHO05D008342 4.1e-136 489.2 506 57.1
Nn2g12241 Nelumbo nucifera HOM05D006568 ORTHO05D008342 1.6e-135 487.3 510 54.5
Ah.14g078680 Amaranthus hybridus HOM05D006568 ORTHO05D008342 7.7e-135 485.0 506 55.1
FAN23G2119 Fragaria x ananassa HOM05D006568 ORTHO05D008342 3.2e-133 479.6 544 54.0
AUR62041444 Chenopodium quinoa HOM05D006568 ORTHO05D008342 3.0e-131 473.0 498 53.8
ECA240G0509 Erigeron canadensis HOM05D006568 ORTHO05D008342 8.8e-131 471.5 554 52.5
Sed0017332 Sechium edule HOM05D006568 ORTHO05D008342 2.0e-130 470.3 506 54.3
AUR62011262 Chenopodium quinoa HOM05D006568 ORTHO05D008342 1.4e-128 464.2 490 54.5
arahy.Tifrunner.gnm1.ann1.XD5HYR Arachis hypogaea HOM05D006568 ORTHO05D008342 1.3e-126 457.6 497 55.1
Dinv41428 Davidia involucrata HOM05D006568 ORTHO05D008342 1.9e-125 453.8 349 69.9
arahy.Tifrunner.gnm1.ann1.9W3K41 Arachis hypogaea HOM05D006568 ORTHO05D008342 3.6e-124 449.5 512 53.7
EL10Ac8g18826 Beta vulgaris HOM05D006568 ORTHO05D008342 3.4e-122 443.0 516 51.2
MBI15_g47023_MAGBIO Magnolia biondii HOM05D006568 ORTHO05D008342 5.7e-122 442.2 548 51.1
Nn8g39711 Nelumbo nucifera HOM05D006568 ORTHO05D008342 7.5e-122 441.8 443 56.0
ATR0629G030 Amborella trichopoda HOM05D006568 ORTHO05D008342 1.7e-121 440.7 474 53.8
SalBow1G7296 Salvia bowleyana HOM05D006568 ORTHO05D008342 3.7e-121 439.5 546 50.2
Dinv22137 Davidia involucrata HOM05D006568 ORTHO05D008342 4.9e-121 439.1 462 55.8
Migut.J01268 Erythranthe guttata HOM05D006568 ORTHO05D008342 2.9e-118 429.9 547 49.2
Sed0011467 Sechium edule HOM05D006568 ORTHO05D008342 7.2e-117 425.2 495 51.5
Lalb_Chr11g0072971 Lupinus albus HOM05D006568 ORTHO05D008342 6.2e-108 395.6 509 48.5
Psat4g033400 Pisum sativum HOM05D006568 ORTHO05D008342 2.3e-107 393.7 416 56.2
SHI03244 Sapria himalayana HOM05D006568 ORTHO05D008342 1.5e-101 374.4 517 44.9
Lsat_1_v5_gn_7_47940 Lactuca sativa HOM05D006568 ORTHO05D008342 5.6e-101 372.5 513 50.9
Actinidia26349 Actinidia chinensis HOM05D006568 ORTHO05D008342 8.1e-100 368.6 331 62.5
Glyma.15G201700 Glycine max HOM05D006568 ORTHO05D008342 4.4e-98 362.8 522 46.4
Lj6g0005589 Lotus japonicus HOM05D006568 ORTHO05D008342 1.2e-92 344.7 516 44.6
Phvul.009G209900 Phaseolus vulgaris HOM05D006568 ORTHO05D008342 5.8e-90 335.9 511 43.2
VMungo1309G2996 Vigna mungo HOM05D006568 ORTHO05D008342 4.6e-87 326.2 511 42.9
HPP92_005342 Vanilla planifolia HOM05D006568 ORTHO05D008342 3.0e-86 323.6 511 39.9
TAR636G2103 Trochodendron aralioides HOM05D006568 ORTHO05D008342 8.6e-86 322.0 308 58.4
SGA_v2.0_scaffold229G43344 Striga asiatica HOM05D006568 ORTHO05D008342 5.6e-85 319.3 546 39.9
SEGI_41462 Sequoiadendron giganteum HOM05D006568 ORTHO05D008342 6.4e-81 305.8 526 41.4
SEGI_32321 Sequoiadendron giganteum HOM05D006568 ORTHO05D008342 1.1e-77 295.0 537 39.3
MBI15_g45924_MAGBIO Magnolia biondii HOM05D006568 ORTHO05D008342 1.4e-75 288.1 300 58.7
Os09g0556800 Oryza sativa ssp. japonica HOM05D006568 ORTHO05D008342 9.9e-74 282.0 559 38.1
Zm00001eb320530 Zea mays HOM05D006568 ORTHO05D008342 1.6e-71 274.6 546 36.4
Actinidia38697 Actinidia chinensis HOM05D006568 ORTHO05D008342 1.7e-70 271.2 238 64.7
Actinidia38696 Actinidia chinensis HOM05D006568 ORTHO05D008342 1.5e-66 258.1 204 65.7
PSO782G3486 Papaver somniferum HOM05D006568 ORTHO05D008342 1.5e-61 241.5 364 45.9
AagrBONN_evm.TU.Sc2ySwM_228.5766 Anthoceros agrestis HOM05D006568 ORTHO05D008342 8.7e-54 215.7 505 32.9
Mapoly0083s0072 Marchantia polymorpha HOM05D006568 ORTHO05D008342 9.3e-48 195.7 578 29.9
Zm00001eb104550 Zea mays HOM05D006568 ORTHO05D008342 4.6e-39 166.8 380 35.8
unitig_27.g25107 Utricularia gibba HOM05D006568 ORTHO05D008342 2.3e-38 164.5 141 63.8
SMO172G0216 Selaginella moellendorffii HOM05D006568 ORTHO05D008342 3.9e-38 163.7 498 28.1
Peaxi162Scf00370g00114 Petunia axillaris HOM05D006568 ORTHO05D008342 2.4e-27 127.9 158 51.9
TAR636G1038 Trochodendron aralioides HOM05D006568 ORTHO05D008342 5.9e-26 123.2 100 63.0
Dinv22138 Davidia involucrata HOM05D006568 ORTHO05D008342 2.2e-17 94.7 105 53.3
Oeu041156.1 Olea europaea HOM05D006568 ORTHO05D008342 1.9e-08 65.1 62 56.5
SMO172G0023 Selaginella moellendorffii HOM05D006568 ORTHO05D008342 1.2e-07 62.4 313 24.9
Oeu060513.1 Olea europaea HOM05D006568 ORTHO05D008342 1.4e-06 58.9 56 51.8


User provided reference genes

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