Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001018g0140 Nicotiana tabacum HOM05D000671 ORTHO05D282911 3.4e-36 154.5 76 100.0
Nitab4.5_0001803g0060 Nicotiana tabacum HOM05D000671 ORTHO05D004414 8.1e-14 80.1 56 75.0
Actinidia06598 Actinidia chinensis HOM05D000671 ORTHO05D004414 6.8e-13 77.0 54 64.8
SGA_v2.0_scaffold25G11122 Striga asiatica HOM05D000671 ORTHO05D004414 2.6e-12 75.1 54 59.3
CiPaw.06G030400 Carya illinoinensis HOM05D000671 ORTHO05D004414 4.4e-12 74.3 54 57.4
Oeu026149.1 Olea europaea HOM05D000671 ORTHO05D004414 5.8e-12 73.9 54 59.3
Oeu040423.1 Olea europaea HOM05D000671 ORTHO05D004414 1.3e-11 72.8 53 60.4
BcaC07g39125 Brassica carinata HOM05D000671 ORTHO05D004414 1.7e-11 72.4 55 63.6
A08p28780 Brassica napus HOM05D000671 ORTHO05D004414 1.7e-11 72.4 55 63.6
C08p21140 Brassica napus HOM05D000671 ORTHO05D004414 1.7e-11 72.4 55 63.6
BolC8t49754H Brassica oleracea HOM05D000671 ORTHO05D004414 1.7e-11 72.4 55 63.6
BraA08t34807Z Brassica rapa HOM05D000671 ORTHO05D004414 1.7e-11 72.4 55 63.6
Medtr3g072380 Medicago truncatula HOM05D000671 ORTHO05D004414 1.7e-11 72.4 53 56.6
Oeu050915.3 Olea europaea HOM05D000671 ORTHO05D004414 1.7e-11 72.4 54 59.3
BcaB03g11882 Brassica carinata HOM05D000671 ORTHO05D004414 3.8e-11 71.2 53 64.2
Lj4A623G14 Lonicera japonica HOM05D000671 ORTHO05D004414 3.8e-11 71.2 53 60.4
Manes.18G076500 Manihot esculenta HOM05D000671 ORTHO05D004414 4.9e-11 70.9 53 54.7
SGA_v2.0_scaffold28G12001 Striga asiatica HOM05D000671 ORTHO05D004414 4.9e-11 70.9 54 61.1
SalBow7G4705 Salvia bowleyana HOM05D000671 ORTHO05D004414 1.1e-10 69.7 54 59.3
Solyc11g012880.2 Solanum lycopersicum HOM05D000671 ORTHO05D004414 1.9e-10 68.9 54 63.0
Nn5g28256 Nelumbo nucifera HOM05D000671 ORTHO05D004414 3.2e-10 68.2 54 53.7
Sopen11g007620 Solanum pennellii HOM05D000671 ORTHO05D004414 3.2e-10 68.2 53 60.4
RcHm_v2.0_Chr6g0295661 Rosa chinensis HOM05D000671 ORTHO05D004414 4.1e-10 67.8 58 58.6
unitig_46.g18127 Utricularia gibba HOM05D000671 ORTHO05D004414 5.4e-10 67.4 53 56.6
MSTRG.25386 Avicennia marina HOM05D000671 ORTHO05D004414 9.2e-10 66.6 54 57.4
FvH4_2g26800 Fragaria vesca HOM05D000671 ORTHO05D004414 1.2e-09 66.2 58 56.9
FAN15G0640 Fragaria x ananassa HOM05D000671 ORTHO05D004414 1.2e-09 66.2 58 56.9
FAN15G2179 Fragaria x ananassa HOM05D000671 ORTHO05D004414 1.2e-09 66.2 58 56.9
FAN20G0237 Fragaria x ananassa HOM05D000671 ORTHO05D004414 1.2e-09 66.2 58 56.9
FAN24G1882 Fragaria x ananassa HOM05D000671 ORTHO05D004414 1.2e-09 66.2 58 56.9
FAN27G3513 Fragaria x ananassa HOM05D000671 ORTHO05D004414 1.2e-09 66.2 58 56.9
DCAR_011618 Daucus carota HOM05D000671 ORTHO05D004414 3.5e-09 64.7 53 54.7
HPP92_025162 Vanilla planifolia HOM05D000671 ORTHO05D004414 4.6e-09 64.3 54 61.1
Oeu017293.2 Olea europaea HOM05D000671 ORTHO05D004414 7.8e-09 63.5 54 55.6
AT1G21870 Arabidopsis thaliana HOM05D000671 ORTHO05D004414 1.3e-08 62.8 54 53.7
Dinv07457 Davidia involucrata HOM05D000671 ORTHO05D004414 1.7e-08 62.4 53 54.7
Thhalv10009473m.g Eutrema salsugineum HOM05D000671 ORTHO05D004414 1.7e-08 62.4 54 53.7
Sp1g19410 Schrenkiella parvula HOM05D000671 ORTHO05D004414 1.7e-08 62.4 54 53.7
THA.LOC104800188 Tarenaya hassleriana HOM05D000671 ORTHO05D004414 1.7e-08 62.4 55 54.5
Lsat_1_v5_gn_6_109681 Lactuca sativa HOM05D000671 ORTHO05D004414 2.3e-08 62.0 54 55.6
EL10Ac1g01054 Beta vulgaris HOM05D000671 ORTHO05D004414 3.0e-08 61.6 54 53.7
Cpa.g.sc36.58 Carica papaya HOM05D000671 ORTHO05D004414 3.0e-08 61.6 54 50.0
MSTRG.1449 Avicennia marina HOM05D000671 ORTHO05D004414 3.9e-08 61.2 54 51.9
Os08g0104900 Oryza sativa ssp. japonica HOM05D000671 ORTHO05D004414 3.9e-08 61.2 51 52.9
Prupe.1G499700 Prunus persica HOM05D000671 ORTHO05D004414 3.9e-08 61.2 56 51.8
TAR628G0319 Trochodendron aralioides HOM05D000671 ORTHO05D004414 6.6e-08 60.5 54 50.0
AL1G35070 Arabidopsis lyrata HOM05D000671 ORTHO05D004414 8.7e-08 60.1 54 51.9
Lj1g0021001 Lotus japonicus HOM05D000671 ORTHO05D004414 8.7e-08 60.1 59 47.5
MD08G1164800 Malus domestica HOM05D000671 ORTHO05D004414 8.7e-08 60.1 56 50.0
MD15G1350800 Malus domestica HOM05D000671 ORTHO05D004414 8.7e-08 60.1 56 50.0
Carub.0001s2134 Capsella rubella HOM05D000671 ORTHO05D004414 1.1e-07 59.7 59 50.8
Peaxi162Scf00051g00087 Petunia axillaris HOM05D000671 ORTHO05D004414 1.1e-07 59.7 54 53.7
Solyc06g060370.3 Solanum lycopersicum HOM05D000671 ORTHO05D004414 1.1e-07 59.7 54 53.7
PGSC0003DMG400017572 Solanum tuberosum HOM05D000671 ORTHO05D004414 1.1e-07 59.7 54 53.7
THA.LOC104813654 Tarenaya hassleriana HOM05D000671 ORTHO05D004414 1.1e-07 59.7 60 50.0
THA.LOC104817297 Tarenaya hassleriana HOM05D000671 ORTHO05D004414 1.1e-07 59.7 53 50.9
arahy.Tifrunner.gnm1.ann1.BDH7ZM Arachis hypogaea HOM05D000671 ORTHO05D004414 1.5e-07 59.3 57 50.9
CARHR022220 Cardamine hirsuta HOM05D000671 ORTHO05D004414 1.5e-07 59.3 55 54.5
Lj7C339G13 Lonicera japonica HOM05D000671 ORTHO05D004414 1.5e-07 59.3 56 53.6
Nitab4.5_0000633g0200 Nicotiana tabacum HOM05D000671 ORTHO05D004414 1.5e-07 59.3 54 51.9
Nitab4.5_0004882g0020 Nicotiana tabacum HOM05D000671 ORTHO05D004414 1.5e-07 59.3 54 51.9
HanXRQChr05g0150541 Helianthus annuus HOM05D000671 ORTHO05D004414 1.9e-07 58.9 54 50.0
Sopen06g020510 Solanum pennellii HOM05D000671 ORTHO05D004414 2.5e-07 58.5 54 53.7
arahy.Tifrunner.gnm1.ann1.NY6I93 Arachis hypogaea HOM05D000671 ORTHO05D004414 3.3e-07 58.2 57 49.1
CAN.G1040.13 Capsicum annuum HOM05D000671 ORTHO05D004414 3.3e-07 58.2 54 50.0
AUR62019045 Chenopodium quinoa HOM05D000671 ORTHO05D004414 3.3e-07 58.2 54 50.0
AUR62027885 Chenopodium quinoa HOM05D000671 ORTHO05D004414 3.3e-07 58.2 56 53.6
Eucgr.F03784 Eucalyptus grandis HOM05D000671 ORTHO05D004414 3.3e-07 58.2 54 48.1
Atru.chr13.1447 Acer truncatum HOM05D000671 ORTHO05D004414 4.3e-07 57.8 56 48.2
Atru.chr13.1471 Acer truncatum HOM05D000671 ORTHO05D004414 4.3e-07 57.8 56 48.2
Aqoxy6G00204 Aquilegia oxysepala HOM05D000671 ORTHO05D004414 4.3e-07 57.8 54 46.3
Cc00_g04260 Coffea canephora HOM05D000671 ORTHO05D004414 4.3e-07 57.8 54 51.9
DCAR_017423 Daucus carota HOM05D000671 ORTHO05D004414 4.3e-07 57.8 54 50.0
Duzib041G0671 Durio zibethinus HOM05D000671 ORTHO05D004414 4.3e-07 57.8 57 50.9
Glyma.14G148900 Glycine max HOM05D000671 ORTHO05D004414 4.3e-07 57.8 56 48.2
Dinv27322 Davidia involucrata HOM05D000671 ORTHO05D004414 5.6e-07 57.4 54 51.9
Nn1g08751 Nelumbo nucifera HOM05D000671 ORTHO05D004414 5.6e-07 57.4 54 44.4
Potri.005G177200 Populus trichocarpa HOM05D000671 ORTHO05D004414 5.6e-07 57.4 56 48.2
QL09p035226 Quercus lobata HOM05D000671 ORTHO05D004414 5.6e-07 57.4 62 50.0
SGA_v2.0_scaffold52G18971 Striga asiatica HOM05D000671 ORTHO05D004414 5.6e-07 57.4 66 43.9
ECA246G4462 Erigeron canadensis HOM05D000671 ORTHO05D004414 7.3e-07 57.0 53 49.1
RhsimUnG0093100 Rhododendron simsii HOM05D000671 ORTHO05D004414 7.3e-07 57.0 54 48.1
Sp5g32760 Schrenkiella parvula HOM05D000671 ORTHO05D004414 7.3e-07 57.0 55 52.7
TWI36G0716 Tripterygium wilfordii HOM05D000671 ORTHO05D004414 7.3e-07 57.0 55 50.9
GSVIVG01008878001 Vitis vinifera HOM05D000671 ORTHO05D004414 9.6e-07 56.6 54 48.1
DCAR_014090 Daucus carota HOM05D000671 ORTHO05D004414 1.2e-06 56.2 56 50.0
Migut.N03285 Erythranthe guttata HOM05D000671 ORTHO05D004414 1.2e-06 56.2 54 44.4
vmacro00830 Vaccinium macrocarpon HOM05D000671 ORTHO05D004414 1.2e-06 56.2 54 48.1
Duzib093G1798 Durio zibethinus HOM05D000671 ORTHO05D004414 1.6e-06 55.8 55 49.1
Medtr1g030320 Medicago truncatula HOM05D000671 ORTHO05D004414 1.6e-06 55.8 56 44.6
Potri.002G084500 Populus trichocarpa HOM05D000671 ORTHO05D004414 1.6e-06 55.8 56 46.4
Sc01g0001160 Simmondsia chinensis HOM05D000671 ORTHO05D004414 1.6e-06 55.8 56 51.8
Psat5g132080 Pisum sativum HOM05D000671 ORTHO05D004414 2.1e-06 55.5 55 49.1
TPR.G24054 Trifolium pratense HOM05D000671 ORTHO05D004414 2.1e-06 55.5 56 46.4
Cfa016010 Carpinus fangiana HOM05D000671 ORTHO05D004414 2.8e-06 55.1 56 50.0
Duzib116G0465 Durio zibethinus HOM05D000671 ORTHO05D004414 2.8e-06 55.1 55 49.1
Lalb_Chr08g0241471 Lupinus albus HOM05D000671 ORTHO05D004414 2.8e-06 55.1 56 46.4
TPR.G25797 Trifolium pratense HOM05D000671 ORTHO05D004414 2.8e-06 55.1 56 44.6
TWI56G0190 Tripterygium wilfordii HOM05D000671 ORTHO05D004414 2.8e-06 55.1 55 50.9
TAR376G0502 Trochodendron aralioides HOM05D000671 ORTHO05D004414 2.8e-06 55.1 57 50.9
Aa31LG7G5830 Aethionema arabicum HOM05D000671 ORTHO05D004414 3.6e-06 54.7 57 49.1
ATR1134G100 Amborella trichopoda HOM05D000671 ORTHO05D004414 3.6e-06 54.7 55 47.3
CiPaw.05G222600 Carya illinoinensis HOM05D000671 ORTHO05D004414 3.6e-06 54.7 54 46.3
Aa31LG4G7720 Aethionema arabicum HOM05D000671 ORTHO05D004414 4.7e-06 54.3 55 50.9
BcaB02g07114 Brassica carinata HOM05D000671 ORTHO05D004414 4.7e-06 54.3 55 50.9
BcaC06g36662 Brassica carinata HOM05D002350 ORTHO05D000091 4.7e-06 54.3 55 50.9
C06p31160 Brassica napus HOM05D000671 ORTHO05D004414 4.7e-06 54.3 55 50.9
BolC7t40574H Brassica oleracea HOM05D000671 ORTHO05D105625 4.7e-06 54.3 55 50.9
BraA07t30439Z Brassica rapa HOM05D000671 ORTHO05D004414 4.7e-06 54.3 55 50.9
Manes.02G162600 Manihot esculenta HOM05D000671 ORTHO05D004414 4.7e-06 54.3 56 44.6
Sed0003658 Sechium edule HOM05D000671 ORTHO05D004414 4.7e-06 54.3 62 43.5
CARHR071120 Cardamine hirsuta HOM05D000671 ORTHO05D004414 6.2e-06 53.9 56 50.0
Ca_12614_v3 Cicer arietinum L. HOM05D000671 ORTHO05D004414 6.2e-06 53.9 59 42.4
Lj1g0021857 Lotus japonicus HOM05D000671 ORTHO05D004414 6.2e-06 53.9 56 41.1
Lalb_Chr11g0065871 Lupinus albus HOM05D000671 ORTHO05D004414 6.2e-06 53.9 56 44.6
Carub.0002s2450 Capsella rubella HOM05D000671 ORTHO05D004414 8.1e-06 53.5 55 50.9


User provided reference genes

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