Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001015g0030 Nicotiana tabacum HOM05D001166 ORTHO05D000992 4.0e-48 194.5 103 100.0
Nitab4.5_0007648g0020 Nicotiana tabacum HOM05D001166 ORTHO05D000992 1.5e-26 122.9 78 87.2
Solyc09g020000.3 Solanum lycopersicum HOM05D001166 ORTHO05D000992 8.4e-22 107.1 69 82.6
Sopen09g012830 Solanum pennellii HOM05D001166 ORTHO05D000992 3.2e-21 105.1 69 81.2
Dinv28778 Davidia involucrata HOM05D001166 ORTHO05D000992 7.8e-20 100.5 77 75.3
Dinv07641 Davidia involucrata HOM05D001166 ORTHO05D000992 1.3e-19 99.8 77 75.3
Peaxi162Scf00390g00017 Petunia axillaris HOM05D001166 ORTHO05D000992 1.5e-18 96.3 69 71.0
Peaxi162Scf00390g00025 Petunia axillaris HOM05D001166 ORTHO05D000992 9.6e-18 93.6 69 69.6
Hma1.2p1_0161F.1_g071800 Hydrangea macrophylla HOM05D001166 ORTHO05D000992 2.8e-17 92.0 77 71.4
Nitab4.5_0004982g0050 Nicotiana tabacum HOM05D001166 ORTHO05D000992 8.1e-17 90.5 69 72.5
CSS0018593 Camellia sinensis var. sinensis HOM05D001166 ORTHO05D000992 1.8e-16 89.4 70 72.9
CAN.G253.2 Capsicum annuum HOM05D001166 ORTHO05D000992 1.8e-16 89.4 69 75.4
Nitab4.5_0001348g0190 Nicotiana tabacum HOM05D001166 ORTHO05D000992 2.4e-16 89.0 69 71.0
Rhsim01G0246500 Rhododendron simsii HOM05D001166 ORTHO05D000992 9.0e-16 87.0 78 69.2
Actinidia34521 Actinidia chinensis HOM05D001166 ORTHO05D000992 7.6e-15 84.0 78 62.8
CSS0014252 Camellia sinensis var. sinensis HOM05D001166 ORTHO05D000992 9.9e-15 83.6 81 66.7
Lj1A106T20 Lonicera japonica HOM05D001166 ORTHO05D000992 9.9e-15 83.6 79 64.6
Actinidia23811 Actinidia chinensis HOM05D001166 ORTHO05D000992 3.8e-14 81.6 78 61.5
Hma1.2p1_1756F.1_g301030 Hydrangea macrophylla HOM05D001166 ORTHO05D000992 6.4e-14 80.9 69 65.2
Lj2A1109G68 Lonicera japonica HOM05D001166 ORTHO05D000992 4.2e-13 78.2 62 67.7
DCAR_018603 Daucus carota HOM05D001166 ORTHO05D000992 1.2e-12 76.6 75 57.3
Lsat_1_v5_gn_9_15841 Lactuca sativa HOM05D001166 ORTHO05D000992 6.0e-12 74.3 73 61.6
vmacro14673 Vaccinium macrocarpon HOM05D001166 ORTHO05D000992 6.0e-12 74.3 80 63.8
Cc01_g15780 Coffea canephora HOM05D001166 ORTHO05D000992 1.0e-11 73.6 87 51.7
CAN.G874.46 Capsicum annuum HOM05D001166 ORTHO05D000992 3.9e-11 71.6 69 55.1
Oeu058213.1 Olea europaea HOM05D001166 ORTHO05D000992 1.1e-10 70.1 77 53.2
SGA_v2.0_scaffold77G25325 Striga asiatica HOM05D001166 ORTHO05D000992 1.1e-10 70.1 87 49.4
MSTRG.18516 Avicennia marina HOM05D001166 ORTHO05D000992 1.5e-10 69.7 85 51.8
HanXRQChr11g0347341 Helianthus annuus HOM05D001166 ORTHO05D000992 1.5e-10 69.7 65 60.0
Migut.N00689 Erythranthe guttata HOM05D001166 ORTHO05D000992 1.9e-10 69.3 83 53.0
Actinidia11653 Actinidia chinensis HOM05D001166 ORTHO05D000992 5.6e-10 67.8 77 59.7
Oeu064701.1 Olea europaea HOM05D001166 ORTHO05D000992 5.6e-10 67.8 77 51.9
ECA247G1442 Erigeron canadensis HOM05D001091 ORTHO05D001020 7.3e-10 67.4 71 59.2
Migut.D00760 Erythranthe guttata HOM05D001166 ORTHO05D000992 7.3e-10 67.4 73 53.4
MSTRG.12734 Avicennia marina HOM05D001166 ORTHO05D000992 9.6e-10 67.0 78 55.1
Duzib138G0233 Durio zibethinus HOM05D001166 ORTHO05D000992 1.6e-09 66.2 79 50.6
ECA248G1315 Erigeron canadensis HOM05D001166 ORTHO05D000992 2.4e-08 62.4 65 55.4
Gohir.A11G145100 Gossypium hirsutum HOM05D001166 ORTHO05D000992 2.4e-08 62.4 79 48.1
Gohir.D11G151500 Gossypium hirsutum HOM05D001166 ORTHO05D000992 2.4e-08 62.4 79 48.1
Gorai.007G162200 Gossypium raimondii HOM05D001166 ORTHO05D000992 2.4e-08 62.4 79 48.1
HanXRQChr08g0231271 Helianthus annuus HOM05D001166 ORTHO05D000992 2.4e-08 62.4 69 56.5
Ciclev10016354m.g Citrus clementina HOM05D001166 ORTHO05D000992 4.0e-08 61.6 78 50.0
Actinidia23133 Actinidia chinensis HOM05D001166 ORTHO05D000992 9.0e-08 60.5 43 67.4
COL.COLO4_04514 Corchorus olitorius HOM05D001166 ORTHO05D000992 1.2e-07 60.1 78 48.7
Rhsim13G0055700 Rhododendron simsii HOM05D001166 ORTHO05D000992 1.2e-07 60.1 77 53.2
Gohir.D08G058600 Gossypium hirsutum HOM05D001166 ORTHO05D000992 2.0e-07 59.3 85 48.2
Thecc.01G204900 Theobroma cacao HOM05D001166 ORTHO05D000992 2.6e-07 58.9 74 48.6
TWI18G0984 Tripterygium wilfordii HOM05D001166 ORTHO05D000992 2.6e-07 58.9 84 48.8
BcaC01g04276 Brassica carinata HOM05D001166 ORTHO05D000992 3.4e-07 58.5 74 52.7
C03p42950 Brassica napus HOM05D001166 ORTHO05D000992 3.4e-07 58.5 74 52.7
BolC3t16563H Brassica oleracea HOM05D001166 ORTHO05D000992 3.4e-07 58.5 74 52.7
Gohir.A07G162100 Gossypium hirsutum HOM05D001166 ORTHO05D000992 3.4e-07 58.5 77 48.1
Gohir.D07G168600 Gossypium hirsutum HOM05D001166 ORTHO05D000992 3.4e-07 58.5 77 48.1
Gorai.N001000 Gossypium raimondii HOM05D001166 ORTHO05D000992 3.4e-07 58.5 77 48.1
BraA03t12712Z Brassica rapa HOM05D001166 ORTHO05D000992 4.5e-07 58.2 77 53.2
SGA_v2.0_scaffold95G28681 Striga asiatica HOM05D001166 ORTHO05D000992 7.6e-07 57.4 83 45.8
Cpa.g.sc8.22 Carica papaya HOM05D001166 ORTHO05D000992 1.7e-06 56.2 83 48.2
Gorai.004G060500 Gossypium raimondii HOM05D001166 ORTHO05D000992 1.7e-06 56.2 85 45.9
unitig_52.g17417 Utricularia gibba HOM05D001166 ORTHO05D000992 2.9e-06 55.5 64 50.0
SalBow2G2393 Salvia bowleyana HOM05D001166 ORTHO05D000992 3.8e-06 55.1 85 43.5
SalBow6G3218 Salvia bowleyana HOM05D001166 ORTHO05D000992 3.8e-06 55.1 83 47.0
TWI36G0272 Tripterygium wilfordii HOM05D001166 ORTHO05D000992 3.8e-06 55.1 84 50.0
TWI36G0628 Tripterygium wilfordii HOM05D001166 ORTHO05D000992 3.8e-06 55.1 84 50.0
AL3G18910 Arabidopsis lyrata HOM05D001166 ORTHO05D000992 4.9e-06 54.7 77 50.6
BcaB04g21286 Brassica carinata HOM05D001166 ORTHO05D000992 8.4e-06 53.9 70 50.0
Duzib211G0070 Durio zibethinus HOM05D001166 ORTHO05D000992 8.4e-06 53.9 79 44.3


User provided reference genes

Program Settings