Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000996g0010 Nicotiana tabacum HOM05D006962 ORTHO05D008696 3.8e-106 388.3 208 100.0
Nitab4.5_0006369g0010 Nicotiana tabacum HOM05D006962 ORTHO05D008696 3.0e-95 352.1 213 90.6
PGSC0003DMG400034312 Solanum tuberosum HOM05D006962 ORTHO05D008696 1.4e-68 263.5 211 70.6
Peaxi162Scf00128g01332 Petunia axillaris HOM05D006962 ORTHO05D008696 1.9e-65 253.1 227 65.2
Solyc05g015640.3 Solanum lycopersicum HOM05D006962 ORTHO05D008696 1.8e-63 246.5 210 68.6
Sopen05g011100 Solanum pennellii HOM05D006962 ORTHO05D008696 2.8e-61 239.2 210 65.2
CAN.G1124.2 Capsicum annuum HOM05D006962 ORTHO05D008696 6.6e-50 201.4 159 70.4
Cc11_g17050 Coffea canephora HOM05D006962 ORTHO05D008696 5.6e-33 145.2 228 43.0
MSTRG.13306 Avicennia marina HOM05D006962 ORTHO05D008696 1.6e-27 127.1 212 42.9
CSS0033119 Camellia sinensis var. sinensis HOM05D006962 ORTHO05D008696 1.7e-26 123.6 219 38.8
Dinv17575 Davidia involucrata HOM05D006962 ORTHO05D008696 3.9e-26 122.5 231 39.8
Thecc.02G205200 Theobroma cacao HOM05D006962 ORTHO05D008696 3.9e-26 122.5 224 39.3
Gohir.A04G140400 Gossypium hirsutum HOM05D006962 ORTHO05D008696 1.9e-25 120.2 221 36.7
QL03p052240 Quercus lobata HOM05D006962 ORTHO05D008696 2.5e-25 119.8 226 38.9
Gohir.D04G183600 Gossypium hirsutum HOM05D006962 ORTHO05D008696 3.3e-25 119.4 222 38.3
HanXRQChr08g0214941 Helianthus annuus HOM05D006962 ORTHO05D008696 2.1e-24 116.7 145 44.8
Gorai.012G176600 Gossypium raimondii HOM05D006962 ORTHO05D008696 2.8e-24 116.3 222 37.4
CiPaw.05G108100 Carya illinoinensis HOM05D006962 ORTHO05D008696 3.6e-24 115.9 231 37.7
CANSAT01G0828 Cannabis sativa HOM05D006962 ORTHO05D008696 1.5e-22 110.5 212 37.3
Cfa009377 Carpinus fangiana HOM05D006962 ORTHO05D008696 3.4e-22 109.4 222 36.5
Lsat_1_v5_gn_4_641 Lactuca sativa HOM05D006962 ORTHO05D008696 5.8e-22 108.6 219 34.7
Sc14g0009120 Simmondsia chinensis HOM05D006962 ORTHO05D008696 5.8e-22 108.6 229 37.6
ClCG06G002190 Citrullus lanatus HOM05D006962 ORTHO05D008696 7.6e-22 108.2 208 39.9
MELO3C022311.2 Cucumis melo HOM05D006962 ORTHO05D008696 7.6e-22 108.2 208 38.5
TWI75G0385 Tripterygium wilfordii HOM05D006962 ORTHO05D008696 1.7e-21 107.1 216 35.6
Medtr3g085060 Medicago truncatula HOM05D006962 ORTHO05D008696 2.9e-21 106.3 206 37.9
GSVIVG01010505001 Vitis vinifera HOM05D006962 ORTHO05D008696 3.8e-21 105.9 226 37.6
Manes.13G010300 Manihot esculenta HOM05D006962 ORTHO05D008696 4.9e-21 105.5 208 38.0
Psat5g097440 Pisum sativum HOM05D006962 ORTHO05D008696 8.4e-21 104.8 201 38.8
COL.COLO4_20424 Corchorus olitorius HOM05D006962 ORTHO05D008696 1.1e-20 104.4 215 34.4
Glyma.18G005200 Glycine max HOM05D006962 ORTHO05D008696 2.4e-20 103.2 192 38.0
Hma1.2p1_0657F.1_g197165 Hydrangea macrophylla HOM05D006962 ORTHO05D008696 2.4e-20 103.2 117 50.4
Hma1.2p1_0967F.1_g242360 Hydrangea macrophylla HOM05D006962 ORTHO05D008696 2.4e-20 103.2 117 50.4
Duzib251G0823 Durio zibethinus HOM05D006962 ORTHO05D008696 5.4e-20 102.1 212 37.7
Nn3g16434 Nelumbo nucifera HOM05D006962 ORTHO05D008696 9.3e-20 101.3 222 35.1
Ca_16448_v3 Cicer arietinum L. HOM05D006962 ORTHO05D008696 1.6e-19 100.5 210 37.6
ECA234G1956 Erigeron canadensis HOM05D006962 ORTHO05D008696 2.7e-19 99.8 107 45.8
MBI07_g28246_MAGBIO Magnolia biondii HOM05D006962 ORTHO05D008696 4.6e-19 99.0 218 37.2
Potri.003G170700 Populus trichocarpa HOM05D006962 ORTHO05D008696 4.6e-19 99.0 218 34.4
MELO3C032628.2 Cucumis melo HOM05D006962 ORTHO05D008696 6.0e-19 98.6 153 36.6
CsaV3_4G003050 Cucumis sativus L. HOM05D006962 ORTHO05D008696 7.8e-19 98.2 210 32.4
Eucgr.B03508 Eucalyptus grandis HOM05D006962 ORTHO05D008696 7.8e-19 98.2 220 33.6
arahy.Tifrunner.gnm1.ann1.AWLH2F Arachis hypogaea HOM05D006962 ORTHO05D008696 1.3e-18 97.4 215 34.9
MBI07_g11269_MAGBIO Magnolia biondii HOM05D006962 ORTHO05D008696 1.7e-18 97.1 215 36.7
TAR629G1477 Trochodendron aralioides HOM05D006962 ORTHO05D008696 1.7e-18 97.1 231 35.9
Lj6g0020338 Lotus japonicus HOM05D006962 ORTHO05D008696 2.3e-18 96.7 205 35.6
Phvul.001G262900 Phaseolus vulgaris HOM05D006962 ORTHO05D008696 2.3e-18 96.7 201 32.8
Ciclev10032798m.g Citrus clementina HOM05D006962 ORTHO05D008696 6.6e-18 95.1 226 33.2
THA.LOC104807506 Tarenaya hassleriana HOM05D006962 ORTHO05D008696 6.6e-18 95.1 218 34.9
Prupe.1G224100 Prunus persica HOM05D006962 ORTHO05D008696 8.7e-18 94.7 228 34.6
Haze_12436 Corylus avellana HOM05D006962 ORTHO05D008696 1.1e-17 94.4 236 33.1
CsaV3_6G008260 Cucumis sativus L. HOM05D006962 ORTHO05D008696 1.1e-17 94.4 207 38.6
Sabra03G0124800 Salix brachista HOM05D006962 ORTHO05D008696 1.5e-17 94.0 217 35.9
TPR.G17769 Trifolium pratense HOM05D006962 ORTHO05D008696 1.5e-17 94.0 224 34.8
Rhsim12G0024900 Rhododendron simsii HOM05D006962 ORTHO05D008696 2.5e-17 93.2 195 34.9
Migut.E00010 Erythranthe guttata HOM05D006962 ORTHO05D008696 5.6e-17 92.0 219 31.1
Potri.001G057700 Populus trichocarpa HOM05D006962 ORTHO05D008696 7.3e-17 91.7 178 37.6
VMungo1383G1469 Vigna mungo HOM05D006962 ORTHO05D008696 7.3e-17 91.7 203 32.0
PGR102G1052 Punica granatum HOM05D006962 ORTHO05D008696 1.3e-16 90.9 146 40.4
Sed0011154 Sechium edule HOM05D006962 ORTHO05D008696 1.3e-16 90.9 146 39.7
ClCG07G015460 Citrullus lanatus HOM05D006962 ORTHO05D008696 2.8e-16 89.7 218 31.2
Lalb_Chr23g0278151 Lupinus albus HOM05D006962 ORTHO05D008696 2.8e-16 89.7 159 35.2
TAR636G2109 Trochodendron aralioides HOM05D006962 ORTHO05D008696 2.8e-16 89.7 229 36.2
Cpa.g.sc43.75 Carica papaya HOM05D006962 ORTHO05D008696 3.6e-16 89.4 173 34.1
Sabra01G0041700 Salix brachista HOM05D000660 ORTHO05D000766 3.6e-16 89.4 197 36.0
AL1G40700 Arabidopsis lyrata HOM05D006962 ORTHO05D008696 6.2e-16 88.6 202 33.2
Gohir.A03G124600 Gossypium hirsutum HOM05D006962 ORTHO05D008696 6.2e-16 88.6 211 34.6
Gohir.D02G147600 Gossypium hirsutum HOM05D006962 ORTHO05D008696 6.2e-16 88.6 211 34.1
SGA_v2.0_scaffold87G27164 Striga asiatica HOM05D006962 ORTHO05D008696 8.1e-16 88.2 208 35.1
Atru.chr11.2343 Acer truncatum HOM05D006962 ORTHO05D008696 1.4e-15 87.4 133 39.1
Ah.03g136040 Amaranthus hybridus HOM05D006962 ORTHO05D008696 1.4e-15 87.4 202 37.1
FvH4_4g23570 Fragaria vesca HOM05D006962 ORTHO05D008696 1.4e-15 87.4 211 36.0
BcaC05g26736 Brassica carinata HOM05D006962 ORTHO05D008696 2.4e-15 86.7 192 35.4
Gorai.005G165400 Gossypium raimondii HOM05D006962 ORTHO05D008696 3.1e-15 86.3 211 34.1
Actinidia08062 Actinidia chinensis HOM05D006962 ORTHO05D008696 5.3e-15 85.5 158 39.9
AUR62028912 Chenopodium quinoa HOM05D006962 ORTHO05D008696 5.3e-15 85.5 172 36.6
A09p38640 Brassica napus HOM05D006962 ORTHO05D008696 6.9e-15 85.1 178 33.7
BolC5t31319H Brassica oleracea HOM05D006962 ORTHO05D008696 6.9e-15 85.1 178 34.3
BraA09t39370Z Brassica rapa HOM05D006962 ORTHO05D008696 6.9e-15 85.1 178 33.7
Glyma.11G251800 Glycine max HOM05D006962 ORTHO05D008696 6.9e-15 85.1 133 38.3
BcaC05g26545 Brassica carinata HOM05D006962 ORTHO05D008696 1.2e-14 84.3 222 32.9
C05p26000 Brassica napus HOM05D006962 ORTHO05D008696 1.2e-14 84.3 178 34.3
C07p17910 Brassica napus HOM05D006962 ORTHO05D008696 1.2e-14 84.3 165 37.0
BolC7t42297H Brassica oleracea HOM05D006962 ORTHO05D008696 1.5e-14 84.0 165 37.0
PSO017G7099 Papaver somniferum HOM05D006962 ORTHO05D008696 4.5e-14 82.4 139 37.4
PSO478G2808 Papaver somniferum HOM05D006962 ORTHO05D008696 5.8e-14 82.0 128 38.3
Hund25473 Selenicereus undatus HOM05D006962 ORTHO05D008696 5.8e-14 82.0 204 35.3
AUR62005637 Chenopodium quinoa HOM05D006962 ORTHO05D008696 7.6e-14 81.6 183 35.5
MD16G1121100 Malus domestica HOM05D006962 ORTHO05D008696 7.6e-14 81.6 211 32.2
RcHm_v2.0_Chr4g0429971 Rosa chinensis HOM05D006962 ORTHO05D008696 7.6e-14 81.6 206 35.0
BcaNung06812 Brassica carinata HOM05D006962 ORTHO05D008696 1.3e-13 80.9 167 37.1
HPP92_023534 Vanilla planifolia HOM05D006962 ORTHO05D008696 2.9e-13 79.7 164 36.6
Sp1g23540 Schrenkiella parvula HOM05D006962 ORTHO05D008696 3.8e-13 79.3 210 32.9
Thhalv10008828m.g Eutrema salsugineum HOM05D006962 ORTHO05D008696 1.9e-12 77.0 176 32.4
CARHR026870 Cardamine hirsuta HOM05D006962 ORTHO05D008696 2.4e-12 76.6 213 31.0
CDE05G3434 Ceratophyllum demersum HOM05D006962 ORTHO05D008696 3.2e-12 76.3 170 32.4
DCAR_007000 Daucus carota HOM05D006962 ORTHO05D008696 4.2e-12 75.9 248 27.8
Gohir.D03G043133 Gossypium hirsutum HOM05D006962 ORTHO05D008696 4.2e-12 75.9 100 42.0
Aqoxy3G01577 Aquilegia oxysepala HOM05D006962 ORTHO05D008696 9.3e-12 74.7 168 35.1
A07p11980 Brassica napus HOM05D006962 ORTHO05D008696 3.5e-11 72.8 168 33.9
Carub.0001s2583 Capsella rubella HOM05D006962 ORTHO05D008696 4.6e-11 72.4 208 31.2
BraA07t28983Z Brassica rapa HOM05D006962 ORTHO05D008696 7.9e-11 71.6 164 34.1
Aa31LG7G9900 Aethionema arabicum HOM05D006962 ORTHO05D008696 1.0e-10 71.2 168 31.5
ATR0561G196 Amborella trichopoda HOM05D006962 ORTHO05D008696 1.3e-10 70.9 134 33.6
Gorai.003G044100 Gossypium raimondii HOM05D006962 ORTHO05D008696 1.3e-10 70.9 100 42.0
TAR629G0477 Trochodendron aralioides HOM05D006962 ORTHO05D008696 2.3e-10 70.1 64 57.8
Os02g0509600 Oryza sativa ssp. japonica HOM05D006962 ORTHO05D008696 6.7e-10 68.6 202 30.2
BcaB03g14005 Brassica carinata HOM05D006962 ORTHO05D008696 1.1e-09 67.8 166 32.5
Zm00001eb180910 Zea mays HOM05D006962 ORTHO05D008696 1.3e-08 64.3 213 27.2
AT1G27300 Arabidopsis thaliana HOM05D006962 ORTHO05D008696 3.7e-08 62.8 211 29.9
Zm00001eb241800 Zea mays HOM05D006962 ORTHO05D008696 1.2e-06 57.8 210 27.6


User provided reference genes

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