Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000991g0090 Nicotiana tabacum HOM05D000125 ORTHO05D013275 6.2e-154 547.4 264 100.0
PGSC0003DMG400034736 Solanum tuberosum HOM05D000125 ORTHO05D013275 4.9e-58 228.8 326 43.3
Nitab4.5_0003832g0020 Nicotiana tabacum HOM05D000125 ORTHO05D013275 7.3e-54 214.9 256 48.0
Peaxi162Scf00003g04240 Petunia axillaris HOM05D000125 ORTHO05D013275 9.9e-51 204.5 239 47.7
PGSC0003DMG400011429 Solanum tuberosum HOM05D000125 ORTHO05D013275 9.9e-51 204.5 414 37.0
Peaxi162Scf00003g00427 Petunia axillaris HOM05D000125 ORTHO05D013275 4.9e-50 202.2 396 36.4
Nitab4.5_0003832g0010 Nicotiana tabacum HOM05D000125 ORTHO05D013275 2.9e-42 176.4 375 35.2
CAN.G1161.14 Capsicum annuum HOM05D000125 ORTHO05D013275 2.7e-32 143.3 260 37.7
Nitab4.5_0006768g0010 Nicotiana tabacum HOM05D000125 ORTHO05D013275 1.9e-30 137.1 160 46.2
PGSC0003DMG400042748 Solanum tuberosum HOM05D000125 ORTHO05D013275 1.9e-30 137.1 86 73.3
CAN.G1161.17 Capsicum annuum HOM05D000125 ORTHO05D013275 2.6e-27 126.7 181 45.9
Sopen12g007990 Solanum pennellii HOM05D000125 ORTHO05D013275 3.2e-25 119.8 86 61.6
CAN.G1161.18 Capsicum annuum HOM05D000125 ORTHO05D013275 1.0e-23 114.8 145 43.4
Nitab4.5_0000013g0350 Nicotiana tabacum HOM05D000125 ORTHO05D022976 3.9e-23 112.8 295 27.8
Nitab4.5_0004058g0030 Nicotiana tabacum HOM05D000125 ORTHO05D022976 9.6e-22 108.2 291 27.8
Solyc08g014370.1 Solanum lycopersicum HOM05D000125 ORTHO05D022976 2.1e-21 107.1 384 25.5
Peaxi162Scf00075g01212 Petunia axillaris HOM05D000125 ORTHO05D022976 2.0e-19 100.5 288 26.0
PGSC0003DMG400043599 Solanum tuberosum HOM05D000125 ORTHO05D022976 4.5e-19 99.4 381 24.1
PGSC0003DMG400018897 Solanum tuberosum HOM05D000125 ORTHO05D013275 1.7e-18 97.4 59 72.9
Dinv43494 Davidia involucrata HOM05D000125 ORTHO05D000807 1.5e-11 74.3 168 30.4
AT5G03360 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 3.8e-10 69.7 167 26.3
Nitab4.5_0000991g0100 Nicotiana tabacum HOM05D000125 ORTHO05D013275 5.0e-10 69.3 47 68.1
COL.COLO4_18866 Corchorus olitorius HOM05D000125 ORTHO05D000120 6.5e-10 68.9 161 26.1
Thhalv10012961m.g Eutrema salsugineum HOM05D000125 ORTHO05D000120 4.6e-08 62.8 197 26.4
PGSC0003DMG400010439 Solanum tuberosum HOM05D000125 ORTHO05D000807 6.1e-08 62.4 82 39.0
COL.COLO4_27934 Corchorus olitorius HOM05D000125 ORTHO05D000120 7.9e-08 62.0 161 24.8
CAN.G129.40 Capsicum annuum HOM05D000125 ORTHO05D000807 1.3e-07 61.2 163 28.8
CAN.G129.39 Capsicum annuum HOM05D000125 ORTHO05D000807 1.8e-07 60.8 169 27.2
Gohir.A02G037200 Gossypium hirsutum HOM05D000125 ORTHO05D000120 1.8e-07 60.8 164 25.0
Gorai.013G012000 Gossypium raimondii HOM05D000125 ORTHO05D000120 1.8e-07 60.8 165 30.3
CAN.G129.36 Capsicum annuum HOM05D000125 ORTHO05D000807 2.3e-07 60.5 156 26.3
COL.COLO4_08796 Corchorus olitorius HOM05D000125 ORTHO05D000120 2.3e-07 60.5 172 26.2
Solyc02g068680.1 Solanum lycopersicum HOM05D000125 ORTHO05D000807 2.3e-07 60.5 82 36.6
Sopen02g017850 Solanum pennellii HOM05D000125 ORTHO05D000807 2.3e-07 60.5 82 36.6
Hma1.2p1_1345F.1_g277170 Hydrangea macrophylla HOM05D000125 ORTHO05D000807 3.0e-07 60.1 73 45.2
HanXRQChr16g0520401 Helianthus annuus HOM05D000125 ORTHO05D000807 6.7e-07 58.9 117 33.3
Carub.0006s2933 Capsella rubella HOM05D000125 ORTHO05D000120 1.1e-06 58.2 185 26.5
Peaxi162Scf00319g00072 Petunia axillaris HOM05D000125 ORTHO05D000807 1.5e-06 57.8 171 29.2
CAN.G129.37 Capsicum annuum HOM05D000125 ORTHO05D000807 1.9e-06 57.4 165 26.1
COL.COLO4_25765 Corchorus olitorius HOM05D000125 ORTHO05D000120 1.9e-06 57.4 165 24.2
Cc02_g27000 Coffea canephora HOM05D000125 ORTHO05D000807 3.3e-06 56.6 114 35.1
Gohir.A10G209600 Gossypium hirsutum HOM05D000125 ORTHO05D000120 3.3e-06 56.6 164 25.6
Hma1.2p1_0505F.1_g168220 Hydrangea macrophylla HOM05D000125 ORTHO05D000807 3.3e-06 56.6 155 27.7
QL03p004456 Quercus lobata HOM05D000125 ORTHO05D000120 3.3e-06 56.6 165 26.7
CAN.G149.15 Capsicum annuum HOM05D000125 ORTHO05D013275 4.3e-06 56.2 79 38.0
COL.COLO4_14740 Corchorus olitorius HOM05D000125 ORTHO05D000120 5.7e-06 55.8 174 23.6
Nitab4.5_0000468g0030 Nicotiana tabacum HOM05D000125 ORTHO05D000807 5.7e-06 55.8 161 25.5
Peaxi162Scf00149g00023 Petunia axillaris HOM05D000125 ORTHO05D013275 7.4e-06 55.5 101 33.7
CAN.G129.41 Capsicum annuum HOM05D000125 ORTHO05D000807 9.7e-06 55.1 164 26.2
COL.COLO4_25798 Corchorus olitorius HOM05D000125 ORTHO05D000120 9.7e-06 55.1 137 24.8
Nitab4.5_0004824g0050 Nicotiana tabacum HOM05D000125 ORTHO05D000807 9.7e-06 55.1 170 26.5


User provided reference genes

Program Settings