Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000989g0070 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.3e-32 141.0 66 100.0
Nitab4.5_0001953g0060 Nicotiana tabacum HOM05D003574 ORTHO05D002175 8.9e-17 89.7 60 73.3
Nitab4.5_0000069g0280 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.1e-14 82.8 65 66.2
Nitab4.5_0009292g0080 Nicotiana tabacum HOM05D003574 ORTHO05D285877 1.4e-14 82.4 54 77.8
Nitab4.5_0002999g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.9e-13 77.0 40 87.5
Nitab4.5_0000491g0150 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.3e-12 75.9 40 87.5
Nitab4.5_0000005g0430 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.1e-11 72.8 40 85.0
Nitab4.5_0014328g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.5e-11 71.6 40 82.5
Nitab4.5_0003185g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.6e-11 70.5 40 82.5
Nitab4.5_0001772g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.3e-11 70.1 43 74.4
Nitab4.5_0002897g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.6e-10 68.9 39 84.6
Nitab4.5_0003551g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.6e-10 68.9 39 79.5
Nitab4.5_0000043g0360 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.8e-10 68.2 38 81.6
Nitab4.5_0000101g0410 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.7e-10 67.4 37 86.5
Nitab4.5_0001168g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.7e-10 67.4 39 82.1
Nitab4.5_0002999g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.1e-10 67.0 38 81.6
Nitab4.5_0005092g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.1e-10 67.0 40 77.5
Nitab4.5_0006058g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.4e-09 65.9 40 77.5
Nitab4.5_0000141g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.8e-09 65.5 38 73.7
Nitab4.5_0001800g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.8e-09 63.5 35 82.9
Nitab4.5_0004998g0050 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.8e-09 63.5 39 71.8
Nitab4.5_0001599g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.9e-09 63.2 41 68.3
Nitab4.5_0002538g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.9e-09 63.2 41 68.3
Nitab4.5_0001643g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.2e-08 62.8 38 71.1
Nitab4.5_0002002g0090 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.2e-08 62.8 38 71.1
Nitab4.5_0003579g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.2e-08 62.8 38 71.1
Nitab4.5_0003811g0130 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.2e-08 62.8 41 68.3
Nitab4.5_0001512g0100 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.6e-08 61.6 38 68.4
Nitab4.5_0008324g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.6e-08 61.6 39 74.4
PGSC0003DMG400031332 Solanum tuberosum HOM05D000995 ORTHO05D001773 3.4e-08 61.2 35 71.4
Nitab4.5_0008368g0050 Nicotiana tabacum HOM05D003574 ORTHO05D001773 4.4e-08 60.8 38 68.4
Nitab4.5_0022390g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.4e-08 60.8 38 68.4
Nitab4.5_0026749g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.4e-08 60.8 38 68.4
Nitab4.5_0000154g0180 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.8e-08 60.5 38 65.8
Nitab4.5_0000015g0080 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.5e-08 60.1 44 61.4
Nitab4.5_0009406g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.5e-08 60.1 41 70.7
Nitab4.5_0001868g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 9.8e-08 59.7 38 68.4
Nitab4.5_0002206g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 9.8e-08 59.7 38 68.4
Nitab4.5_0000199g0130 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.3e-07 59.3 38 68.4
Nitab4.5_0001960g0100 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.3e-07 59.3 38 68.4
Solyc10g055685.1 Solanum lycopersicum HOM05D003574 ORTHO05D002175 1.3e-07 59.3 35 71.4
Sopen05g008570 Solanum pennellii HOM05D003574 ORTHO05D002175 1.3e-07 59.3 35 71.4
PGSC0003DMG400043149 Solanum tuberosum HOM05D003574 ORTHO05D002175 1.7e-07 58.9 35 71.4
MSTRG.26889 Avicennia marina HOM05D000995 ORTHO05D001773 2.2e-07 58.5 41 61.0
Nitab4.5_0000022g0180 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.2e-07 58.5 36 72.2
Nitab4.5_0002884g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.2e-07 58.5 38 68.4
PGSC0003DMG400018974 Solanum tuberosum HOM05D000995 ORTHO05D001773 2.2e-07 58.5 35 68.6
Nitab4.5_0000002g0570 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.9e-07 58.2 41 63.4
Nitab4.5_0000032g0310 Nicotiana tabacum HOM05D003574 ORTHO05D001773 2.9e-07 58.2 38 65.8
Nitab4.5_0001115g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.9e-07 58.2 40 65.0
Nitab4.5_0007583g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.9e-07 58.2 38 65.8
Nitab4.5_0007148g0080 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.7e-07 57.8 43 58.1
Nitab4.5_0000059g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.9e-07 57.4 36 69.4
Hma1.2p1_1168F.1_g263170 Hydrangea macrophylla HOM05D000995 ORTHO05D001773 8.3e-07 56.6 42 59.5
Nitab4.5_0001077g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.3e-07 56.6 40 65.0
Rhsim05G0112600 Rhododendron simsii HOM05D000995 ORTHO05D001773 8.3e-07 56.6 41 63.4
Nitab4.5_0000115g0150 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.1e-06 56.2 38 63.2
Nitab4.5_0000841g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.1e-06 56.2 44 56.8
SalBow2G3402 Salvia bowleyana HOM05D000995 ORTHO05D001773 1.1e-06 56.2 44 59.1
SalBow6G5430 Salvia bowleyana HOM05D000995 ORTHO05D001773 1.1e-06 56.2 44 59.1
SalBow8G2838 Salvia bowleyana HOM05D000995 ORTHO05D001773 1.1e-06 56.2 44 59.1
Nitab4.5_0001250g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.4e-06 55.8 38 65.8
Nitab4.5_0001488g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.4e-06 55.8 38 63.2
Nitab4.5_0001859g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.4e-06 55.8 36 72.2
Nitab4.5_0013975g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.4e-06 55.8 38 60.5
Nitab4.5_0000481g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.4e-06 55.1 41 61.0
Rhsim05G0140400 Rhododendron simsii HOM05D000995 ORTHO05D001773 2.4e-06 55.1 41 61.0
Sopen12g018970 Solanum pennellii HOM05D003574 ORTHO05D002175 2.4e-06 55.1 33 75.8
Nitab4.5_0000160g0070 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.2e-06 54.7 44 56.8
Nitab4.5_0004469g0130 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.2e-06 54.7 31 74.2
PGSC0003DMG400043951 Solanum tuberosum HOM05D003574 ORTHO05D002175 3.2e-06 54.7 35 65.7
Dinv12862 Davidia involucrata HOM05D008376 ORTHO05D010591 4.1e-06 54.3 44 56.8
Dinv36130 Davidia involucrata HOM05D008376 ORTHO05D010591 4.1e-06 54.3 44 56.8
Hma1.2p1_0120F.1_g057263 Hydrangea macrophylla HOM05D000995 ORTHO05D001773 4.1e-06 54.3 41 58.5
Hma1.2p1_0161F.1_g071390 Hydrangea macrophylla HOM05D000995 ORTHO05D001773 4.1e-06 54.3 41 58.5
Hma1.2p1_0663F.1_g198890 Hydrangea macrophylla HOM05D000995 ORTHO05D001773 4.1e-06 54.3 41 58.5
Hma1.2p1_0663F.1_g198895 Hydrangea macrophylla HOM05D000995 ORTHO05D001773 4.1e-06 54.3 41 58.5
Nitab4.5_0000079g0320 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.1e-06 54.3 36 63.9
Nitab4.5_0004188g0040 Nicotiana tabacum HOM05D003617 ORTHO05D007165 4.1e-06 54.3 41 61.0
SalBow6G6357 Salvia bowleyana HOM05D003574 ORTHO05D002175 4.1e-06 54.3 44 59.1
Hma1.2p1_0054F.1_g031030 Hydrangea macrophylla HOM05D004781 ORTHO05D001773 5.4e-06 53.9 37 62.2
Hma1.2p1_0149F.1_g066280 Hydrangea macrophylla HOM05D004781 ORTHO05D001773 5.4e-06 53.9 37 62.2
Hma1.2p1_0494F.1_g165370 Hydrangea macrophylla HOM05D000995 ORTHO05D001773 5.4e-06 53.9 37 62.2
Hma1.2p1_0901F.1_g234680 Hydrangea macrophylla HOM05D000995 ORTHO05D001773 5.4e-06 53.9 37 62.2
Nitab4.5_0005253g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.4e-06 53.9 38 60.5
Nitab4.5_0009621g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.4e-06 53.9 38 63.2
Rhsim09G0065300 Rhododendron simsii HOM05D004781 ORTHO05D001773 5.4e-06 53.9 41 58.5
Nitab4.5_0004332g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.0e-06 53.5 36 66.7
RhsimUnG0218100 Rhododendron simsii HOM05D000995 ORTHO05D001773 7.0e-06 53.5 35 65.7
Nitab4.5_0000134g0090 Nicotiana tabacum HOM05D003574 ORTHO05D002175 9.2e-06 53.1 57 45.6
Nitab4.5_0006582g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 9.2e-06 53.1 38 60.5
SalBow6G1622 Salvia bowleyana HOM05D004781 ORTHO05D001773 9.2e-06 53.1 44 56.8
PGSC0003DMG400040325 Solanum tuberosum HOM05D000995 ORTHO05D001773 9.2e-06 53.1 35 65.7


User provided reference genes

Program Settings