Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000980g0280 Nicotiana tabacum HOM05D005996 ORTHO05D007507 3.7e-64 248.1 127 100.0
Nitab4.5_0000283g0180 Nicotiana tabacum HOM05D005996 ORTHO05D007507 8.6e-61 236.9 123 99.2
Nitab4.5_0000980g0320 Nicotiana tabacum HOM05D005996 ORTHO05D007507 4.3e-60 234.6 124 97.6
Solyc01g111020.3 Solanum lycopersicum HOM05D005996 ORTHO05D007507 6.0e-54 214.2 123 87.0
Sopen01g053080 Solanum pennellii HOM05D005996 ORTHO05D007507 6.0e-54 214.2 123 87.0
CAN.G588.14 Capsicum annuum HOM05D005996 ORTHO05D007507 3.1e-50 201.8 123 83.7
Peaxi162Scf00362g01048 Petunia axillaris HOM05D005996 ORTHO05D007507 1.7e-48 196.1 123 84.6
SGA_v2.0_scaffold58G20447 Striga asiatica HOM05D005996 ORTHO05D007507 5.4e-47 191.0 126 74.6
Dinv41983 Davidia involucrata HOM05D005996 ORTHO05D007507 7.1e-47 190.7 123 76.4
Cfa005165 Carpinus fangiana HOM05D005996 ORTHO05D007507 2.3e-45 185.7 123 73.2
Migut.B00160 Erythranthe guttata HOM05D005996 ORTHO05D007507 2.3e-45 185.7 123 75.6
Cc02_g16690 Coffea canephora HOM05D005996 ORTHO05D007507 3.0e-45 185.3 123 74.0
Haze_02211 Corylus avellana HOM05D005996 ORTHO05D007507 3.9e-45 184.9 123 73.2
Prupe.8G158300 Prunus persica HOM05D005996 ORTHO05D007507 5.1e-45 184.5 122 73.8
Lj5C186G10 Lonicera japonica HOM05D005996 ORTHO05D007507 1.9e-44 182.6 126 71.4
ECA234G3379 Erigeron canadensis HOM05D005996 ORTHO05D007507 2.5e-44 182.2 123 73.2
Dinv04976 Davidia involucrata HOM05D005996 ORTHO05D007507 3.3e-44 181.8 123 71.5
HanXRQChr10g0296321 Helianthus annuus HOM05D005996 ORTHO05D007507 4.3e-44 181.4 123 74.0
CiPaw.06G125900 Carya illinoinensis HOM05D005996 ORTHO05D007507 7.3e-44 180.6 123 72.4
CANSAT25G2790 Cannabis sativa HOM05D005996 ORTHO05D007507 1.3e-43 179.9 123 74.8
MELO3C020773.2 Cucumis melo HOM05D005996 ORTHO05D007507 2.1e-43 179.1 124 70.2
CSS0029020 Camellia sinensis var. sinensis HOM05D005996 ORTHO05D007507 2.8e-43 178.7 123 72.4
CsaV3_2G015630 Cucumis sativus L. HOM05D005996 ORTHO05D007507 2.8e-43 178.7 123 69.9
TAR628G0092 Trochodendron aralioides HOM05D005996 ORTHO05D007507 3.6e-43 178.3 122 70.5
Oeu046116.1 Olea europaea HOM05D005996 ORTHO05D007507 4.8e-43 177.9 123 72.4
MD05G1113900 Malus domestica HOM05D005996 ORTHO05D007507 6.2e-43 177.6 122 70.5
Sc08g0001200 Simmondsia chinensis HOM05D005996 ORTHO05D007507 8.1e-43 177.2 123 70.7
MSTRG.16865 Avicennia marina HOM05D005996 ORTHO05D007507 1.1e-42 176.8 123 72.4
Manes.11G088413 Manihot esculenta HOM05D005996 ORTHO05D007507 1.1e-42 176.8 123 69.9
VMungo1127G0707 Vigna mungo HOM05D005996 ORTHO05D007507 1.4e-42 176.4 123 68.3
Actinidia32089 Actinidia chinensis HOM05D005996 ORTHO05D007507 1.8e-42 176.0 123 71.5
ClCG11G003680 Citrullus lanatus HOM05D005996 ORTHO05D007507 1.8e-42 176.0 120 69.2
Sed0023130 Sechium edule HOM05D005996 ORTHO05D007507 1.8e-42 176.0 123 68.3
FAN15G0761 Fragaria x ananassa HOM05D005996 ORTHO05D007507 4.0e-42 174.9 122 68.0
Nn5g29328 Nelumbo nucifera HOM05D005996 ORTHO05D007507 4.0e-42 174.9 123 69.1
Sed0010933 Sechium edule HOM05D005996 ORTHO05D007507 4.0e-42 174.9 123 69.1
Cpa.g.sc37.207 Carica papaya HOM05D005996 ORTHO05D007507 5.3e-42 174.5 123 68.3
Ciclev10027915m.g Citrus clementina HOM05D005996 ORTHO05D007507 5.3e-42 174.5 123 69.1
GSVIVG01024119001 Vitis vinifera HOM05D005996 ORTHO05D007507 1.2e-41 173.3 123 70.7
QL11p046997 Quercus lobata HOM05D005996 ORTHO05D007507 1.5e-41 172.9 123 72.4
TWI75G0427 Tripterygium wilfordii HOM05D005996 ORTHO05D007507 1.5e-41 172.9 123 68.3
FvH4_2g02240 Fragaria vesca HOM05D005996 ORTHO05D007507 2.0e-41 172.6 123 66.7
FAN20G0865 Fragaria x ananassa HOM05D005996 ORTHO05D007507 2.0e-41 172.6 122 67.2
FAN24G2882 Fragaria x ananassa HOM05D005996 ORTHO05D007507 2.0e-41 172.6 123 66.7
Atru.chr5.3202 Acer truncatum HOM05D005996 ORTHO05D007507 2.6e-41 172.2 123 67.5
FAN27G2880 Fragaria x ananassa HOM05D005996 ORTHO05D007507 2.6e-41 172.2 122 67.2
Glyma.09G218800 Glycine max HOM05D005996 ORTHO05D007507 2.6e-41 172.2 123 68.3
RcHm_v2.0_Chr6g0245931 Rosa chinensis HOM05D005996 ORTHO05D007507 2.6e-41 172.2 122 68.9
Phvul.011G036300 Phaseolus vulgaris HOM05D005996 ORTHO05D007507 3.4e-41 171.8 123 65.0
DCAR_022928 Daucus carota HOM05D005996 ORTHO05D007507 5.8e-41 171.0 123 69.1
Lsat_1_v5_gn_4_74240 Lactuca sativa HOM05D005996 ORTHO05D007507 5.8e-41 171.0 124 69.4
EL10Ac9g22244 Beta vulgaris HOM05D005996 ORTHO05D007507 7.6e-41 170.6 122 68.9
Sabra04G0111800 Salix brachista HOM05D005996 ORTHO05D007507 7.6e-41 170.6 123 66.7
Manes.11G088257 Manihot esculenta HOM05D005996 ORTHO05D007507 1.3e-40 169.9 130 66.2
Medtr4g072990 Medicago truncatula HOM05D005996 ORTHO05D007507 1.3e-40 169.9 123 68.3
Potri.004G166600 Populus trichocarpa HOM05D005996 ORTHO05D007507 1.3e-40 169.9 123 66.7
Ca_19076_v3 Cicer arietinum L. HOM05D005996 ORTHO05D007507 2.2e-40 169.1 123 66.7
PGR142G2892 Punica granatum HOM05D005996 ORTHO05D007507 4.9e-40 167.9 123 64.2
Gohir.D13G094700 Gossypium hirsutum HOM05D005996 ORTHO05D007507 6.4e-40 167.5 123 67.5
Glyma.12G033700 Glycine max HOM05D005996 ORTHO05D007507 1.4e-39 166.4 123 65.0
Gohir.A13G098800 Gossypium hirsutum HOM05D005996 ORTHO05D007507 1.4e-39 166.4 123 66.7
Gorai.001G246900 Gossypium raimondii HOM05D005996 ORTHO05D007507 2.4e-39 165.6 122 67.2
AUR62010338 Chenopodium quinoa HOM05D005996 ORTHO05D007507 3.2e-39 165.2 122 66.4
Thecc.02G069400 Theobroma cacao HOM05D005996 ORTHO05D007507 3.2e-39 165.2 123 65.9
ATR0955G004 Amborella trichopoda HOM05D005996 ORTHO05D007507 5.4e-39 164.5 123 62.6
Psat7g180560 Pisum sativum HOM05D005996 ORTHO05D007507 7.1e-39 164.1 123 65.0
TPR.G39263 Trifolium pratense HOM05D005996 ORTHO05D007507 1.2e-38 163.3 123 64.2
Eucgr.I01366 Eucalyptus grandis HOM05D005996 ORTHO05D007507 1.6e-38 162.9 123 64.2
Ah.01g018430 Amaranthus hybridus HOM05D005996 ORTHO05D007507 6.0e-38 161.0 123 64.2
COL.COLO4_17237 Corchorus olitorius HOM05D005996 ORTHO05D007507 6.0e-38 161.0 123 63.4
Rhsim05G0064300 Rhododendron simsii HOM05D005996 ORTHO05D007507 1.0e-37 160.2 122 64.8
PSO170G2255 Papaver somniferum HOM05D005996 ORTHO05D007507 1.3e-37 159.8 123 62.6
Duzib052G0584 Durio zibethinus HOM05D005996 ORTHO05D007507 1.8e-37 159.5 123 63.4
Lj3g0021328 Lotus japonicus HOM05D005996 ORTHO05D007507 1.8e-37 159.5 125 64.8
PSO700G0013 Papaver somniferum HOM05D005996 ORTHO05D007507 2.3e-37 159.1 123 61.8
Aqoxy5G01766 Aquilegia oxysepala HOM05D005996 ORTHO05D007507 3.0e-37 158.7 123 62.6
vmacro17393 Vaccinium macrocarpon HOM05D005996 ORTHO05D007507 6.7e-37 157.5 121 65.3
Lalb_Chr01g0001941 Lupinus albus HOM05D005996 ORTHO05D007507 8.7e-37 157.1 123 62.6
Hund06298 Selenicereus undatus HOM05D005996 ORTHO05D007507 2.5e-36 155.6 122 63.1
Duzib248G0011 Durio zibethinus HOM05D005996 ORTHO05D007507 3.3e-36 155.2 123 63.4
THA.LOC104807280 Tarenaya hassleriana HOM05D005996 ORTHO05D007507 1.6e-35 152.9 123 61.0
MBI09_g26149_MAGBIO Magnolia biondii HOM05D005996 ORTHO05D007507 6.2e-35 151.0 111 67.6
AL7G16380 Arabidopsis lyrata HOM05D005996 ORTHO05D007507 9.0e-34 147.1 123 58.5
AT4G34830 Arabidopsis thaliana HOM05D005996 ORTHO05D007507 9.0e-34 147.1 123 58.5
Sp7g32590 Schrenkiella parvula HOM05D005996 ORTHO05D007507 7.6e-33 144.1 123 59.3
Aa31LG2G15710 Aethionema arabicum HOM05D005996 ORTHO05D007507 1.3e-32 143.3 123 56.9
BcaNung00650 Brassica carinata HOM05D005996 ORTHO05D007507 1.3e-32 143.3 123 58.5
BraA01t00353Z Brassica rapa HOM05D005996 ORTHO05D007507 1.3e-32 143.3 123 59.3
Thhalv10024275m.g Eutrema salsugineum HOM05D005996 ORTHO05D007507 1.3e-32 143.3 123 59.3
C01p03970 Brassica napus HOM05D005996 ORTHO05D007507 2.9e-32 142.1 123 57.7
BolC1t00389H Brassica oleracea HOM05D005996 ORTHO05D007507 2.9e-32 142.1 123 57.7
Carub.0007s0547 Capsella rubella HOM05D005996 ORTHO05D007507 3.8e-32 141.7 123 57.7
AUR62016883 Chenopodium quinoa HOM05D005996 ORTHO05D007507 8.4e-32 140.6 108 63.0
HPP92_022112 Vanilla planifolia HOM05D005996 ORTHO05D007507 1.9e-31 139.4 123 54.5
BcaNung04307 Brassica carinata HOM05D005996 ORTHO05D007507 3.2e-31 138.7 123 56.9
arahy.Tifrunner.gnm1.ann1.XDQA6W Arachis hypogaea HOM05D005996 ORTHO05D007507 1.0e-29 133.7 111 58.6
arahy.Tifrunner.gnm1.ann1.YQYF3H Arachis hypogaea HOM05D005996 ORTHO05D007507 1.0e-29 133.7 111 58.6
A01p03690 Brassica napus HOM05D005996 ORTHO05D007507 1.9e-28 129.4 148 49.3
Os10g0181200 Oryza sativa ssp. japonica HOM05D005996 ORTHO05D007507 2.8e-27 125.6 123 51.2
SEGI_22573 Sequoiadendron giganteum HOM05D005996 ORTHO05D007507 6.9e-26 120.9 109 57.8
SMO340G0075 Selaginella moellendorffii HOM05D005996 ORTHO05D007507 7.6e-17 90.9 122 41.8
AagrBONN_evm.TU.Sc2ySwM_228.2051 Anthoceros agrestis HOM05D005996 ORTHO05D007507 1.7e-16 89.7 125 44.8
Pp3c12_14320 Physcomitrium patens HOM05D005996 ORTHO05D007507 5.0e-16 88.2 121 41.3
Mapoly0039s0078 Marchantia polymorpha HOM05D005996 ORTHO05D007507 1.4e-15 86.7 122 41.8
Mapoly0039s0079 Marchantia polymorpha HOM05D005996 ORTHO05D007507 1.2e-14 83.6 121 38.0
Pp3c10_19570 Physcomitrium patens HOM05D005996 ORTHO05D007507 2.3e-13 79.3 126 38.9
SMO240G0032 Selaginella moellendorffii HOM05D005996 ORTHO05D007507 3.9e-13 78.6 110 40.0
CBR_g66762 Chara braunii HOM05D005996 ORTHO05D007507 5.9e-09 64.7 151 33.1
Pp3c7_22430 Physcomitrium patens HOM05D005996 ORTHO05D007507 2.2e-08 62.8 121 31.4


User provided reference genes

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