Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000980g0180 Nicotiana tabacum HOM05D005397 ORTHO05D006493 2.0e-200 702.2 345 100.0
Nitab4.5_0002415g0080 Nicotiana tabacum HOM05D005397 ORTHO05D283191 6.4e-26 122.5 103 61.2
Solyc04g081070.3 Solanum lycopersicum HOM05D005397 ORTHO05D006493 2.0e-19 100.9 108 50.0
Sopen04g034690 Solanum pennellii HOM05D005397 ORTHO05D006493 2.0e-19 100.9 108 50.0
PGSC0003DMG400003765 Solanum tuberosum HOM05D005397 ORTHO05D006493 2.0e-19 100.9 108 50.0
Nitab4.5_0011205g0010 Nicotiana tabacum HOM05D005397 ORTHO05D006493 5.8e-19 99.4 108 49.1
CAN.G851.6 Capsicum annuum HOM05D005397 ORTHO05D006493 7.6e-19 99.0 108 49.1
DCAR_013850 Daucus carota HOM05D005397 ORTHO05D006493 2.2e-18 97.4 108 47.2
Dinv31812 Davidia involucrata HOM05D005397 ORTHO05D006493 5.5e-17 92.8 108 46.3
Oeu046246.1 Olea europaea HOM05D005397 ORTHO05D006493 5.5e-17 92.8 108 45.4
Lj4A791T82 Lonicera japonica HOM05D005397 ORTHO05D006493 7.1e-17 92.4 113 44.2
Cc10_g02070 Coffea canephora HOM05D005397 ORTHO05D006493 3.5e-16 90.1 112 43.8
Migut.C00793 Erythranthe guttata HOM05D005397 ORTHO05D006493 3.5e-16 90.1 108 43.5
SGA_v2.0_scaffold11G05874 Striga asiatica HOM05D005397 ORTHO05D006493 1.3e-15 88.2 108 40.7
Actinidia29797 Actinidia chinensis HOM05D005397 ORTHO05D006493 3.9e-15 86.7 110 40.9
CSS0019191 Camellia sinensis var. sinensis HOM05D005397 ORTHO05D006493 6.7e-15 85.9 109 44.0
GSVIVG01022614001 Vitis vinifera HOM05D005397 ORTHO05D006493 6.7e-15 85.9 108 42.6
TAR625G0278 Trochodendron aralioides HOM05D005397 ORTHO05D006493 1.5e-14 84.7 108 42.6
Hund17223 Selenicereus undatus HOM05D005397 ORTHO05D006493 1.9e-14 84.3 129 36.4
Cpa.g.sc140.23 Carica papaya HOM05D005397 ORTHO05D006493 2.5e-14 84.0 107 40.2
CiPaw.07G153900 Carya illinoinensis HOM05D005397 ORTHO05D006493 2.5e-14 84.0 107 41.1
Cfa013909 Carpinus fangiana HOM05D005397 ORTHO05D006493 3.3e-14 83.6 107 39.3
COL.COLO4_26194 Corchorus olitorius HOM05D005397 ORTHO05D006493 3.3e-14 83.6 107 40.2
Phvul.001G009500 Phaseolus vulgaris HOM05D005397 ORTHO05D006493 3.3e-14 83.6 104 41.3
SalBow7G0110 Salvia bowleyana HOM05D005397 ORTHO05D006493 4.3e-14 83.2 105 40.0
Haze_22588 Corylus avellana HOM05D005397 ORTHO05D006493 5.7e-14 82.8 107 39.3
MSTRG.1224 Avicennia marina HOM05D005397 ORTHO05D006493 7.4e-14 82.4 108 39.8
Duzib093G1874 Durio zibethinus HOM05D005397 ORTHO05D006493 7.4e-14 82.4 107 40.2
QL02p010766 Quercus lobata HOM05D005397 ORTHO05D006493 7.4e-14 82.4 107 39.3
Aqoxy6G02360 Aquilegia oxysepala HOM05D005397 ORTHO05D006493 9.7e-14 82.0 108 40.7
Carub.0008s0657 Capsella rubella HOM05D005397 ORTHO05D006493 9.7e-14 82.0 107 37.4
AT5G42480 Arabidopsis thaliana HOM05D005397 ORTHO05D006493 1.3e-13 81.6 107 37.4
BcaC06g31756 Brassica carinata HOM05D005397 ORTHO05D006493 1.3e-13 81.6 107 36.4
CANSAT78G0864 Cannabis sativa HOM05D005397 ORTHO05D006493 1.3e-13 81.6 107 41.1
CARHR181880 Cardamine hirsuta HOM05D005397 ORTHO05D006493 1.3e-13 81.6 107 37.4
Rhsim07G0244600 Rhododendron simsii HOM05D005397 ORTHO05D006493 1.3e-13 81.6 108 40.7
AL8G18860 Arabidopsis lyrata HOM05D005397 ORTHO05D006493 1.6e-13 81.3 107 37.4
Gorai.009G196600 Gossypium raimondii HOM05D005397 ORTHO05D006493 1.6e-13 81.3 107 39.3
HanXRQChr02g0041801 Helianthus annuus HOM05D005397 ORTHO05D006493 2.2e-13 80.9 129 39.5
PSO675G6273 Papaver somniferum HOM05D005397 ORTHO05D006493 2.2e-13 80.9 108 41.7
Sp2g06890 Schrenkiella parvula HOM05D005397 ORTHO05D006493 2.2e-13 80.9 107 36.4
SpUn0014_0040 Schrenkiella parvula HOM05D005397 ORTHO05D006493 2.2e-13 80.9 107 36.4
SpUn0090_0020 Schrenkiella parvula HOM05D005397 ORTHO05D006493 2.2e-13 80.9 107 36.4
ATR0149G027 Amborella trichopoda HOM05D005397 ORTHO05D006493 3.7e-13 80.1 109 44.0
ClCG08G014500 Citrullus lanatus HOM05D005397 ORTHO05D006493 3.7e-13 80.1 107 41.1
MELO3C010989.2 Cucumis melo HOM05D005397 ORTHO05D006493 3.7e-13 80.1 107 42.1
Gohir.D05G191300 Gossypium hirsutum HOM05D005397 ORTHO05D006493 3.7e-13 80.1 107 38.3
Manes.18G017200 Manihot esculenta HOM05D005397 ORTHO05D006493 3.7e-13 80.1 107 39.3
TWI12G0995 Tripterygium wilfordii HOM05D005397 ORTHO05D006493 3.7e-13 80.1 105 39.0
VMungo0647G1731 Vigna mungo HOM05D005397 ORTHO05D006493 3.7e-13 80.1 104 40.4
Gohir.A05G188200 Gossypium hirsutum HOM05D005397 ORTHO05D006493 4.8e-13 79.7 107 38.3
A06p48310 Brassica napus HOM05D005397 ORTHO05D006493 6.3e-13 79.3 107 37.4
BraA06t27701Z Brassica rapa HOM05D005397 ORTHO05D006493 6.3e-13 79.3 107 37.4
Nn5g29235 Nelumbo nucifera HOM05D005397 ORTHO05D006493 6.3e-13 79.3 107 39.3
vmacro04326 Vaccinium macrocarpon HOM05D005397 ORTHO05D006493 6.3e-13 79.3 108 38.9
Aa31LG9G12600 Aethionema arabicum HOM05D005397 ORTHO05D006493 8.2e-13 79.0 108 38.0
EL10Ac1g00550 Beta vulgaris HOM05D005397 ORTHO05D006493 1.1e-12 78.6 105 40.0
Glyma.14G216700 Glycine max HOM05D005397 ORTHO05D006493 1.1e-12 78.6 104 39.4
THA.LOC104810654 Tarenaya hassleriana HOM05D005397 ORTHO05D006493 1.1e-12 78.6 107 37.4
ECA247G2991 Erigeron canadensis HOM05D005397 ORTHO05D006493 1.4e-12 78.2 108 40.7
Eucgr.F01622 Eucalyptus grandis HOM05D005397 ORTHO05D006493 1.4e-12 78.2 107 43.0
BcaC02g10766 Brassica carinata HOM05D005397 ORTHO05D006493 1.8e-12 77.8 107 35.5
C04p25360 Brassica napus HOM05D005397 ORTHO05D006493 1.8e-12 77.8 107 35.5
BolC4t24042H Brassica oleracea HOM05D005397 ORTHO05D006493 1.8e-12 77.8 107 35.5
Lsat_1_v5_gn_1_16260 Lactuca sativa HOM05D005397 ORTHO05D006493 1.8e-12 77.8 108 42.6
Lj5g0007176 Lotus japonicus HOM05D005397 ORTHO05D006493 1.8e-12 77.8 104 37.5
Thhalv10003151m.g Eutrema salsugineum HOM05D005397 ORTHO05D006493 3.1e-12 77.0 107 34.6
Glyma.17G255300 Glycine max HOM05D005397 ORTHO05D006493 3.1e-12 77.0 104 39.4
PSO541G6090 Papaver somniferum HOM05D005397 ORTHO05D006493 4.1e-12 76.6 108 39.8
Thecc.08G038000 Theobroma cacao HOM05D005397 ORTHO05D006493 4.1e-12 76.6 107 38.3
DCAR_017505 Daucus carota HOM05D005397 ORTHO05D006493 5.3e-12 76.3 108 41.7
Lalb_Chr24g0398791 Lupinus albus HOM05D005397 ORTHO05D006493 5.3e-12 76.3 104 39.4
Sed0023445 Sechium edule HOM05D005397 ORTHO05D006493 5.3e-12 76.3 100 41.0
AUR62014423 Chenopodium quinoa HOM05D005397 ORTHO05D006493 6.9e-12 75.9 105 37.1
Ca_13392_v3 Cicer arietinum L. HOM05D005397 ORTHO05D006493 6.9e-12 75.9 104 38.5
CsaV3_2G029290 Cucumis sativus L. HOM05D005397 ORTHO05D006493 6.9e-12 75.9 107 38.3
AUR62019159 Chenopodium quinoa HOM05D005397 ORTHO05D006493 1.2e-11 75.1 105 37.1
AUR62034574 Chenopodium quinoa HOM05D005397 ORTHO05D006493 1.2e-11 75.1 105 37.1
Lalb_Chr14g0369691 Lupinus albus HOM05D005397 ORTHO05D006493 1.2e-11 75.1 107 39.3
Sabra05G0181200 Salix brachista HOM05D005397 ORTHO05D006493 1.2e-11 75.1 107 37.4
TPR.G40295 Trifolium pratense HOM05D005397 ORTHO05D006493 1.2e-11 75.1 106 38.7
arahy.Tifrunner.gnm1.ann1.FP07R2 Arachis hypogaea HOM05D005397 ORTHO05D006493 1.5e-11 74.7 104 38.5
arahy.Tifrunner.gnm1.ann1.WNU9KC Arachis hypogaea HOM05D005397 ORTHO05D006493 1.5e-11 74.7 104 38.5
Potri.002G027501 Populus trichocarpa HOM05D005397 ORTHO05D006493 1.5e-11 74.7 98 39.8
Medtr1g023310 Medicago truncatula HOM05D005397 ORTHO05D006493 2.0e-11 74.3 106 38.7
Prupe.1G370400 Prunus persica HOM05D005397 ORTHO05D006493 2.6e-11 73.9 101 39.6
PGR083G1852 Punica granatum HOM05D005397 ORTHO05D006493 4.5e-11 73.2 107 39.3
Potri.005G235000 Populus trichocarpa HOM05D005397 ORTHO05D006493 5.9e-11 72.8 107 35.5
Psat6g005320 Pisum sativum HOM05D005397 ORTHO05D006493 1.3e-10 71.6 103 37.9
unitig_26.g9841 Utricularia gibba HOM05D005397 ORTHO05D006493 3.8e-10 70.1 108 35.2
Ciclev10000372m.g Citrus clementina HOM05D005397 ORTHO05D006493 5.5e-09 66.2 104 32.7
HPP92_022425 Vanilla planifolia HOM05D005397 ORTHO05D006493 1.2e-08 65.1 108 33.3
Nitab4.5_0000534g0050 Nicotiana tabacum HOM05D002374 ORTHO05D284804 1.1e-06 58.5 82 40.2
Actinidia37979 Actinidia chinensis HOM05D005397 ORTHO05D006493 3.3e-06 57.0 66 39.4


User provided reference genes

Program Settings