Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000978g0210 Nicotiana tabacum HOM05D000246 ORTHO05D005907 3.7e-191 671.4 339 100.0
Nitab4.5_0006519g0040 Nicotiana tabacum HOM05D000246 ORTHO05D005907 5.5e-187 657.5 339 96.5
Peaxi162Scf00378g00062 Petunia axillaris HOM05D000246 ORTHO05D005907 1.6e-186 656.0 339 96.8
PGSC0003DMG400004583 Solanum tuberosum HOM05D000246 ORTHO05D005907 3.0e-185 651.7 339 95.9
Sopen12g033430 Solanum pennellii HOM05D000246 ORTHO05D005907 9.7e-184 646.7 339 95.9
Nitab4.5_0012487g0010 Nicotiana tabacum HOM05D000246 ORTHO05D005907 1.3e-183 646.4 339 95.0
Sopen09g036210 Solanum pennellii HOM05D000246 ORTHO05D005907 5.3e-182 641.0 339 94.7
Solyc09g098280.3 Solanum lycopersicum HOM05D000246 ORTHO05D005907 1.2e-181 639.8 339 94.4
PGSC0003DMG400021629 Solanum tuberosum HOM05D000246 ORTHO05D005907 1.2e-181 639.8 339 94.4
Cc03_g10680 Coffea canephora HOM05D000246 ORTHO05D005907 2.0e-181 639.0 339 94.1
Dinv22710 Davidia involucrata HOM05D000246 ORTHO05D005907 3.6e-178 628.2 339 92.6
GSVIVG01031659001 Vitis vinifera HOM05D000246 ORTHO05D005907 4.6e-178 627.9 339 92.0
TWI09G0257 Tripterygium wilfordii HOM05D000246 ORTHO05D005907 2.3e-177 625.5 335 92.5
Migut.N00444 Erythranthe guttata HOM05D000246 ORTHO05D005907 6.7e-177 624.0 339 92.0
Lj3C235G1 Lonicera japonica HOM05D000246 ORTHO05D005907 3.3e-176 621.7 334 91.6
Potri.014G147100 Populus trichocarpa HOM05D000246 ORTHO05D005907 7.4e-176 620.5 333 92.2
Aqoxy2G04069 Aquilegia oxysepala HOM05D000246 ORTHO05D005907 9.7e-176 620.2 339 89.4
TWI53G1869 Tripterygium wilfordii HOM05D000246 ORTHO05D005907 9.7e-176 620.2 336 91.1
MSTRG.21977 Avicennia marina HOM05D000246 ORTHO05D005907 1.7e-175 619.4 339 91.2
Hma1.2p1_3184F.1_g333720 Hydrangea macrophylla HOM05D000246 ORTHO05D005907 1.7e-175 619.4 334 92.8
Prupe.1G177100 Prunus persica HOM05D000246 ORTHO05D005907 2.8e-175 618.6 339 91.2
Lsat_1_v5_gn_6_71461 Lactuca sativa HOM05D000246 ORTHO05D005907 1.4e-174 616.3 338 89.3
Gorai.009G351400 Gossypium raimondii HOM05D000246 ORTHO05D005907 1.8e-174 615.9 339 89.4
Gohir.D05G327500 Gossypium hirsutum HOM05D000246 ORTHO05D005907 2.4e-174 615.5 339 89.4
Lsat_1_v5_gn_6_32061 Lactuca sativa HOM05D000246 ORTHO05D005907 2.4e-174 615.5 337 89.0
Haze_11715 Corylus avellana HOM05D000246 ORTHO05D005907 3.1e-174 615.1 339 90.3
Manes.01G119800 Manihot esculenta HOM05D000246 ORTHO05D005907 3.1e-174 615.1 336 90.2
Phvul.008G017300 Phaseolus vulgaris HOM05D000246 ORTHO05D005907 3.1e-174 615.1 339 90.3
Cfa008706 Carpinus fangiana HOM05D000246 ORTHO05D005907 4.1e-174 614.8 339 90.3
Thecc.04G186400 Theobroma cacao HOM05D000246 ORTHO05D005907 4.1e-174 614.8 339 89.4
VMungo1383G1353 Vigna mungo HOM05D000246 ORTHO05D005907 4.1e-174 614.8 339 90.3
EL10Ac3g07395 Beta vulgaris HOM05D000246 ORTHO05D005907 9.1e-174 613.6 340 90.9
Manes.02G078000 Manihot esculenta HOM05D000246 ORTHO05D005907 9.1e-174 613.6 337 89.6
RcHm_v2.0_Chr4g0410381 Rosa chinensis HOM05D000246 ORTHO05D005907 9.1e-174 613.6 338 90.2
Gorai.006G227100 Gossypium raimondii HOM05D000246 ORTHO05D005907 1.5e-173 612.8 339 88.5
Glyma.18G284200 Glycine max HOM05D000246 ORTHO05D005907 2.0e-173 612.5 339 89.7
ClCG07G015740 Citrullus lanatus HOM05D000246 ORTHO05D005907 2.6e-173 612.1 339 89.1
Glyma.02G097300 Glycine max HOM05D000246 ORTHO05D005907 2.6e-173 612.1 333 91.0
arahy.Tifrunner.gnm1.ann1.13067A Arachis hypogaea HOM05D000246 ORTHO05D005907 3.4e-173 611.7 339 88.8
arahy.Tifrunner.gnm1.ann1.N8MPD0 Arachis hypogaea HOM05D000246 ORTHO05D005907 3.4e-173 611.7 339 88.8
arahy.Tifrunner.gnm1.ann1.P7X33L Arachis hypogaea HOM05D000246 ORTHO05D005907 3.4e-173 611.7 339 88.8
CsaV3_4G003350 Cucumis sativus L. HOM05D000246 ORTHO05D005907 3.4e-173 611.7 339 88.8
Gohir.D09G203200 Gossypium hirsutum HOM05D000246 ORTHO05D005907 3.4e-173 611.7 339 88.2
Eucgr.H00462 Eucalyptus grandis HOM05D000246 ORTHO05D005907 4.5e-173 611.3 340 89.4
MBI07_g06132_MAGBIO Magnolia biondii HOM05D000246 ORTHO05D005907 4.5e-173 611.3 339 88.8
Gohir.A09G209800 Gossypium hirsutum HOM05D000246 ORTHO05D005907 5.9e-173 610.9 339 88.2
DCAR_004354 Daucus carota HOM05D000246 ORTHO05D005907 7.7e-173 610.5 339 88.8
CiPaw.01G109200 Carya illinoinensis HOM05D000246 ORTHO05D005907 1.0e-172 610.1 339 89.1
AUR62020934 Chenopodium quinoa HOM05D000246 ORTHO05D005907 1.0e-172 610.1 342 88.6
MD04G1027700 Malus domestica HOM05D000246 ORTHO05D005907 1.0e-172 610.1 339 89.7
Lj1g0023209 Lotus japonicus HOM05D000246 ORTHO05D005907 1.3e-172 609.8 339 89.4
Actinidia35924 Actinidia chinensis HOM05D000246 ORTHO05D005907 2.9e-172 608.6 339 88.8
Nn1g09763 Nelumbo nucifera HOM05D000246 ORTHO05D005907 3.8e-172 608.2 339 88.5
Lalb_Chr25g0284231 Lupinus albus HOM05D000246 ORTHO05D005907 5.0e-172 607.8 339 88.2
Sc19g0007630 Simmondsia chinensis HOM05D000246 ORTHO05D005907 8.5e-172 607.1 333 90.7
CAN.G710.44 Capsicum annuum HOM05D000246 ORTHO05D005907 1.1e-171 606.7 309 96.8
HanXRQChr10g0290061 Helianthus annuus HOM05D000246 ORTHO05D005907 1.1e-171 606.7 337 88.4
Lalb_Chr10g0092081 Lupinus albus HOM05D000246 ORTHO05D005907 1.1e-171 606.7 334 88.9
Sed0019749 Sechium edule HOM05D000246 ORTHO05D005907 4.2e-171 604.7 339 87.9
Ca_07120_v3 Cicer arietinum L. HOM05D000246 ORTHO05D005907 7.2e-171 604.0 338 88.2
Cpa.g.sc53.167 Carica papaya HOM05D000246 ORTHO05D005907 1.2e-170 603.2 339 88.2
PSO675G5278 Papaver somniferum HOM05D000246 ORTHO05D005907 2.1e-170 602.4 333 89.2
Ciclev10005378m.g Citrus clementina HOM05D000246 ORTHO05D005907 4.7e-170 601.3 339 86.7
PSO017G6996 Papaver somniferum HOM05D000246 ORTHO05D005907 4.7e-170 601.3 333 88.9
PGR142G3194 Punica granatum HOM05D000246 ORTHO05D005907 4.7e-170 601.3 336 88.1
CANSAT78G0915 Cannabis sativa HOM05D000246 ORTHO05D005907 6.1e-170 600.9 339 87.9
Psat3g188360 Pisum sativum HOM05D000246 ORTHO05D005907 6.1e-170 600.9 333 88.9
Sed0019335 Sechium edule HOM05D000246 ORTHO05D005907 7.9e-170 600.5 339 87.3
FvH4_4g12310 Fragaria vesca HOM05D000246 ORTHO05D005907 1.4e-169 599.7 340 87.9
FAN12G0598 Fragaria x ananassa HOM05D000246 ORTHO05D005907 1.4e-169 599.7 340 87.9
FAN17G0846 Fragaria x ananassa HOM05D000246 ORTHO05D005907 1.8e-169 599.4 340 87.9
Potri.002G233500 Populus trichocarpa HOM05D000246 ORTHO05D005907 3.0e-169 598.6 342 87.1
unitig_578.g16351 Utricularia gibba HOM05D000246 ORTHO05D005907 5.1e-169 597.8 333 88.6
Hund24461 Selenicereus undatus HOM05D000246 ORTHO05D005907 6.7e-169 597.4 341 88.3
SalBow6G1195 Salvia bowleyana HOM05D000246 ORTHO05D005907 1.1e-168 596.7 381 81.1
CDE05G2302 Ceratophyllum demersum HOM05D000246 ORTHO05D005907 3.3e-168 595.1 339 85.3
FAN07G2572 Fragaria x ananassa HOM05D000246 ORTHO05D005907 5.7e-168 594.3 340 87.1
FAN22G2422 Fragaria x ananassa HOM05D000246 ORTHO05D005907 5.7e-168 594.3 341 87.1
HPP92_006214 Vanilla planifolia HOM05D000246 ORTHO05D005907 7.4e-168 594.0 339 86.1
Medtr7g021870 Medicago truncatula HOM05D000246 ORTHO05D005907 2.2e-167 592.4 331 87.6
Nitab4.5_0001526g0070 Nicotiana tabacum HOM05D000246 ORTHO05D005907 2.2e-167 592.4 339 88.8
Lj3C238T3 Lonicera japonica HOM05D000246 ORTHO05D005907 6.3e-167 590.9 320 90.6
SGA_v2.0_scaffold178G39529 Striga asiatica HOM05D000246 ORTHO05D005907 5.3e-166 587.8 309 93.2
Sp1g09540 Schrenkiella parvula HOM05D000246 ORTHO05D005907 6.9e-166 587.4 333 85.3
A06p07620 Brassica napus HOM05D000246 ORTHO05D005907 1.2e-165 586.6 337 84.0
BraA09t41822Z Brassica rapa HOM05D000246 ORTHO05D005907 1.2e-165 586.6 335 84.5
Sabra14G0110400 Salix brachista HOM05D000246 ORTHO05D005907 1.2e-165 586.6 330 88.8
Aa31LG1G4010 Aethionema arabicum HOM05D000246 ORTHO05D005907 2.6e-165 585.5 333 85.0
BolC8t52387H Brassica oleracea HOM05D000246 ORTHO05D005907 2.6e-165 585.5 335 84.2
BraA08t35292Z Brassica rapa HOM05D000246 ORTHO05D005907 2.6e-165 585.5 335 84.5
Rhsim09G0037600 Rhododendron simsii HOM05D000246 ORTHO05D005907 2.6e-165 585.5 353 84.1
Thhalv10008134m.g Eutrema salsugineum HOM05D000246 ORTHO05D005907 4.5e-165 584.7 333 84.7
A08p33760 Brassica napus HOM05D000246 ORTHO05D005907 5.9e-165 584.3 333 84.4
C08p48480 Brassica napus HOM05D000246 ORTHO05D005907 5.9e-165 584.3 338 83.4
BraA06t23964Z Brassica rapa HOM05D000246 ORTHO05D005907 5.9e-165 584.3 335 84.2
AT1G10840 Arabidopsis thaliana HOM05D000246 ORTHO05D005907 1.3e-164 583.2 333 84.7
BcaC07g38630 Brassica carinata HOM05D000246 ORTHO05D005396 1.7e-164 582.8 333 84.1
Carub.0001s1038 Capsella rubella HOM05D000246 ORTHO05D005907 2.2e-164 582.4 333 84.4
DCAR_001263 Daucus carota HOM05D000246 ORTHO05D005907 2.2e-164 582.4 331 88.2
AL1G21780 Arabidopsis lyrata HOM05D000246 ORTHO05D005907 2.9e-164 582.0 333 84.4
BcaC05g24965 Brassica carinata HOM05D000246 ORTHO05D005907 2.9e-164 582.0 333 84.1
C05p09210 Brassica napus HOM05D000246 ORTHO05D005907 8.5e-164 580.5 333 84.1
BolC8t49032H Brassica oleracea HOM05D000246 ORTHO05D005907 1.1e-163 580.1 337 83.1
CDE05G0298 Ceratophyllum demersum HOM05D000246 ORTHO05D005907 2.5e-163 578.9 339 83.5
THA.LOC104819306 Tarenaya hassleriana HOM05D000246 ORTHO05D005907 4.2e-163 578.2 333 84.7
BcaC07g38591 Brassica carinata HOM05D000246 ORTHO05D005907 9.4e-163 577.0 333 83.5
BcaNung06200 Brassica carinata HOM05D000246 ORTHO05D005907 2.1e-162 575.9 326 84.7
A09p64720 Brassica napus HOM05D000246 ORTHO05D005907 2.7e-162 575.5 350 80.6
QL06p027657 Quercus lobata HOM05D000246 ORTHO05D005907 2.7e-162 575.5 314 90.8
Dinv44209 Davidia involucrata HOM05D000246 ORTHO05D005907 4.7e-162 574.7 339 86.1
THA.LOC104809592 Tarenaya hassleriana HOM05D000246 ORTHO05D005907 4.7e-162 574.7 333 84.1
CARHR011060 Cardamine hirsuta HOM05D000246 ORTHO05D005907 6.1e-162 574.3 333 83.5
Atru.chr3.1829 Acer truncatum HOM05D000246 ORTHO05D005907 1.1e-160 570.1 320 88.1
FAN12G1501 Fragaria x ananassa HOM05D000246 ORTHO05D005907 2.8e-159 565.5 321 87.5
ATR1147G030 Amborella trichopoda HOM05D000246 ORTHO05D005907 9.1e-158 560.5 320 85.9
Os04g0376500 Oryza sativa ssp. japonica HOM05D000246 ORTHO05D005907 1.2e-157 560.1 334 81.4
Zm00001eb420800 Zea mays HOM05D000246 ORTHO05D005907 4.5e-157 558.1 343 80.2
SMO201G0006 Selaginella moellendorffii HOM05D000246 ORTHO05D005907 6.5e-156 554.3 335 80.3
Oeu034474.1 Olea europaea HOM05D000246 ORTHO05D005907 2.1e-154 549.3 376 78.2
BolC5t29661H Brassica oleracea HOM05D000246 ORTHO05D005907 2.7e-154 548.9 316 83.5
Duzib268G0303 Durio zibethinus HOM05D000246 ORTHO05D005907 2.7e-154 548.9 339 82.3
Mapoly0149s0014 Marchantia polymorpha HOM05D000246 ORTHO05D005907 1.2e-152 543.5 333 78.1
SEGI_02915 Sequoiadendron giganteum HOM05D000246 ORTHO05D005907 9.7e-152 540.4 345 77.4
Pp3c6_17230 Physcomitrium patens HOM05D000246 ORTHO05D005907 3.1e-150 535.4 335 77.6
Pp3c25_2440 Physcomitrium patens HOM05D000246 ORTHO05D005907 1.6e-149 533.1 335 77.0
vmacro00560 Vaccinium macrocarpon HOM05D000246 ORTHO05D005907 4.5e-149 531.6 421 68.2
C08p13990 Brassica napus HOM05D000246 ORTHO05D005907 1.2e-146 523.5 363 73.6
CSS0028322 Camellia sinensis var. sinensis HOM05D000246 ORTHO05D005907 2.3e-140 502.7 271 90.4
Nn7g38282 Nelumbo nucifera HOM05D000246 ORTHO05D005907 1.9e-139 499.6 339 77.6
TPR.G2903 Trifolium pratense HOM05D000246 ORTHO05D005907 9.5e-139 497.3 289 84.4
TAR365G1195 Trochodendron aralioides HOM05D000246 ORTHO05D005907 2.0e-136 489.6 263 92.4
Hma1.2p1_1025F.1_g249250 Hydrangea macrophylla HOM05D000246 ORTHO05D005907 5.7e-136 488.0 266 91.7
Hma1.2p1_3184F.1_g333715 Hydrangea macrophylla HOM05D000246 ORTHO05D005907 5.7e-136 488.0 266 91.7
CBR_g23450 Chara braunii HOM05D000246 ORTHO05D005907 3.7e-135 485.3 316 73.4
Duzib151G0358 Durio zibethinus HOM05D000246 ORTHO05D005907 4.3e-131 471.9 339 73.7
COL.COLO4_08082 Corchorus olitorius HOM05D000246 ORTHO05D005907 1.0e-129 467.2 339 72.3
Ciclev10033395m.g Citrus clementina HOM05D000246 ORTHO05D005907 2.1e-122 443.0 341 66.9
ECA238G0367 Erigeron canadensis HOM05D000246 ORTHO05D005907 1.5e-120 436.8 238 88.2
Zm00001eb420740 Zea mays HOM05D000246 ORTHO05D005907 2.2e-119 433.0 251 83.3
PRCOL_00002009 Prasinoderma coloniale HOM05D000246 ORTHO05D005907 2.3e-116 422.9 329 61.7
AUR62018486 Chenopodium quinoa HOM05D000246 ORTHO05D005907 2.5e-115 419.5 251 82.9
MELO3C017707.2 Cucumis melo HOM05D000246 ORTHO05D005907 4.6e-109 398.7 216 88.9
AagrBONN_evm.TU.Sc2ySwM_344.209 Anthoceros agrestis HOM05D000246 ORTHO05D005907 6.6e-108 394.8 249 77.9
Cre16.g676314 Chlamydomonas reinhardtii HOM05D000246 ORTHO05D005907 2.8e-106 389.4 328 58.8
MCO05G711 Micromonas commoda HOM05D000246 ORTHO05D005907 2.7e-101 372.9 321 59.5
SHI25257 Sapria himalayana HOM05D000246 ORTHO05D005907 7.9e-53 211.8 128 81.2
Pp3c25_2670 Physcomitrium patens HOM05D000246 ORTHO05D005907 4.4e-43 179.5 169 59.8
Actinidia32962 Actinidia chinensis HOM05D000246 ORTHO05D052905 9.7e-35 151.8 180 53.3
PSO675G6425 Papaver somniferum HOM05D000246 ORTHO05D005907 1.9e-30 137.5 79 82.3
Dinv10886 Davidia involucrata HOM05D000246 ORTHO05D005907 3.0e-28 130.2 74 82.4
Dinv10847 Davidia involucrata HOM05D000246 ORTHO05D005907 2.2e-26 124.0 73 80.8
AagrBONN_evm.TU.Sc2ySwM_362.466 Anthoceros agrestis HOM05D000246 ORTHO05D075151 2.8e-26 123.6 74 81.1
COL.COLO4_30406 Corchorus olitorius HOM05D000246 ORTHO05D005907 2.3e-20 104.0 110 55.5
FAN20G1849 Fragaria x ananassa HOM05D000246 ORTHO05D209582 2.0e-16 90.9 51 86.3
Medtr7g064210 Medicago truncatula HOM05D000076 ORTHO05D036729 4.0e-12 76.6 99 45.5
VMungo0331G1529 Vigna mungo HOM05D000246 ORTHO05D436255 6.8e-12 75.9 42 83.3
Medtr2g022940 Medicago truncatula HOM05D000871 ORTHO05D036729 2.2e-10 70.9 57 64.9
AagrBONN_evm.TU.Sc2ySwM_362.465 Anthoceros agrestis HOM05D000246 ORTHO05D076687 6.4e-10 69.3 118 37.3
HanXRQChr07g0191211 Helianthus annuus HOM05D000246 ORTHO05D224049 1.9e-09 67.8 60 60.0
HanXRQChr10g0296701 Helianthus annuus HOM05D000246 ORTHO05D221073 1.9e-09 67.8 60 60.0
MELO3C032112.2 Cucumis melo HOM05D000002 ORTHO05D000001 7.3e-06 55.8 125 35.2


User provided reference genes

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