Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000978g0060 Nicotiana tabacum HOM05D005773 ORTHO05D006930 3.2e-221 771.5 421 100.0
Nitab4.5_0012375g0020 Nicotiana tabacum HOM05D005773 ORTHO05D006930 4.5e-199 698.0 425 92.7
Peaxi162Scf00323g00817 Petunia axillaris HOM05D005773 ORTHO05D006930 4.5e-122 442.2 438 66.0
Sopen12g033600 Solanum pennellii HOM05D005773 ORTHO05D006930 1.2e-119 434.1 437 64.5
Solyc12g098850.2 Solanum lycopersicum HOM05D005773 ORTHO05D006930 1.8e-118 430.3 437 64.3
PGSC0003DMG400004596 Solanum tuberosum HOM05D005773 ORTHO05D006930 4.8e-116 422.2 436 62.2
CAN.G484.97 Capsicum annuum HOM05D005773 ORTHO05D006930 5.5e-104 382.1 431 60.1
Oeu012285.1 Olea europaea HOM05D005773 ORTHO05D006930 2.7e-58 230.3 423 42.1
MSTRG.14719 Avicennia marina HOM05D005773 ORTHO05D006930 7.8e-50 202.2 399 40.4
Actinidia18514 Actinidia chinensis HOM05D005773 ORTHO05D006930 3.3e-48 196.8 376 43.6
MSTRG.13210 Avicennia marina HOM05D005773 ORTHO05D006930 7.3e-48 195.7 435 38.6
MD13G1156700 Malus domestica HOM05D005773 ORTHO05D006930 7.3e-48 195.7 417 41.7
QL06p014502 Quercus lobata HOM05D005773 ORTHO05D006930 1.4e-46 191.4 430 39.1
SalBow7G4520 Salvia bowleyana HOM05D005773 ORTHO05D006930 1.8e-46 191.0 415 39.8
Migut.H01460 Erythranthe guttata HOM05D005773 ORTHO05D006930 6.8e-46 189.1 369 40.4
Aqoxy2G02493 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 9.9e-45 185.3 421 38.0
SalBow7G0248 Salvia bowleyana HOM05D005773 ORTHO05D006930 9.9e-45 185.3 415 39.0
Dinv24720 Davidia involucrata HOM05D005773 ORTHO05D006930 2.4e-43 180.6 419 37.2
GSVIVG01017699001 Vitis vinifera HOM05D005773 ORTHO05D006930 1.6e-42 177.9 372 36.8
RcHm_v2.0_Chr4g0427881 Rosa chinensis HOM05D005773 ORTHO05D006930 1.7e-41 174.5 420 38.6
CSS0030034 Camellia sinensis var. sinensis HOM05D005773 ORTHO05D006930 2.3e-41 174.1 314 42.0
Rhsim04G0249100 Rhododendron simsii HOM05D005773 ORTHO05D006930 1.1e-40 171.8 440 37.0
MBI19_g30285_MAGBIO Magnolia biondii HOM05D005773 ORTHO05D006930 2.5e-40 170.6 432 36.3
Sc25g0002150 Simmondsia chinensis HOM05D005773 ORTHO05D006930 1.8e-38 164.5 367 37.6
TAR633G1051 Trochodendron aralioides HOM05D005773 ORTHO05D006930 5.3e-38 162.9 422 35.1
Haze_00756 Corylus avellana HOM05D005773 ORTHO05D006930 2.0e-37 161.0 429 33.8
SGA_v2.0_scaffold109G31080 Striga asiatica HOM05D005773 ORTHO05D006930 7.6e-37 159.1 396 34.1
Manes.03G212700 Manihot esculenta HOM05D005773 ORTHO05D006930 1.3e-36 158.3 405 35.6
Gohir.D11G109200 Gossypium hirsutum HOM05D005773 ORTHO05D006930 2.2e-36 157.5 412 35.0
Gorai.007G116800 Gossypium raimondii HOM05D005773 ORTHO05D006930 2.2e-36 157.5 412 35.0
Thecc.01G324900 Theobroma cacao HOM05D005773 ORTHO05D006930 2.2e-36 157.5 424 33.7
Cc03_g00040 Coffea canephora HOM05D005773 ORTHO05D006930 5.4e-35 152.9 324 37.7
Prupe.1G103600 Prunus persica HOM05D005773 ORTHO05D006930 7.1e-35 152.5 427 37.0
Duzib133G1161 Durio zibethinus HOM05D005773 ORTHO05D006930 1.2e-34 151.8 365 37.5
HanXRQChr05g0148961 Helianthus annuus HOM05D005773 ORTHO05D006930 2.7e-34 150.6 413 36.1
Potri.010G003200 Populus trichocarpa HOM05D005773 ORTHO05D006930 2.3e-33 147.5 363 36.6
THA.LOC104802618 Tarenaya hassleriana HOM05D005773 ORTHO05D006930 2.3e-33 147.5 423 34.5
Lsat_1_v5_gn_6_118320 Lactuca sativa HOM05D005773 ORTHO05D006930 3.0e-33 147.1 415 35.9
MD16G1134300 Malus domestica HOM05D005773 ORTHO05D006930 3.9e-33 146.7 415 36.6
Hund12260 Selenicereus undatus HOM05D005773 ORTHO05D006930 1.5e-32 144.8 378 31.7
Gohir.A11G104400 Gossypium hirsutum HOM05D005773 ORTHO05D006930 7.3e-32 142.5 412 33.3
FvH4_4g21650 Fragaria vesca HOM05D005773 ORTHO05D006930 2.1e-31 141.0 423 33.3
FAN17G1594 Fragaria x ananassa HOM05D005773 ORTHO05D006930 2.1e-31 141.0 423 34.3
BcaB04g17451 Brassica carinata HOM05D005773 ORTHO05D006930 3.6e-31 140.2 412 30.1
Nn3g21943 Nelumbo nucifera HOM05D005773 ORTHO05D006930 3.6e-31 140.2 437 33.2
FAN07G0153 Fragaria x ananassa HOM05D005773 ORTHO05D006930 4.8e-31 139.8 423 34.0
Nn3g21941 Nelumbo nucifera HOM05D005773 ORTHO05D006930 4.8e-31 139.8 424 33.7
Sabra10G0002700 Salix brachista HOM05D005773 ORTHO05D006930 4.8e-31 139.8 418 34.7
CiPaw.01G128000 Carya illinoinensis HOM05D005773 ORTHO05D006930 6.2e-31 139.4 299 35.8
CANSAT78G1256 Cannabis sativa HOM05D005773 ORTHO05D006930 1.1e-30 138.7 425 33.6
Duzib138G1928 Durio zibethinus HOM05D005773 ORTHO05D006930 1.1e-30 138.7 371 34.0
unitig_26.g9353 Utricularia gibba HOM05D005773 ORTHO05D006930 2.4e-30 137.5 396 31.1
PSO210G3229 Papaver somniferum HOM05D005773 ORTHO05D006930 5.3e-30 136.3 373 33.2
TWI53G0973 Tripterygium wilfordii HOM05D005773 ORTHO05D006930 5.3e-30 136.3 354 37.0
CDE09G0185 Ceratophyllum demersum HOM05D005773 ORTHO05D006930 1.5e-29 134.8 406 33.5
Potri.002G187300 Populus trichocarpa HOM05D005773 ORTHO05D006930 2.6e-29 134.0 361 34.1
A08p04910 Brassica napus HOM05D005773 ORTHO05D006930 3.4e-29 133.7 412 30.8
BraA08t32517Z Brassica rapa HOM05D005773 ORTHO05D006930 3.4e-29 133.7 412 30.8
C08p05240 Brassica napus HOM05D005773 ORTHO05D006930 1.3e-28 131.7 414 30.2
Manes.01G234700 Manihot esculenta HOM05D005773 ORTHO05D006930 1.3e-28 131.7 402 34.1
CDE02G3050 Ceratophyllum demersum HOM05D005773 ORTHO05D006930 2.9e-28 130.6 406 32.8
AUR62002540 Chenopodium quinoa HOM05D005773 ORTHO05D006930 3.8e-28 130.2 368 35.9
Nn4g25353 Nelumbo nucifera HOM05D005773 ORTHO05D006930 3.8e-28 130.2 426 31.2
BolC8t47338H Brassica oleracea HOM05D005773 ORTHO05D006930 4.9e-28 129.8 412 30.1
Lalb_Chr13g0299011 Lupinus albus HOM05D005773 ORTHO05D006930 8.4e-28 129.0 362 35.4
Hma1.2p1_1449F.1_g284070 Hydrangea macrophylla HOM05D005773 ORTHO05D006930 1.4e-27 128.3 351 35.6
Ciclev10020833m.g Citrus clementina HOM05D005773 ORTHO05D006930 1.9e-27 127.9 379 34.6
COL.COLO4_23133 Corchorus olitorius HOM05D005773 ORTHO05D006930 4.2e-27 126.7 355 32.1
Sp1g35250 Schrenkiella parvula HOM05D005773 ORTHO05D006930 9.3e-27 125.6 416 31.5
EL10Ac3g06235 Beta vulgaris HOM05D005773 ORTHO05D006930 1.2e-26 125.2 355 33.0
AT1G48300 Arabidopsis thaliana HOM05D005773 ORTHO05D006930 1.6e-26 124.8 411 33.1
Thhalv10011577m.g Eutrema salsugineum HOM05D005773 ORTHO05D006930 1.6e-26 124.8 414 31.4
Medtr4g124080 Medicago truncatula HOM05D005773 ORTHO05D006930 2.1e-26 124.4 374 32.4
Aa31LG10G5470 Aethionema arabicum HOM05D005773 ORTHO05D006930 4.6e-26 123.2 424 33.3
ECA246G2714 Erigeron canadensis HOM05D005773 ORTHO05D006930 4.6e-26 123.2 354 35.0
PGR004G1534 Punica granatum HOM05D005773 ORTHO05D006930 7.9e-26 122.5 356 35.4
Atru.chr5.865 Acer truncatum HOM05D005773 ORTHO05D006930 1.3e-25 121.7 291 35.1
ATR0796G282 Amborella trichopoda HOM05D005773 ORTHO05D006930 1.3e-25 121.7 366 33.3
TPR.G12556 Trifolium pratense HOM05D005773 ORTHO05D006930 1.8e-25 121.3 428 31.5
Aqoxy2G02494 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 3.9e-25 120.2 385 34.3
Ciclev10005574m.g Citrus clementina HOM05D005773 ORTHO05D006930 3.9e-25 120.2 346 33.2
Actinidia01071 Actinidia chinensis HOM05D005773 ORTHO05D006930 1.1e-24 118.6 360 33.1
AL1G54900 Arabidopsis lyrata HOM05D005773 ORTHO05D006930 1.5e-24 118.2 416 31.7
CARHR037910 Cardamine hirsuta HOM05D005773 ORTHO05D006930 1.5e-24 118.2 413 30.3
Ah.07g203560 Amaranthus hybridus HOM05D005773 ORTHO05D006930 1.9e-24 117.9 359 33.7
Psat0s1206g0160 Pisum sativum HOM05D005773 ORTHO05D006930 4.3e-24 116.7 415 30.6
BcaC07g37153 Brassica carinata HOM05D005773 ORTHO05D006930 5.6e-24 116.3 373 30.6
Carub.0001s3743 Capsella rubella HOM05D005773 ORTHO05D006930 9.6e-24 115.5 417 31.9
Lj4g0014107 Lotus japonicus HOM05D005773 ORTHO05D006930 2.1e-23 114.4 422 32.5
VMungo1215G1523 Vigna mungo HOM05D005773 ORTHO05D006930 8.1e-23 112.5 161 44.1
Cpa.g.sc146.13 Carica papaya HOM05D005773 ORTHO05D006930 1.2e-21 108.6 354 29.4
Ca_21368_v3 Cicer arietinum L. HOM05D005773 ORTHO05D006930 2.0e-21 107.8 410 32.0
Sed0002380 Sechium edule HOM05D005773 ORTHO05D006930 1.4e-19 101.7 420 30.0
Eucgr.H04131 Eucalyptus grandis HOM05D005773 ORTHO05D006930 1.9e-19 101.3 419 31.3
Glyma.17G041600 Glycine max HOM05D005773 ORTHO05D006930 1.9e-19 101.3 118 49.2
Cfa015740 Carpinus fangiana HOM05D005773 ORTHO05D006930 2.5e-19 100.9 290 34.5
Phvul.003G123000 Phaseolus vulgaris HOM05D005773 ORTHO05D006930 4.2e-19 100.1 114 52.6
Glyma.13G118300 Glycine max HOM05D005773 ORTHO05D006930 5.5e-19 99.8 118 49.2
AUR62023652 Chenopodium quinoa HOM05D005773 ORTHO05D006930 1.2e-18 98.6 364 30.5
Sed0009476 Sechium edule HOM05D005773 ORTHO05D006930 6.0e-18 96.3 111 45.9
HPP92_012765 Vanilla planifolia HOM05D005773 ORTHO05D006930 7.9e-18 95.9 353 32.0
MELO3C006755.2 Cucumis melo HOM05D005773 ORTHO05D006930 5.1e-17 93.2 104 47.1
arahy.Tifrunner.gnm1.ann1.YBC12K Arachis hypogaea HOM05D005773 ORTHO05D006930 6.7e-17 92.8 362 32.0
Zm00001eb417470 Zea mays HOM05D005773 ORTHO05D006930 6.7e-17 92.8 101 49.5
Atru.chr4.3177 Acer truncatum HOM05D005773 ORTHO05D006930 8.7e-17 92.4 251 33.1
arahy.Tifrunner.gnm1.ann1.F7JGYB Arachis hypogaea HOM05D005773 ORTHO05D006930 1.1e-16 92.0 135 45.9
ClCG05G006890 Citrullus lanatus HOM05D005773 ORTHO05D006930 1.1e-16 92.0 111 45.0
arahy.Tifrunner.gnm1.ann1.RWG9MN Arachis hypogaea HOM05D005773 ORTHO05D006930 1.5e-16 91.7 364 33.0
CsaV3_3G015560 Cucumis sativus L. HOM05D005773 ORTHO05D006930 1.5e-16 91.7 106 46.2
Os05g0137300 Oryza sativa ssp. japonica HOM05D005773 ORTHO05D006930 4.3e-16 90.1 425 24.2
arahy.Tifrunner.gnm1.ann1.AWA2M3 Arachis hypogaea HOM05D000254 ORTHO05D000165 1.6e-15 88.2 130 46.2
arahy.Tifrunner.gnm1.ann1.9W2SDJ Arachis hypogaea HOM05D005773 ORTHO05D006930 3.7e-15 87.0 420 31.4
FAN07G1029 Fragaria x ananassa HOM05D005773 ORTHO05D006930 1.9e-11 74.7 167 38.9
arahy.Tifrunner.gnm1.ann1.EN1MLR Arachis hypogaea HOM05D005773 ORTHO05D006930 7.9e-10 69.3 337 29.1
Aqoxy1G04021 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 2.5e-08 64.3 77 50.6
SEGI_38196 Sequoiadendron giganteum HOM05D005773 ORTHO05D006930 2.5e-08 64.3 108 34.3
Aqoxy1G03305 Aquilegia oxysepala HOM05D006996 ORTHO05D008961 1.3e-07 62.0 158 39.2
CARHR041400 Cardamine hirsuta HOM05D005773 ORTHO05D006930 1.6e-07 61.6 48 54.2
TAR625G0572 Trochodendron aralioides HOM05D005773 ORTHO05D006930 2.2e-07 61.2 85 43.5
Cpa.g.sc57.12 Carica papaya HOM05D005773 ORTHO05D006930 4.8e-07 60.1 45 57.8
Atru.chr9.2474 Acer truncatum HOM05D000366 ORTHO05D001950 8.2e-07 59.3 72 44.4
SEGI_24223 Sequoiadendron giganteum HOM05D005773 ORTHO05D006930 8.2e-07 59.3 58 48.3
Aqoxy7G02275 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 1.8e-06 58.2 138 41.3
Hma1.2p1_1067F.1_g253800 Hydrangea macrophylla HOM05D005773 ORTHO05D006930 1.8e-06 58.2 448 24.8
Pp3c14_16980 Physcomitrium patens HOM05D029403 ORTHO05D006930 5.3e-06 56.6 76 42.1


User provided reference genes

Program Settings