Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000976g0180 Nicotiana tabacum HOM05D005248 ORTHO05D006409 1.3e-102 376.3 185 100.0
CAN.G1008.49 Capsicum annuum HOM05D005248 ORTHO05D006409 3.5e-95 351.7 185 93.5
Sopen03g037010 Solanum pennellii HOM05D005248 ORTHO05D006409 1.2e-92 343.2 185 91.4
PGSC0003DMG400014171 Solanum tuberosum HOM05D005248 ORTHO05D006409 1.6e-92 342.8 185 90.8
Peaxi162Scf00314g00750 Petunia axillaris HOM05D005248 ORTHO05D006409 2.0e-82 309.3 183 83.6
Nitab4.5_0010893g0020 Nicotiana tabacum HOM05D005248 ORTHO05D006409 4.6e-79 298.1 159 94.3
Cc04_g05750 Coffea canephora HOM05D005248 ORTHO05D006409 3.9e-78 295.0 185 75.1
Dinv13708 Davidia involucrata HOM05D005248 ORTHO05D006409 2.9e-73 278.9 188 75.0
Hma1.2p1_0452F.1_g155900 Hydrangea macrophylla HOM05D005248 ORTHO05D006409 1.2e-71 273.5 188 71.3
Oeu017204.1 Olea europaea HOM05D005248 ORTHO05D006409 1.6e-71 273.1 185 70.8
Oeu051184.1 Olea europaea HOM05D005248 ORTHO05D006409 2.1e-71 272.7 185 71.9
MSTRG.22815 Avicennia marina HOM05D005248 ORTHO05D006409 5.1e-70 268.1 185 69.2
CSS0031400 Camellia sinensis var. sinensis HOM05D005248 ORTHO05D006409 1.5e-69 266.5 188 71.8
Lj5A86T66 Lonicera japonica HOM05D005248 ORTHO05D006409 2.5e-69 265.8 190 70.5
SalBow1G4990 Salvia bowleyana HOM05D005248 ORTHO05D006409 5.6e-69 264.6 185 68.1
SGA_v2.0_scaffold37G14670 Striga asiatica HOM05D005248 ORTHO05D006409 2.1e-68 262.7 185 68.6
COL.COLO4_37271 Corchorus olitorius HOM05D005248 ORTHO05D006409 6.2e-68 261.2 186 71.0
Actinidia25510 Actinidia chinensis HOM05D005248 ORTHO05D006409 8.1e-68 260.8 188 68.6
Rhsim08G0198900 Rhododendron simsii HOM05D005248 ORTHO05D006409 8.1e-68 260.8 188 70.7
CSS0027803 Camellia sinensis var. sinensis HOM05D005248 ORTHO05D006409 9.0e-67 257.3 185 70.8
Thecc.03G142000 Theobroma cacao HOM05D005248 ORTHO05D006409 4.5e-66 255.0 188 69.7
SGA_v2.0_scaffold44G16640 Striga asiatica HOM05D005248 ORTHO05D006409 7.6e-66 254.2 182 68.1
GSVIVG01005682001 Vitis vinifera HOM05D005248 ORTHO05D006409 3.8e-65 251.9 189 68.8
Duzib205G1954 Durio zibethinus HOM05D005248 ORTHO05D006409 1.1e-64 250.4 186 67.7
Lsat_1_v5_gn_1_30140 Lactuca sativa HOM05D005248 ORTHO05D006409 1.1e-64 250.4 189 64.6
Potri.015G108300 Populus trichocarpa HOM05D005248 ORTHO05D006409 1.1e-64 250.4 188 66.5
DCAR_025638 Daucus carota HOM05D005248 ORTHO05D006409 4.2e-64 248.4 193 63.2
Nitab4.5_0012624g0030 Nicotiana tabacum HOM05D005248 ORTHO05D006409 4.2e-64 248.4 150 79.3
Gohir.A07G046300 Gossypium hirsutum HOM05D005248 ORTHO05D006409 9.3e-64 247.3 186 67.7
Gohir.D07G050600 Gossypium hirsutum HOM05D005248 ORTHO05D006409 1.2e-63 246.9 186 67.2
QL10p000295 Quercus lobata HOM05D005248 ORTHO05D006409 2.7e-63 245.7 184 65.8
Cfa018696 Carpinus fangiana HOM05D005248 ORTHO05D006409 3.5e-63 245.4 190 65.8
TAR371G0926 Trochodendron aralioides HOM05D005248 ORTHO05D006409 4.6e-63 245.0 187 64.7
Gorai.001G053700 Gossypium raimondii HOM05D005248 ORTHO05D006409 6.0e-63 244.6 186 67.2
PSO063G1686 Papaver somniferum HOM05D005248 ORTHO05D006409 1.0e-62 243.8 196 63.8
TWI39G0330 Tripterygium wilfordii HOM05D005248 ORTHO05D006409 3.0e-62 242.3 186 64.0
HanXRQChr02g0034361 Helianthus annuus HOM05D005248 ORTHO05D006409 3.9e-62 241.9 191 62.8
PSO782G4423 Papaver somniferum HOM05D005248 ORTHO05D006409 3.9e-62 241.9 196 63.3
ECA247G0315 Erigeron canadensis HOM05D005248 ORTHO05D000263 6.7e-62 241.1 173 65.9
THA.LOC104825042 Tarenaya hassleriana HOM05D005248 ORTHO05D006409 1.5e-61 240.0 186 65.1
Migut.I00662 Erythranthe guttata HOM05D005248 ORTHO05D006409 2.5e-61 239.2 185 65.4
Manes.14G043700 Manihot esculenta HOM05D005248 ORTHO05D006409 2.5e-61 239.2 190 64.7
RcHm_v2.0_Chr7g0188501 Rosa chinensis HOM05D005248 ORTHO05D006409 2.5e-61 239.2 187 66.8
Sabra12G0080100 Salix brachista HOM05D005248 ORTHO05D006409 2.5e-61 239.2 188 64.4
FAN08G1048 Fragaria x ananassa HOM05D005248 ORTHO05D006409 3.3e-61 238.8 187 67.4
Cpa.g.sc13.186 Carica papaya HOM05D005248 ORTHO05D006409 4.3e-61 238.4 190 62.6
Phvul.009G158800 Phaseolus vulgaris HOM05D005248 ORTHO05D006409 4.3e-61 238.4 187 62.0
FAN13G2612 Fragaria x ananassa HOM05D005248 ORTHO05D006409 5.6e-61 238.0 187 67.4
CANSAT78G1265 Cannabis sativa HOM05D005248 ORTHO05D006409 9.6e-61 237.3 198 61.6
vmacro19110 Vaccinium macrocarpon HOM05D005248 ORTHO05D006409 9.6e-61 237.3 185 64.3
Sed0027310 Sechium edule HOM05D005248 ORTHO05D006409 1.3e-60 236.9 193 62.7
FvH4_5g09730 Fragaria vesca HOM05D005248 ORTHO05D006409 1.6e-60 236.5 187 66.8
Prupe.5G140100 Prunus persica HOM05D005248 ORTHO05D006409 1.6e-60 236.5 185 65.9
Ciclev10032866m.g Citrus clementina HOM05D005248 ORTHO05D006409 2.1e-60 236.1 188 64.4
FAN04G2277 Fragaria x ananassa HOM05D005248 ORTHO05D006409 3.7e-60 235.3 187 66.8
FAN18G0065 Fragaria x ananassa HOM05D005248 ORTHO05D006409 3.7e-60 235.3 187 66.8
Atru.chr6.1938 Acer truncatum HOM05D005248 ORTHO05D006409 8.1e-60 234.2 225 56.9
AT5G51040 Arabidopsis thaliana HOM05D005248 ORTHO05D006409 1.1e-59 233.8 144 75.0
Glyma.04G202600 Glycine max HOM05D005248 ORTHO05D006409 1.1e-59 233.8 185 61.6
Aqoxy5G00839 Aquilegia oxysepala HOM05D005248 ORTHO05D006409 1.8e-59 233.0 186 63.4
arahy.Tifrunner.gnm1.ann1.1UQX8S Arachis hypogaea HOM05D005248 ORTHO05D006409 2.4e-59 232.6 185 62.7
CsaV3_2G009360 Cucumis sativus L. HOM05D005248 ORTHO05D006409 3.1e-59 232.3 180 62.8
AL8G25260 Arabidopsis lyrata HOM05D005248 ORTHO05D006409 4.0e-59 231.9 184 62.5
EL10Ac5g11271 Beta vulgaris HOM05D005248 ORTHO05D006409 4.0e-59 231.9 190 62.1
Medtr3g098480 Medicago truncatula HOM05D005248 ORTHO05D006409 4.0e-59 231.9 185 61.1
ClCG11G000550 Citrullus lanatus HOM05D005248 ORTHO05D006409 5.3e-59 231.5 174 64.4
MD14G1145800 Malus domestica HOM05D005248 ORTHO05D006409 6.9e-59 231.1 185 64.3
arahy.Tifrunner.gnm1.ann1.4X1L65 Arachis hypogaea HOM05D005248 ORTHO05D006409 1.2e-58 230.3 185 61.6
Aqoxy4G00470 Aquilegia oxysepala HOM05D005248 ORTHO05D006409 1.5e-58 229.9 191 63.4
Lj1g0011989 Lotus japonicus HOM05D005248 ORTHO05D006409 1.5e-58 229.9 185 62.2
arahy.Tifrunner.gnm1.ann1.JK6BKQ Arachis hypogaea HOM05D005248 ORTHO05D006409 3.4e-58 228.8 185 62.2
Thhalv10014773m.g Eutrema salsugineum HOM05D005248 ORTHO05D006409 3.4e-58 228.8 185 61.1
Carub.0008s1104 Capsella rubella HOM05D005248 ORTHO05D006409 4.5e-58 228.4 184 63.0
MD06G1128800 Malus domestica HOM05D005248 ORTHO05D006409 5.8e-58 228.0 185 63.2
Psat7g039840 Pisum sativum HOM05D005248 ORTHO05D006409 5.8e-58 228.0 182 63.2
VMungo0251G2692 Vigna mungo HOM05D005248 ORTHO05D006409 5.8e-58 228.0 189 63.0
CARHR257090 Cardamine hirsuta HOM05D005248 ORTHO05D006409 7.6e-58 227.6 185 59.5
MELO3C008773.2 Cucumis melo HOM05D005248 ORTHO05D006409 1.3e-57 226.9 137 73.7
Sp6g13210 Schrenkiella parvula HOM05D005248 ORTHO05D006409 1.7e-57 226.5 185 58.9
BcaB05g24022 Brassica carinata HOM05D005248 ORTHO05D006409 2.2e-57 226.1 185 60.5
arahy.Tifrunner.gnm1.ann1.X29WZH Arachis hypogaea HOM05D005248 ORTHO05D006409 2.9e-57 225.7 185 61.1
Hund10025 Selenicereus undatus HOM05D005248 ORTHO05D006409 2.9e-57 225.7 189 60.8
BraSC35t45996Z Brassica rapa HOM05D005248 ORTHO05D006409 3.8e-57 225.3 190 60.0
Glyma.06G162900 Glycine max HOM05D005248 ORTHO05D006409 3.8e-57 225.3 188 62.8
Sc14g0003150 Simmondsia chinensis HOM05D005248 ORTHO05D006409 3.8e-57 225.3 184 61.4
AUR62043379 Chenopodium quinoa HOM05D005248 ORTHO05D006409 4.9e-57 224.9 190 61.6
PGR119G0545 Punica granatum HOM05D005248 ORTHO05D006409 4.9e-57 224.9 192 59.9
A10p08030 Brassica napus HOM05D005248 ORTHO05D006409 6.5e-57 224.6 185 60.0
Nn3g16250 Nelumbo nucifera HOM05D005248 ORTHO05D006409 8.4e-57 224.2 185 62.7
AUR62043864 Chenopodium quinoa HOM05D005248 ORTHO05D006409 1.1e-56 223.8 190 61.1
Hund02516 Selenicereus undatus HOM05D005248 ORTHO05D006409 1.9e-56 223.0 186 60.8
unitig_61.g26221 Utricularia gibba HOM05D005248 ORTHO05D006409 2.5e-56 222.6 185 58.9
AUR62032207 Chenopodium quinoa HOM05D005248 ORTHO05D006409 3.2e-56 222.2 190 61.6
Medtr8g096070 Medicago truncatula HOM05D005248 ORTHO05D006409 5.5e-56 221.5 185 60.0
Eucgr.H01475 Eucalyptus grandis HOM05D005248 ORTHO05D006409 1.2e-55 220.3 194 59.3
vmacro19116 Vaccinium macrocarpon HOM05D000402 ORTHO05D000263 1.6e-55 219.9 199 57.8
BcaC03g14629 Brassica carinata HOM05D005248 ORTHO05D006409 2.1e-55 219.5 184 59.2
Haze_07087 Corylus avellana HOM05D005248 ORTHO05D006409 2.7e-55 219.2 227 55.5
Atru.chr10.902 Acer truncatum HOM05D005248 ORTHO05D006409 3.5e-55 218.8 162 64.8
vmacro16762 Vaccinium macrocarpon HOM05D005248 ORTHO05D006409 3.5e-55 218.8 157 69.4
CSS0028005 Camellia sinensis var. sinensis HOM05D005248 ORTHO05D006409 6.0e-55 218.0 161 68.3
Lalb_Chr12g0202581 Lupinus albus HOM05D005248 ORTHO05D006409 1.0e-54 217.2 187 61.0
A02p12520 Brassica napus HOM05D005248 ORTHO05D006409 1.3e-54 216.9 185 60.0
Sabra15G0130900 Salix brachista HOM05D001551 ORTHO05D000263 1.3e-54 216.9 251 48.2
BolC9t56844H Brassica oleracea HOM05D005248 ORTHO05D006409 1.8e-54 216.5 186 58.6
CDE06G0011 Ceratophyllum demersum HOM05D005248 ORTHO05D006409 6.7e-54 214.5 187 61.5
Zm00001eb198100 Zea mays HOM05D005248 ORTHO05D006409 3.3e-53 212.2 185 58.4
Aa31LG3G7530 Aethionema arabicum HOM05D005248 ORTHO05D006409 4.3e-53 211.8 159 64.8
Glyma.08G007100 Glycine max HOM05D005248 ORTHO05D006409 7.4e-53 211.1 178 58.4
Lj9C488G13 Lonicera japonica HOM05D005248 ORTHO05D006409 2.1e-52 209.5 189 58.7
BraA02t06314Z Brassica rapa HOM05D005248 ORTHO05D006409 2.8e-52 209.1 190 57.4
Ah.11g047000 Amaranthus hybridus HOM05D005248 ORTHO05D006409 3.7e-52 208.8 130 70.0
BolC2t08204H Brassica oleracea HOM05D005248 ORTHO05D006409 8.2e-52 207.6 193 56.5
Ca_16820_v3 Cicer arietinum L. HOM05D000402 ORTHO05D000263 1.4e-51 206.8 170 60.0
Sabra15G0128600 Salix brachista HOM05D005248 ORTHO05D006409 1.4e-51 206.8 275 44.4
C09p39650 Brassica napus HOM05D005248 ORTHO05D006409 2.4e-51 206.1 185 56.8
ATR0582G036 Amborella trichopoda HOM05D005248 ORTHO05D006409 2.0e-50 203.0 185 59.5
Os11g0528300 Oryza sativa ssp. japonica HOM05D005248 ORTHO05D006409 4.5e-50 201.8 129 72.1
HPP92_006440 Vanilla planifolia HOM05D005248 ORTHO05D006409 5.9e-50 201.4 187 58.3
CiPaw.12G000300 Carya illinoinensis HOM05D005248 ORTHO05D006409 1.7e-49 199.9 167 62.3
C02p20620 Brassica napus HOM05D005248 ORTHO05D006409 1.1e-48 197.2 117 73.5
PSO541G2841 Papaver somniferum HOM05D005248 ORTHO05D006409 2.1e-47 193.0 128 72.7
Nitab4.5_0002540g0030 Nicotiana tabacum HOM05D005248 ORTHO05D006409 2.7e-47 192.6 130 77.7
Lsat_1_v5_gn_9_37901 Lactuca sativa HOM05D005248 ORTHO05D006409 1.9e-45 186.4 145 61.4
SMO146G0118 Selaginella moellendorffii HOM05D005248 ORTHO05D006409 2.3e-38 162.9 123 57.7
Mapoly0022s0036 Marchantia polymorpha HOM05D005248 ORTHO05D006409 1.5e-37 160.2 124 58.9
Gohir.A07G044532 Gossypium hirsutum HOM05D005248 ORTHO05D006409 2.0e-37 159.8 87 78.2
Pp3c16_25170 Physcomitrium patens HOM05D005248 ORTHO05D006409 4.4e-37 158.7 125 56.0
Rhsim12G0181600 Rhododendron simsii HOM05D005248 ORTHO05D006409 2.6e-34 149.4 106 68.9
Lj4g0025558 Lotus japonicus HOM05D005248 ORTHO05D006409 2.3e-30 136.3 139 54.7
Zm00001eb113310 Zea mays HOM05D005248 ORTHO05D006409 2.3e-30 136.3 79 72.2
PSO675G1946 Papaver somniferum HOM05D005248 ORTHO05D006409 6.7e-30 134.8 133 56.4
Gohir.A11G038833 Gossypium hirsutum HOM05D005248 ORTHO05D006409 1.1e-29 134.0 86 67.4
Cre12.g550750 Chlamydomonas reinhardtii HOM05D005248 ORTHO05D006409 2.8e-28 129.4 129 48.8
BcaC04g20744 Brassica carinata HOM05D005248 ORTHO05D006409 1.1e-27 127.5 72 73.6
TPR.G12753 Trifolium pratense HOM05D005248 ORTHO05D006409 1.6e-26 123.6 72 72.2
CAN.G412.4 Capsicum annuum HOM05D005248 ORTHO05D006409 3.6e-23 112.5 60 85.0
QL10p017282 Quercus lobata HOM05D005248 ORTHO05D006409 3.6e-23 112.5 65 69.2
PRCOL_00003706 Prasinoderma coloniale HOM05D005248 ORTHO05D006409 8.8e-22 107.8 110 43.6
TPR.G20580 Trifolium pratense HOM05D005248 ORTHO05D006409 1.5e-21 107.1 112 56.2
MCO01G238 Micromonas commoda HOM05D005248 ORTHO05D006409 1.4e-19 100.5 143 37.1
Gorai.007G045300 Gossypium raimondii HOM05D005248 ORTHO05D006409 1.4e-11 73.9 98 50.0
TPR.G21935 Trifolium pratense HOM05D005248 ORTHO05D006409 6.5e-09 65.1 35 77.1
AagrBONN_evm.TU.Sc2ySwM_368.2623 Anthoceros agrestis HOM05D005248 ORTHO05D006409 2.1e-07 60.1 57 45.6


User provided reference genes

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