Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000976g0090 Nicotiana tabacum HOM05D005199 ORTHO05D006277 3.6e-196 688.3 422 100.0
Nitab4.5_0011600g0020 Nicotiana tabacum HOM05D005199 ORTHO05D006277 1.9e-176 622.9 425 92.9
Peaxi162Scf00314g00633 Petunia axillaris HOM05D005199 ORTHO05D006277 1.8e-163 579.7 422 85.5
Sopen03g037080 Solanum pennellii HOM05D005199 ORTHO05D006277 2.6e-162 575.9 426 86.2
CAN.G843.7 Capsicum annuum HOM05D005199 ORTHO05D006277 1.3e-158 563.5 432 82.4
Ciclev10033942m.g Citrus clementina HOM05D005199 ORTHO05D006277 3.9e-150 535.4 415 69.9
Cfa018703 Carpinus fangiana HOM05D005199 ORTHO05D006277 6.7e-150 534.6 425 67.8
Manes.06G127100 Manihot esculenta HOM05D005199 ORTHO05D006277 1.3e-148 530.4 419 74.9
QL10p000401 Quercus lobata HOM05D005199 ORTHO05D006277 2.8e-148 529.3 419 72.6
Potri.015G106900 Populus trichocarpa HOM05D005199 ORTHO05D006277 1.4e-147 526.9 422 66.8
CiPaw.12G000800 Carya illinoinensis HOM05D005199 ORTHO05D006277 2.4e-147 526.2 420 69.3
Rhsim08G0198200 Rhododendron simsii HOM05D005199 ORTHO05D006277 4.0e-147 525.4 422 74.9
Sabra15G0127400 Salix brachista HOM05D005199 ORTHO05D006277 1.2e-146 523.9 419 68.0
Sabra15G0129500 Salix brachista HOM05D005199 ORTHO05D006277 1.2e-146 523.9 419 68.0
CSS0050347 Camellia sinensis var. sinensis HOM05D005199 ORTHO05D006277 2.0e-146 523.1 420 81.2
Migut.I00669 Erythranthe guttata HOM05D005199 ORTHO05D006277 3.4e-146 522.3 420 79.0
SalBow7G2845 Salvia bowleyana HOM05D005199 ORTHO05D006277 2.9e-145 519.2 419 76.6
Haze_07093 Corylus avellana HOM05D005199 ORTHO05D006277 3.8e-145 518.8 421 72.2
Dinv13715 Davidia involucrata HOM05D005199 ORTHO05D006277 4.9e-145 518.5 424 72.6
GSVIVG01008655001 Vitis vinifera HOM05D005199 ORTHO05D006277 1.4e-144 516.9 423 75.2
Atru.chr6.1926 Acer truncatum HOM05D005199 ORTHO05D006277 1.9e-144 516.5 420 76.0
Cc04_g05820 Coffea canephora HOM05D005199 ORTHO05D006277 5.5e-144 515.0 422 68.5
Thecc.03G141200 Theobroma cacao HOM05D005199 ORTHO05D006277 1.6e-143 513.5 420 74.8
Duzib205G1536 Durio zibethinus HOM05D005199 ORTHO05D006277 1.0e-142 510.8 421 76.2
Prupe.5G140700 Prunus persica HOM05D005199 ORTHO05D006277 1.3e-142 510.4 431 68.7
Hma1.2p1_0577F.1_g182220 Hydrangea macrophylla HOM05D005199 ORTHO05D006277 1.8e-142 510.0 402 76.4
SGA_v2.0_scaffold37G14675 Striga asiatica HOM05D005199 ORTHO05D006277 1.8e-142 510.0 421 75.3
vmacro19190 Vaccinium macrocarpon HOM05D005199 ORTHO05D006277 1.8e-142 510.0 422 77.5
Nn3g16267 Nelumbo nucifera HOM05D005199 ORTHO05D006277 1.5e-141 506.9 412 73.5
TWI39G0590 Tripterygium wilfordii HOM05D005199 ORTHO05D006277 3.3e-141 505.8 422 67.8
Medtr3g098560 Medicago truncatula HOM05D005199 ORTHO05D006277 1.3e-140 503.8 422 72.5
MD06G1129500 Malus domestica HOM05D005199 ORTHO05D006277 4.8e-140 501.9 432 63.4
Ca_10877_v3 Cicer arietinum L. HOM05D005199 ORTHO05D006277 2.4e-139 499.6 419 71.4
MD14G1146700 Malus domestica HOM05D005199 ORTHO05D006277 2.4e-139 499.6 426 71.8
Dinv23231 Davidia involucrata HOM05D005199 ORTHO05D006277 4.0e-139 498.8 414 76.1
Actinidia25514 Actinidia chinensis HOM05D005199 ORTHO05D006277 1.2e-138 497.3 419 75.7
Psat5g056040 Pisum sativum HOM05D005199 ORTHO05D006277 1.2e-138 497.3 422 71.6
Lj1g0022547 Lotus japonicus HOM05D005199 ORTHO05D006277 2.0e-138 496.5 421 72.4
Glyma.06G163600 Glycine max HOM05D005199 ORTHO05D006277 3.4e-138 495.7 424 72.9
TAR374G0192 Trochodendron aralioides HOM05D005199 ORTHO05D006277 4.5e-138 495.4 401 74.3
Manes.14G044200 Manihot esculenta HOM05D005199 ORTHO05D006277 5.8e-138 495.0 416 71.4
VMungo1309G0841 Vigna mungo HOM05D005199 ORTHO05D006277 1.3e-137 493.8 425 71.5
Oeu013661.1 Olea europaea HOM05D005199 ORTHO05D006277 2.2e-137 493.0 418 73.4
Gohir.A07G046500 Gossypium hirsutum HOM05D005199 ORTHO05D006277 1.8e-134 483.4 426 69.5
arahy.Tifrunner.gnm1.ann1.4TKD14 Arachis hypogaea HOM05D005199 ORTHO05D006277 3.0e-134 482.6 418 75.8
Gohir.D07G050800 Gossypium hirsutum HOM05D005199 ORTHO05D006277 3.0e-134 482.6 426 71.6
RcHm_v2.0_Chr7g0188591 Rosa chinensis HOM05D005199 ORTHO05D006277 1.9e-133 479.9 424 72.9
ECA232G4131 Erigeron canadensis HOM05D005199 ORTHO05D006277 2.5e-133 479.6 424 60.8
Gorai.001G053900 Gossypium raimondii HOM05D005199 ORTHO05D006277 7.4e-133 478.0 426 73.0
HanXRQChr09g0273821 Helianthus annuus HOM05D005199 ORTHO05D006277 7.4e-133 478.0 421 64.1
TWI14G0958 Tripterygium wilfordii HOM05D005199 ORTHO05D006277 7.4e-133 478.0 426 65.0
FAN04G2629 Fragaria x ananassa HOM05D005199 ORTHO05D006277 3.7e-132 475.7 425 74.6
Phvul.009G160900 Phaseolus vulgaris HOM05D005199 ORTHO05D006277 3.7e-132 475.7 425 71.8
Cpa.g.sc13.181 Carica papaya HOM05D005199 ORTHO05D006277 1.8e-131 473.4 420 61.7
FAN18G4150 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.8e-131 473.4 423 73.8
FAN13G0330 Fragaria x ananassa HOM05D005199 ORTHO05D006277 2.4e-131 473.0 423 71.4
SHI14097 Sapria himalayana HOM05D005199 ORTHO05D006277 4.1e-131 472.2 450 57.6
arahy.Tifrunner.gnm1.ann1.P6GRAY Arachis hypogaea HOM05D005199 ORTHO05D006277 6.9e-131 471.5 422 71.1
Duzib084G1266 Durio zibethinus HOM05D005199 ORTHO05D006277 2.0e-130 469.9 414 68.8
FAN08G3145 Fragaria x ananassa HOM05D005199 ORTHO05D006277 2.6e-130 469.5 423 70.9
Aa31LG11G1640 Aethionema arabicum HOM05D005199 ORTHO05D006277 1.1e-128 464.2 424 67.2
CsaV3_1G000050 Cucumis sativus L. HOM05D005199 ORTHO05D006277 1.4e-128 463.8 427 71.2
MELO3C026157.2 Cucumis melo HOM05D005199 ORTHO05D006277 4.2e-128 462.2 427 71.2
COL.COLO4_37264 Corchorus olitorius HOM05D005199 ORTHO05D006277 6.1e-127 458.4 393 74.3
Lsat_1_v5_gn_4_84380 Lactuca sativa HOM05D005199 ORTHO05D006277 3.0e-126 456.1 433 63.0
ClCG06G018380 Citrullus lanatus HOM05D005199 ORTHO05D006277 5.1e-126 455.3 376 77.7
DCAR_025645 Daucus carota HOM05D005199 ORTHO05D006277 1.5e-125 453.8 409 67.5
Lj9A487G53 Lonicera japonica HOM05D005199 ORTHO05D006277 1.9e-125 453.4 388 64.2
BcaC01g02441 Brassica carinata HOM05D005199 ORTHO05D006277 3.3e-125 452.6 429 63.4
DCAR_016338 Daucus carota HOM05D005199 ORTHO05D006277 4.3e-125 452.2 417 60.0
Thhalv10005606m.g Eutrema salsugineum HOM05D005199 ORTHO05D006277 1.7e-124 450.3 421 70.5
Carub.0008s2255 Capsella rubella HOM05D005199 ORTHO05D006277 2.2e-124 449.9 425 69.9
CDE06G1181 Ceratophyllum demersum HOM05D005199 ORTHO05D006277 6.3e-124 448.4 415 57.6
A06p28520 Brassica napus HOM05D005199 ORTHO05D006277 8.2e-124 448.0 433 63.0
BraA06t25798Z Brassica rapa HOM05D005199 ORTHO05D006277 8.2e-124 448.0 433 63.0
CDE02G3820 Ceratophyllum demersum HOM05D005199 ORTHO05D006277 8.2e-124 448.0 415 57.8
C03p65260 Brassica napus HOM05D005199 ORTHO05D006277 1.8e-123 446.8 433 62.8
BolC3t18779H Brassica oleracea HOM05D005199 ORTHO05D006277 1.8e-123 446.8 433 62.8
BcaC03g18101 Brassica carinata HOM05D005199 ORTHO05D006277 5.3e-123 445.3 422 71.8
A02p41740 Brassica napus HOM05D005199 ORTHO05D006277 5.3e-123 445.3 425 70.8
C02p61660 Brassica napus HOM05D005199 ORTHO05D006277 5.3e-123 445.3 422 71.8
PGR102G3000 Punica granatum HOM05D005199 ORTHO05D006277 6.9e-123 444.9 406 69.7
AT5G61850 Arabidopsis thaliana HOM05D005199 ORTHO05D006277 1.2e-122 444.1 427 64.4
THA.LOC104818285 Tarenaya hassleriana HOM05D005199 ORTHO05D006277 1.2e-122 444.1 425 64.9
Sp2g25050 Schrenkiella parvula HOM05D005199 ORTHO05D006277 2.6e-122 443.0 424 61.1
BcaB07g29818 Brassica carinata HOM05D005199 ORTHO05D006277 1.7e-121 440.3 422 67.1
BolC2t12224H Brassica oleracea HOM05D005199 ORTHO05D006277 2.9e-121 439.5 426 71.1
BraA02t09114Z Brassica rapa HOM05D005199 ORTHO05D006277 2.9e-121 439.5 429 70.2
MBI10_g44970_MAGBIO Magnolia biondii HOM05D005199 ORTHO05D006277 5.0e-121 438.7 360 78.1
CARHR275620 Cardamine hirsuta HOM05D005199 ORTHO05D006277 6.5e-121 438.3 424 71.5
THA.LOC104801769 Tarenaya hassleriana HOM05D005199 ORTHO05D006277 6.5e-121 438.3 411 63.5
AL8G38620 Arabidopsis lyrata HOM05D005199 ORTHO05D006277 1.2e-119 434.1 424 71.7
BcaB02g09607 Brassica carinata HOM05D005199 ORTHO05D006277 1.6e-119 433.7 423 63.4
Sc22g0003300 Simmondsia chinensis HOM05D005199 ORTHO05D006277 1.8e-118 430.3 480 62.3
Sed0007314 Sechium edule HOM05D005199 ORTHO05D006277 1.4e-115 420.6 370 67.6
Eucgr.K02192 Eucalyptus grandis HOM05D005199 ORTHO05D006277 5.3e-115 418.7 347 65.4
PSO478G1920 Papaver somniferum HOM05D005199 ORTHO05D006277 7.7e-114 414.8 442 62.7
EL10Ac5g11279 Beta vulgaris HOM05D005199 ORTHO05D006277 1.4e-112 410.6 405 57.3
AUR62032216 Chenopodium quinoa HOM05D005199 ORTHO05D006277 1.4e-112 410.6 370 61.1
unitig_0.g1099 Utricularia gibba HOM05D005199 ORTHO05D006277 2.3e-110 403.3 316 69.3
Ah.02g114560 Amaranthus hybridus HOM05D005199 ORTHO05D006277 4.4e-109 399.1 372 59.1
ATR0582G251 Amborella trichopoda HOM05D005199 ORTHO05D006277 1.3e-108 397.5 435 61.8
FAN25G0693 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.7e-108 397.1 433 59.6
TPR.G25958 Trifolium pratense HOM05D005199 ORTHO05D006277 8.2e-108 394.8 355 67.0
FvH4_3g04170 Fragaria vesca HOM05D005199 ORTHO05D006277 2.4e-107 393.3 426 61.0
FAN11G0779 Fragaria x ananassa HOM05D005199 ORTHO05D006277 7.0e-107 391.7 425 60.9
FvH4_3g03530 Fragaria vesca HOM05D005199 ORTHO05D006277 1.6e-106 390.6 415 59.5
FAN11G0489 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.6e-106 390.6 415 58.8
SGA_v2.0_scaffold168G38552 Striga asiatica HOM05D005199 ORTHO05D006277 1.6e-106 390.6 374 56.4
unitig_61.g26224 Utricularia gibba HOM05D005199 ORTHO05D006277 2.0e-106 390.2 307 75.6
arahy.Tifrunner.gnm1.ann1.33WSUR Arachis hypogaea HOM05D005199 ORTHO05D006277 1.0e-105 387.9 421 50.4
FAN21G1800 Fragaria x ananassa HOM05D005199 ORTHO05D006277 2.2e-105 386.7 418 58.6
arahy.Tifrunner.gnm1.ann1.31D2RV Arachis hypogaea HOM05D005199 ORTHO05D006277 1.1e-104 384.4 416 50.7
Aqoxy5G03105 Aquilegia oxysepala HOM05D005199 ORTHO05D006277 5.5e-104 382.1 416 60.6
Zm00001eb430240 Zea mays HOM05D005199 ORTHO05D006277 4.2e-96 355.9 354 58.5
Os04g0598300 Oryza sativa ssp. japonica HOM05D005199 ORTHO05D006277 2.3e-94 350.1 352 66.2
AUR62044212 Chenopodium quinoa HOM05D005199 ORTHO05D006277 1.6e-90 337.4 450 47.3
SEGI_03714 Sequoiadendron giganteum HOM05D005199 ORTHO05D006277 3.5e-90 336.3 394 47.7
AUR62043310 Chenopodium quinoa HOM05D005199 ORTHO05D006277 1.3e-89 334.3 370 53.5
Mapoly0113s0034 Marchantia polymorpha HOM05D005199 ORTHO05D006277 3.0e-86 323.2 354 49.7
Zm00001eb071990 Zea mays HOM05D005199 ORTHO05D006277 2.0e-85 320.5 396 52.0
SEGI_00497 Sequoiadendron giganteum HOM05D005199 ORTHO05D006277 9.8e-85 318.2 338 50.3
Lalb_Chr11g0069151 Lupinus albus HOM05D005199 ORTHO05D006277 1.4e-83 314.3 184 82.6
Migut.D01179 Erythranthe guttata HOM05D005199 ORTHO05D006277 2.5e-80 303.5 185 78.4
Pp3c3_11670 Physcomitrium patens HOM05D005199 ORTHO05D006277 1.8e-78 297.4 364 45.6
HPP92_021614 Vanilla planifolia HOM05D005199 ORTHO05D006277 6.4e-76 288.9 372 55.6
Pp3c13_8760 Physcomitrium patens HOM05D005199 ORTHO05D006277 7.0e-75 285.4 342 46.2
Lalb_Chr07g0183841 Lupinus albus HOM05D005199 ORTHO05D006277 6.6e-73 278.9 291 62.9
FvH4_5g09660 Fragaria vesca HOM05D005199 ORTHO05D006277 8.6e-73 278.5 292 75.3
Lalb_Chr12g0202561 Lupinus albus HOM05D005199 ORTHO05D006277 4.9e-68 262.7 290 61.4
PGSC0003DMG400014174 Solanum tuberosum HOM05D005199 ORTHO05D006277 1.1e-67 261.5 127 96.1
Glyma.04G202002 Glycine max HOM05D005199 ORTHO05D006277 1.4e-62 244.6 147 81.6
Sabra15G0071900 Salix brachista HOM05D005199 ORTHO05D006277 2.3e-57 227.3 264 53.0
Lalb_Chr07g0183831 Lupinus albus HOM05D005199 ORTHO05D006277 2.4e-54 217.2 128 78.9
Actinidia18295 Actinidia chinensis HOM05D005199 ORTHO05D006277 1.3e-52 211.5 164 70.7
SMO347G0183 Selaginella moellendorffii HOM05D005199 ORTHO05D006277 5.8e-45 186.0 121 71.1
FAN25G1078 Fragaria x ananassa HOM05D005199 ORTHO05D006277 4.9e-44 183.0 179 53.1
CBR_g60061 Chara braunii HOM05D005199 ORTHO05D006277 1.2e-42 178.3 342 35.7
Lalb_Chr12g0202551 Lupinus albus HOM05D005199 ORTHO05D006277 1.0e-41 175.3 104 78.8
Lalb_Chr11g0069141 Lupinus albus HOM05D005199 ORTHO05D006277 2.2e-36 157.5 158 56.3
AagrBONN_evm.TU.Sc2ySwM_228.2166 Anthoceros agrestis HOM05D005199 ORTHO05D006277 6.9e-30 136.0 277 32.9
CANSAT11G1658 Cannabis sativa HOM05D005199 ORTHO05D006277 2.1e-26 124.4 76 80.3
SMO347G0146 Selaginella moellendorffii HOM05D005199 ORTHO05D006277 9.7e-16 89.0 83 51.8
CDE05G0289 Ceratophyllum demersum HOM05D000263 ORTHO05D000213 4.5e-13 80.1 45 82.2


User provided reference genes

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