Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000976g0010 Nicotiana tabacum HOM05D006891 ORTHO05D008671 6.7e-182 640.6 326 100.0
PGSC0003DMG400014243 Solanum tuberosum HOM05D006891 ORTHO05D008671 6.0e-175 617.5 328 97.0
Sopen03g037150 Solanum pennellii HOM05D006891 ORTHO05D008671 2.1e-172 609.0 328 96.0
Solyc03g118240.4 Solanum lycopersicum HOM05D006891 ORTHO05D008671 4.0e-171 604.7 328 95.1
CAN.G843.14 Capsicum annuum HOM05D006891 ORTHO05D008671 2.3e-158 562.4 327 90.2
Peaxi162Scf00314g00625 Petunia axillaris HOM05D006891 ORTHO05D008671 6.7e-158 560.8 329 89.1
Dinv13725 Davidia involucrata HOM05D006891 ORTHO05D008671 5.1e-150 534.6 329 82.7
CSS0004907 Camellia sinensis var. sinensis HOM05D006891 ORTHO05D008671 5.5e-144 514.6 326 78.8
Lj9C486T5 Lonicera japonica HOM05D006891 ORTHO05D008671 9.4e-144 513.8 326 79.4
Actinidia18305 Actinidia chinensis HOM05D006891 ORTHO05D008671 1.4e-142 510.0 326 78.5
Nn3g16285 Nelumbo nucifera HOM05D006891 ORTHO05D008671 4.4e-141 505.0 326 78.5
TAR475G0005 Trochodendron aralioides HOM05D006891 ORTHO05D008671 4.8e-140 501.5 333 77.8
Gorai.001G054400 Gossypium raimondii HOM05D006891 ORTHO05D008671 4.5e-138 495.0 331 78.5
MSTRG.4642 Avicennia marina HOM05D006891 ORTHO05D008671 1.3e-137 493.4 327 76.5
Gohir.D07G051300 Gossypium hirsutum HOM05D006891 ORTHO05D008671 2.9e-137 492.3 331 77.9
Gohir.A07G047000 Gossypium hirsutum HOM05D006891 ORTHO05D008671 5.0e-137 491.5 331 77.9
Migut.D01186 Erythranthe guttata HOM05D006891 ORTHO05D008671 1.5e-136 490.0 326 76.7
COL.COLO4_37249 Corchorus olitorius HOM05D006891 ORTHO05D008671 3.2e-136 488.8 329 78.1
TWI39G1149 Tripterygium wilfordii HOM05D006891 ORTHO05D008671 5.5e-136 488.0 333 78.1
Cfa018711 Carpinus fangiana HOM05D006891 ORTHO05D008671 7.2e-136 487.6 333 76.6
Eucgr.G02043 Eucalyptus grandis HOM05D006891 ORTHO05D008671 1.6e-135 486.5 334 76.6
QL10p000565 Quercus lobata HOM05D006891 ORTHO05D008671 1.6e-135 486.5 333 77.2
Haze_07102 Corylus avellana HOM05D006891 ORTHO05D008671 2.7e-135 485.7 329 77.5
vmacro19179 Vaccinium macrocarpon HOM05D006891 ORTHO05D008671 2.7e-135 485.7 332 77.7
PSO017G2699 Papaver somniferum HOM05D006891 ORTHO05D008671 4.7e-135 485.0 331 76.4
Cpa.g.sc13.164 Carica papaya HOM05D006891 ORTHO05D008671 8.0e-135 484.2 329 76.6
Ciclev10032123m.g Citrus clementina HOM05D006891 ORTHO05D008671 1.8e-134 483.0 330 77.0
PSO478G3300 Papaver somniferum HOM05D006891 ORTHO05D008671 1.8e-134 483.0 331 75.8
CiPaw.12G001000 Carya illinoinensis HOM05D006891 ORTHO05D008671 6.7e-134 481.1 333 75.1
Thecc.03G139800 Theobroma cacao HOM05D006891 ORTHO05D008671 6.7e-134 481.1 335 76.7
Duzib205G0665 Durio zibethinus HOM05D006891 ORTHO05D008671 7.5e-133 477.6 332 77.1
DCAR_025652 Daucus carota HOM05D006891 ORTHO05D008671 9.7e-133 477.2 327 75.5
SGA_v2.0_scaffold40G15677 Striga asiatica HOM05D006891 ORTHO05D008671 2.2e-132 476.1 325 75.1
Lj4g0024376 Lotus japonicus HOM05D006891 ORTHO05D008671 6.3e-132 474.6 329 76.9
Glyma.05G200500 Glycine max HOM05D006891 ORTHO05D008671 2.4e-131 472.6 327 77.7
Sc04g0000210 Simmondsia chinensis HOM05D006891 ORTHO05D008671 3.1e-131 472.2 331 76.4
Lalb_Chr13g0296991 Lupinus albus HOM05D006891 ORTHO05D008671 4.1e-131 471.9 327 74.6
VMungo0251G3529 Vigna mungo HOM05D006891 ORTHO05D008671 5.3e-131 471.5 329 76.6
Glyma.08G007900 Glycine max HOM05D006891 ORTHO05D008671 7.0e-131 471.1 330 75.8
Phvul.002G281900 Phaseolus vulgaris HOM05D006891 ORTHO05D008671 1.6e-130 469.9 327 76.8
Atru.chr6.1910 Acer truncatum HOM05D006891 ORTHO05D008671 7.7e-130 467.6 328 75.6
Rhsim08G0196800 Rhododendron simsii HOM05D006891 ORTHO05D008671 1.0e-129 467.2 328 75.0
Prupe.5G142500 Prunus persica HOM05D006891 ORTHO05D008671 2.2e-129 466.1 329 73.9
Aqoxy5G03144 Aquilegia oxysepala HOM05D006891 ORTHO05D008671 6.5e-129 464.5 326 73.6
MBI04_g35563_MAGBIO Magnolia biondii HOM05D006891 ORTHO05D008671 6.5e-129 464.5 331 72.8
Lsat_1_v5_gn_4_84561 Lactuca sativa HOM05D006891 ORTHO05D008671 1.1e-128 463.8 327 75.5
FvH4_5g09430 Fragaria vesca HOM05D006891 ORTHO05D008671 5.5e-128 461.5 326 73.6
HanXRQChr09g0273851 Helianthus annuus HOM05D006891 ORTHO05D008671 7.2e-128 461.1 331 74.9
MD14G1147900 Malus domestica HOM05D006891 ORTHO05D008671 7.2e-128 461.1 328 72.9
arahy.Tifrunner.gnm1.ann1.5G0V08 Arachis hypogaea HOM05D006891 ORTHO05D008671 9.4e-128 460.7 329 73.6
HanXRQChr11g0350211 Helianthus annuus HOM05D006891 ORTHO05D008671 9.4e-128 460.7 331 74.9
FAN04G1325 Fragaria x ananassa HOM05D006891 ORTHO05D008671 6.1e-127 458.0 324 73.5
Sabra12G0078900 Salix brachista HOM05D006891 ORTHO05D008671 1.4e-126 456.8 347 70.0
PGR142G3013 Punica granatum HOM05D006891 ORTHO05D008671 2.3e-126 456.1 332 72.6
RcHm_v2.0_Chr7g0188761 Rosa chinensis HOM05D006891 ORTHO05D008671 2.3e-126 456.1 327 73.1
FAN08G0367 Fragaria x ananassa HOM05D006891 ORTHO05D008671 1.2e-125 453.8 324 72.8
MD06G1131500 Malus domestica HOM05D006891 ORTHO05D008671 1.2e-125 453.8 329 72.6
Manes.06G126400 Manihot esculenta HOM05D006891 ORTHO05D008671 1.5e-125 453.4 329 72.6
FAN18G0906 Fragaria x ananassa HOM05D006891 ORTHO05D008671 1.3e-124 450.3 324 71.6
GSVIVG01008643001 Vitis vinifera HOM05D006891 ORTHO05D008671 1.3e-124 450.3 325 73.8
Sed0026594 Sechium edule HOM05D006891 ORTHO05D008671 2.7e-122 442.6 323 70.9
CsaV3_1G000080 Cucumis sativus L. HOM05D006891 ORTHO05D008671 5.9e-122 441.4 273 81.0
Medtr8g100120 Medicago truncatula HOM05D006891 ORTHO05D008671 1.0e-121 440.7 327 72.2
ClCG06G018350 Citrullus lanatus HOM05D006891 ORTHO05D008671 2.3e-121 439.5 295 76.3
MELO3C026160.2 Cucumis melo HOM05D006891 ORTHO05D008671 5.0e-121 438.3 327 71.9
CDE11G0769 Ceratophyllum demersum HOM05D006891 ORTHO05D008671 8.6e-121 437.6 325 71.4
Aa31LG7G10590 Aethionema arabicum HOM05D006891 ORTHO05D008671 1.9e-120 436.4 300 74.7
Thhalv10025780m.g Eutrema salsugineum HOM05D006891 ORTHO05D008671 9.5e-120 434.1 298 74.2
Sp7g23060 Schrenkiella parvula HOM05D006891 ORTHO05D008671 1.6e-119 433.3 302 73.5
CARHR232470 Cardamine hirsuta HOM05D006891 ORTHO05D008671 6.1e-119 431.4 302 74.2
A03p55730 Brassica napus HOM05D006891 ORTHO05D008671 1.0e-118 430.6 324 70.1
BraA03t14640Z Brassica rapa HOM05D006891 ORTHO05D008671 1.4e-118 430.3 324 70.1
C07p53960 Brassica napus HOM05D006891 ORTHO05D008671 5.2e-118 428.3 324 69.4
AL7G28070 Arabidopsis lyrata HOM05D006891 ORTHO05D008671 6.8e-118 427.9 300 74.3
AT4G25080 Arabidopsis thaliana HOM05D006891 ORTHO05D008671 6.8e-118 427.9 302 73.5
BcaNung03997 Brassica carinata HOM05D006891 ORTHO05D008671 6.8e-118 427.9 301 73.4
arahy.Tifrunner.gnm1.ann1.0QZ944 Arachis hypogaea HOM05D006891 ORTHO05D008671 8.8e-118 427.6 329 70.2
SalBow1G6359 Salvia bowleyana HOM05D006891 ORTHO05D008671 8.8e-118 427.6 327 70.0
Carub.0007s1596 Capsella rubella HOM05D006891 ORTHO05D008671 1.2e-117 427.2 302 73.2
BcaC09g50812 Brassica carinata HOM05D006891 ORTHO05D008671 2.6e-117 426.0 283 76.0
A01p16330 Brassica napus HOM05D006891 ORTHO05D008671 3.4e-117 425.6 283 76.0
BraA01t01588Z Brassica rapa HOM05D006891 ORTHO05D008671 4.4e-117 425.2 283 76.0
ECA232G2217 Erigeron canadensis HOM05D006891 ORTHO05D008671 5.7e-117 424.9 331 70.7
Psat7g039320 Pisum sativum HOM05D006891 ORTHO05D008671 5.7e-117 424.9 328 70.1
C01p20480 Brassica napus HOM05D006891 ORTHO05D008671 7.5e-117 424.5 283 75.6
BolC1t01979H Brassica oleracea HOM05D006891 ORTHO05D008671 7.5e-117 424.5 283 75.6
AUR62009532 Chenopodium quinoa HOM05D006891 ORTHO05D008671 1.8e-115 419.9 260 82.3
BolC7t45886H Brassica oleracea HOM05D006891 ORTHO05D008671 2.7e-114 416.0 324 68.2
TPR.G12963 Trifolium pratense HOM05D006891 ORTHO05D008671 4.3e-112 408.7 289 74.4
unitig_736.g22830 Utricularia gibba HOM05D002810 ORTHO05D003983 6.1e-111 404.8 314 67.8
HPP92_020658 Vanilla planifolia HOM05D006891 ORTHO05D008671 4.0e-110 402.1 305 68.5
CANSAT56G0245 Cannabis sativa HOM05D006891 ORTHO05D008671 1.5e-109 400.2 239 82.4
CANSAT56G1732 Cannabis sativa HOM05D006891 ORTHO05D008671 1.5e-109 400.2 239 82.4
Hund02505 Selenicereus undatus HOM05D006891 ORTHO05D008671 2.6e-109 399.4 233 86.7
Potri.012G106600 Populus trichocarpa HOM05D006891 ORTHO05D008671 5.4e-107 391.7 233 82.4
AUR62041695 Chenopodium quinoa HOM05D006891 ORTHO05D008671 9.2e-107 391.0 331 66.2
THA.LOC104811559 Tarenaya hassleriana HOM05D006891 ORTHO05D008671 1.8e-102 376.7 283 68.9
SEGI_33809 Sequoiadendron giganteum HOM05D006891 ORTHO05D008671 2.3e-102 376.3 304 64.5
ATR0579G076 Amborella trichopoda HOM05D006891 ORTHO05D008671 8.9e-102 374.4 242 76.4
AagrBONN_evm.TU.Sc2ySwM_368.2875 Anthoceros agrestis HOM05D006891 ORTHO05D008671 2.3e-97 359.8 270 66.7
SMO115G0098 Selaginella moellendorffii HOM05D006891 ORTHO05D008671 1.1e-96 357.5 327 59.9
Pp3c12_24890 Physcomitrium patens HOM05D006891 ORTHO05D008671 3.6e-95 352.4 269 66.5
Ah.11g046860 Amaranthus hybridus HOM05D006891 ORTHO05D008671 9.9e-93 344.4 211 82.5
Mapoly0112s0034 Marchantia polymorpha HOM05D006891 ORTHO05D008671 2.4e-91 339.7 302 59.6
EL10Ac5g11293 Beta vulgaris HOM05D006891 ORTHO05D008671 2.1e-90 336.7 286 65.4
Cre12.g498550 Chlamydomonas reinhardtii HOM05D006891 ORTHO05D008671 1.1e-86 324.3 267 61.0
Zm00001eb269720 Zea mays HOM05D006891 ORTHO05D008671 3.9e-81 305.8 319 53.3
MCO11G158 Micromonas commoda HOM05D006891 ORTHO05D008671 5.8e-77 292.0 285 55.1
Ca_16812_v3 Cicer arietinum L. HOM05D006891 ORTHO05D008671 3.5e-74 282.7 230 68.3
unitig_899.g14822 Utricularia gibba HOM05D002810 ORTHO05D003983 1.7e-73 280.4 309 53.7
Hma1.2p1_0577F.1_g182340 Hydrangea macrophylla HOM05D006891 ORTHO05D008671 2.6e-69 266.5 201 72.1
Dinv23219 Davidia involucrata HOM05D006891 ORTHO05D008671 1.3e-63 247.7 153 81.0
AUR62044303 Chenopodium quinoa HOM05D006891 ORTHO05D008671 3.4e-61 239.6 241 57.7
Potri.015G105702 Populus trichocarpa HOM05D006891 ORTHO05D008671 2.1e-58 230.3 231 56.3
Os06g0132400 Oryza sativa ssp. japonica HOM05D006891 ORTHO05D008671 3.1e-38 163.3 103 70.9
SGA_v2.0_scaffold377G50317 Striga asiatica HOM05D006891 ORTHO05D008671 5.7e-24 115.9 68 82.4
CBR_g32078 Chara braunii HOM05D006891 ORTHO05D008671 9.4e-19 98.6 81 59.3
Eucgr.G02044 Eucalyptus grandis HOM05D006891 ORTHO05D008671 1.6e-10 71.2 148 41.9
BraA03t14643Z Brassica rapa HOM05D006891 ORTHO05D033303 1.7e-07 61.2 64 57.8
Lsat_1_v5_gn_6_13761 Lactuca sativa HOM05D000295 ORTHO05D000188 8.3e-07 58.9 119 35.3


User provided reference genes

Program Settings