Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000975g0060 Nicotiana tabacum HOM05D000079 ORTHO05D283058 3.8e-63 244.6 118 100.0
Nitab4.5_0000236g0030 Nicotiana tabacum HOM05D000079 ORTHO05D283508 2.5e-14 82.4 38 92.1
Peaxi162Scf00170g00925 Petunia axillaris HOM05D000079 ORTHO05D000508 2.5e-14 82.4 55 67.3
Peaxi162Scf00550g00012 Petunia axillaris HOM05D000079 ORTHO05D000508 1.8e-12 76.3 43 74.4
Peaxi162Scf00488g00923 Petunia axillaris HOM05D000079 ORTHO05D000508 4.0e-12 75.1 42 73.8
vmacro00106 Vaccinium macrocarpon HOM05D000079 ORTHO05D000508 1.0e-07 60.5 71 39.4
Rhsim11G0039200 Rhododendron simsii HOM05D000079 ORTHO05D000508 1.8e-07 59.7 56 44.6
Rhsim11G0039700 Rhododendron simsii HOM05D000079 ORTHO05D000508 3.0e-07 58.9 56 44.6
Sopen05g011360 Solanum pennellii HOM05D000079 ORTHO05D000508 3.9e-07 58.5 34 67.6
Rhsim11G0038900 Rhododendron simsii HOM05D000079 ORTHO05D000508 5.1e-07 58.2 56 42.9
vmacro00105 Vaccinium macrocarpon HOM05D000079 ORTHO05D000508 5.1e-07 58.2 71 38.0
Peaxi162Scf00045g01112 Petunia axillaris HOM05D000079 ORTHO05D000508 6.7e-07 57.8 34 70.6
RcHm_v2.0_Chr7g0214451 Rosa chinensis HOM05D000079 ORTHO05D000508 6.7e-07 57.8 57 47.4
DCAR_028956 Daucus carota HOM05D000079 ORTHO05D000508 8.7e-07 57.4 52 44.2
Solyc05g015800.3 Solanum lycopersicum HOM05D000079 ORTHO05D000508 8.7e-07 57.4 34 67.6
Solyc11g020640.3 Solanum lycopersicum HOM05D000079 ORTHO05D000508 8.7e-07 57.4 34 64.7
PGSC0003DMG400009273 Solanum tuberosum HOM05D000079 ORTHO05D000508 8.7e-07 57.4 34 64.7
Rhsim11G0039500 Rhododendron simsii HOM05D000079 ORTHO05D000508 1.1e-06 57.0 56 42.9
RcHm_v2.0_Chr7g0214161 Rosa chinensis HOM05D000079 ORTHO05D000508 1.1e-06 57.0 54 46.3
Sopen08g001770 Solanum pennellii HOM05D000079 ORTHO05D000508 1.1e-06 57.0 54 46.3
Dinv09416 Davidia involucrata HOM05D000079 ORTHO05D000508 1.5e-06 56.6 56 46.4
RhsimUnG0223200 Rhododendron simsii HOM05D000079 ORTHO05D000508 1.5e-06 56.6 56 42.9
RhsimUnG0223600 Rhododendron simsii HOM05D000079 ORTHO05D000508 1.5e-06 56.6 56 42.9
PGSC0003DMG400024139 Solanum tuberosum HOM05D000079 ORTHO05D000508 1.5e-06 56.6 34 64.7
Hma1.2p1_1309F.1_g274760 Hydrangea macrophylla HOM05D000079 ORTHO05D000508 1.9e-06 56.2 52 44.2
Peaxi162Scf00135g01011 Petunia axillaris HOM05D000079 ORTHO05D000508 1.9e-06 56.2 55 49.1
Peaxi162Scf00550g00115 Petunia axillaris HOM05D000079 ORTHO05D000508 1.9e-06 56.2 55 49.1
Cc01_g00370 Coffea canephora HOM05D000079 ORTHO05D000508 2.5e-06 55.8 31 67.7
Cc01_g00380 Coffea canephora HOM05D000079 ORTHO05D000508 2.5e-06 55.8 31 67.7
RcHm_v2.0_Chr7g0214391 Rosa chinensis HOM05D000079 ORTHO05D000508 2.5e-06 55.8 43 55.8
ECA240G2371 Erigeron canadensis HOM05D000079 ORTHO05D000508 3.3e-06 55.5 31 64.5
MD06G1020400 Malus domestica HOM05D000079 ORTHO05D000508 3.3e-06 55.5 51 41.2
RcHm_v2.0_Chr7g0214351 Rosa chinensis HOM05D000079 ORTHO05D000508 3.3e-06 55.5 43 55.8
FAN16G0382 Fragaria x ananassa HOM05D000079 ORTHO05D000508 4.3e-06 55.1 54 44.4
Prupe.5G017800 Prunus persica HOM05D000079 ORTHO05D000508 4.3e-06 55.1 54 46.3
Prupe.5G018100 Prunus persica HOM05D000079 ORTHO05D000508 4.3e-06 55.1 54 46.3
Rhsim11G0039800 Rhododendron simsii HOM05D000079 ORTHO05D000508 4.3e-06 55.1 56 39.3
RcHm_v2.0_Chr5g0051841 Rosa chinensis HOM05D000079 ORTHO05D000508 4.3e-06 55.1 34 58.8
Solyc08g005770.3 Solanum lycopersicum HOM05D000079 ORTHO05D000508 4.3e-06 55.1 34 61.8
Cc01_g00040 Coffea canephora HOM05D000079 ORTHO05D000508 5.6e-06 54.7 52 48.1
QL09p020080 Quercus lobata HOM05D000079 ORTHO05D000508 5.6e-06 54.7 33 63.6
RcHm_v2.0_Chr7g0214231 Rosa chinensis HOM05D000079 ORTHO05D000508 5.6e-06 54.7 43 55.8
ECA240G0160 Erigeron canadensis HOM05D000079 ORTHO05D000508 7.4e-06 54.3 34 61.8
ECA240G3222 Erigeron canadensis HOM05D000079 ORTHO05D000508 7.4e-06 54.3 33 63.6
FvH4_3g40890 Fragaria vesca HOM05D000079 ORTHO05D000508 7.4e-06 54.3 33 60.6
FAN11G1206 Fragaria x ananassa HOM05D000079 ORTHO05D000508 7.4e-06 54.3 33 60.6
RhsimUnG0223300 Rhododendron simsii HOM05D000079 ORTHO05D000508 7.4e-06 54.3 56 39.3
RcHm_v2.0_Chr7g0214321 Rosa chinensis HOM05D000079 ORTHO05D000508 7.4e-06 54.3 34 61.8
Hma1.2p1_0720F.1_g208540 Hydrangea macrophylla HOM05D000079 ORTHO05D000508 9.6e-06 53.9 54 40.7


User provided reference genes

Program Settings