Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000968g0040 Nicotiana tabacum HOM05D006622 ORTHO05D007939 2.6e-101 372.1 190 100.0
Nitab4.5_0000630g0130 Nicotiana tabacum HOM05D006622 ORTHO05D007939 2.9e-76 288.9 280 58.9
Peaxi162Scf01270g00111 Petunia axillaris HOM05D006622 ORTHO05D007939 1.7e-65 253.1 212 67.0
PGSC0003DMG400044436 Solanum tuberosum HOM05D006622 ORTHO05D007939 2.5e-56 222.6 278 51.4
PGSC0003DMG402008996 Solanum tuberosum HOM05D006622 ORTHO05D007939 2.5e-56 222.6 278 51.4
Solyc01g079770.2 Solanum lycopersicum HOM05D006622 ORTHO05D007939 3.6e-55 218.8 278 50.7
Sopen01g031530 Solanum pennellii HOM05D006622 ORTHO05D007939 9.0e-54 214.2 278 50.4
CAN.G69.14 Capsicum annuum HOM05D006622 ORTHO05D007939 4.2e-51 205.3 276 47.5
Actinidia29467 Actinidia chinensis HOM05D006622 ORTHO05D007939 3.6e-47 192.2 277 45.8
CSS0023480 Camellia sinensis var. sinensis HOM05D006622 ORTHO05D007939 4.8e-47 191.8 277 46.6
CSS0048522 Camellia sinensis var. sinensis HOM05D006622 ORTHO05D007939 4.8e-47 191.8 277 46.6
Dinv27309 Davidia involucrata HOM05D006622 ORTHO05D007939 6.2e-47 191.4 289 46.7
Cc10_g11940 Coffea canephora HOM05D006622 ORTHO05D007939 2.4e-46 189.5 263 47.9
TAR628G0332 Trochodendron aralioides HOM05D006622 ORTHO05D007939 4.0e-46 188.7 282 45.0
vmacro00835 Vaccinium macrocarpon HOM05D006622 ORTHO05D007939 1.3e-44 183.7 273 44.0
RhsimUnG0092500 Rhododendron simsii HOM05D006622 ORTHO05D007939 1.7e-44 183.3 285 44.9
Aqoxy5G02345 Aquilegia oxysepala HOM05D006622 ORTHO05D007939 3.8e-44 182.2 272 44.1
PGR044G1562 Punica granatum HOM05D006622 ORTHO05D007939 1.1e-43 180.6 272 42.6
HanXRQChr09g0260611 Helianthus annuus HOM05D006622 ORTHO05D007939 1.9e-43 179.9 269 45.4
CANSAT35G1811 Cannabis sativa HOM05D006622 ORTHO05D007939 4.2e-43 178.7 274 42.7
Ciclev10001495m.g Citrus clementina HOM05D006622 ORTHO05D007939 5.5e-43 178.3 272 43.0
CANSAT35G0359 Cannabis sativa HOM05D006622 ORTHO05D007939 1.2e-42 177.2 274 43.1
Thecc.08G125800 Theobroma cacao HOM05D006622 ORTHO05D007939 1.6e-42 176.8 270 43.7
Oeu040412.1 Olea europaea HOM05D006622 ORTHO05D007939 2.1e-42 176.4 283 41.0
Prupe.1G495500 Prunus persica HOM05D006622 ORTHO05D007939 2.1e-42 176.4 277 43.0
MSTRG.24172 Avicennia marina HOM05D006622 ORTHO05D007939 6.0e-42 174.9 277 43.7
Cfa016021 Carpinus fangiana HOM05D006622 ORTHO05D007939 1.8e-41 173.3 274 43.1
CiPaw.06G031300 Carya illinoinensis HOM05D006622 ORTHO05D007939 5.1e-41 171.8 272 42.6
ECA232G1829 Erigeron canadensis HOM05D006622 ORTHO05D007939 1.1e-40 170.6 270 42.6
Lsat_1_v5_gn_4_135580 Lactuca sativa HOM05D006622 ORTHO05D007939 1.9e-40 169.9 268 43.7
Sabra05G0134700 Salix brachista HOM05D006622 ORTHO05D007939 2.5e-40 169.5 275 43.6
MD15G1347700 Malus domestica HOM05D006622 ORTHO05D007939 7.4e-40 167.9 277 41.5
Gohir.A05G268900 Gossypium hirsutum HOM05D006622 ORTHO05D007939 9.6e-40 167.5 278 41.0
Gorai.009G283400 Gossypium raimondii HOM05D006622 ORTHO05D007939 1.3e-39 167.2 275 41.1
Gohir.D05G270800 Gossypium hirsutum HOM05D006622 ORTHO05D007939 1.6e-39 166.8 275 41.1
Ca_16559_v3 Cicer arietinum L. HOM05D006622 ORTHO05D007939 2.1e-39 166.4 277 40.4
Eucgr.F04350 Eucalyptus grandis HOM05D006622 ORTHO05D007939 2.8e-39 166.0 264 40.9
TWI60G0608 Tripterygium wilfordii HOM05D006622 ORTHO05D007939 2.8e-39 166.0 270 43.3
Lj1g0017707 Lotus japonicus HOM05D006622 ORTHO05D007939 3.7e-39 165.6 278 39.6
QL09p034510 Quercus lobata HOM05D006622 ORTHO05D007939 4.8e-39 165.2 278 41.4
Potri.002G083300 Populus trichocarpa HOM05D006622 ORTHO05D007939 6.2e-39 164.9 275 41.8
TPR.G21062 Trifolium pratense HOM05D006622 ORTHO05D007939 1.1e-38 164.1 275 40.4
COL.COLO4_20860 Corchorus olitorius HOM05D006622 ORTHO05D007939 1.8e-38 163.3 288 40.3
Thhalv10008385m.g Eutrema salsugineum HOM05D006622 ORTHO05D007939 3.1e-38 162.5 279 40.5
THA.LOC104800197 Tarenaya hassleriana HOM05D006622 ORTHO05D007939 3.1e-38 162.5 275 41.8
SGA_v2.0_scaffold24G10458 Striga asiatica HOM05D006622 ORTHO05D007939 4.0e-38 162.2 277 41.2
RcHm_v2.0_Chr6g0295871 Rosa chinensis HOM05D006622 ORTHO05D007939 5.3e-38 161.8 267 42.3
GSVIVG01008863001 Vitis vinifera HOM05D006622 ORTHO05D007939 5.3e-38 161.8 266 42.5
Duzib093G0047 Durio zibethinus HOM05D006622 ORTHO05D007939 6.9e-38 161.4 264 42.4
Potri.005G178200 Populus trichocarpa HOM05D006622 ORTHO05D007939 1.2e-37 160.6 276 42.0
Nn5g28301 Nelumbo nucifera HOM05D006622 ORTHO05D007939 2.0e-37 159.8 190 55.8
Atru.chr13.1464 Acer truncatum HOM05D006622 ORTHO05D007939 2.6e-37 159.5 267 41.2
FAN15G0029 Fragaria x ananassa HOM05D006622 ORTHO05D007939 2.6e-37 159.5 267 41.2
ATR0584G160 Amborella trichopoda HOM05D006622 ORTHO05D007939 3.4e-37 159.1 272 40.4
Aa31LG7G5770 Aethionema arabicum HOM05D006622 ORTHO05D007939 4.5e-37 158.7 279 39.4
Lalb_Chr11g0065931 Lupinus albus HOM05D006622 ORTHO05D007939 4.5e-37 158.7 282 38.7
Hund26807 Selenicereus undatus HOM05D006622 ORTHO05D007939 4.5e-37 158.7 270 40.7
FvH4_2g26990 Fragaria vesca HOM05D006622 ORTHO05D007939 5.8e-37 158.3 267 41.6
FAN24G2914 Fragaria x ananassa HOM05D006622 ORTHO05D007939 5.8e-37 158.3 267 41.6
Migut.N03281 Erythranthe guttata HOM05D006622 ORTHO05D007939 7.6e-37 157.9 268 40.3
Atru.chr13.1486 Acer truncatum HOM05D006622 ORTHO05D007939 1.3e-36 157.1 265 41.1
CARHR022170 Cardamine hirsuta HOM05D006622 ORTHO05D007939 1.3e-36 157.1 277 39.4
PSO017G0487 Papaver somniferum HOM05D006622 ORTHO05D007939 4.9e-36 155.2 275 40.7
Carub.0001s2125 Capsella rubella HOM05D006622 ORTHO05D007939 6.5e-36 154.8 279 38.7
DCAR_003552 Daucus carota HOM05D006622 ORTHO05D007939 6.5e-36 154.8 266 40.2
C05p20800 Brassica napus HOM05D006622 ORTHO05D007939 8.4e-36 154.5 277 38.6
BcaB07g32178 Brassica carinata HOM05D006622 ORTHO05D007939 1.4e-35 153.7 277 39.0
AL1G34990 Arabidopsis lyrata HOM05D006622 ORTHO05D007939 1.9e-35 153.3 278 38.5
Zm00001eb146520 Zea mays HOM05D006622 ORTHO05D007939 4.2e-35 152.1 276 39.5
Manes.18G077500 Manihot esculenta HOM05D006622 ORTHO05D007939 5.5e-35 151.8 275 41.1
AT1G21790 Arabidopsis thaliana HOM05D006622 ORTHO05D007939 7.1e-35 151.4 275 39.3
Phvul.009G125300 Phaseolus vulgaris HOM05D006622 ORTHO05D007939 7.1e-35 151.4 275 38.9
Medtr3g088060 Medicago truncatula HOM05D006622 ORTHO05D007939 1.2e-34 150.6 280 37.1
VMungo1309G2133 Vigna mungo HOM05D006622 ORTHO05D007939 1.2e-34 150.6 275 38.5
EL10Ac1g01019 Beta vulgaris HOM05D006622 ORTHO05D007939 2.1e-34 149.8 273 39.2
CDE08G0135 Ceratophyllum demersum HOM05D006622 ORTHO05D007939 2.7e-34 149.4 218 46.3
PGSC0003DMG400007898 Solanum tuberosum HOM05D006622 ORTHO05D007939 3.5e-34 149.1 116 70.7
BolC5t30779H Brassica oleracea HOM05D006622 ORTHO05D007939 4.6e-34 148.7 277 37.9
PSO478G0228 Papaver somniferum HOM05D006622 ORTHO05D007939 4.6e-34 148.7 275 40.7
Zm00001eb366620 Zea mays HOM05D006622 ORTHO05D007939 4.6e-34 148.7 266 38.7
HPP92_013761 Vanilla planifolia HOM05D006622 ORTHO05D007939 6.0e-34 148.3 275 38.2
BcaC05g26102 Brassica carinata HOM05D006622 ORTHO05D007939 7.9e-34 147.9 277 37.9
Os01g0869600 Oryza sativa ssp. japonica HOM05D006622 ORTHO05D007939 7.9e-34 147.9 266 39.1
MELO3C010612.2 Cucumis melo HOM05D006622 ORTHO05D007939 1.0e-33 147.5 277 39.7
A06p17900 Brassica napus HOM05D006622 ORTHO05D007939 3.9e-33 145.6 277 37.2
BraA06t24880Z Brassica rapa HOM05D006622 ORTHO05D007939 3.9e-33 145.6 277 37.2
Actinidia03468 Actinidia chinensis HOM05D006622 ORTHO05D007939 6.7e-33 144.8 182 52.2
arahy.Tifrunner.gnm1.ann1.29UIE3 Arachis hypogaea HOM05D006622 ORTHO05D007939 1.1e-32 144.1 279 37.3
CsaV3_6G034460 Cucumis sativus L. HOM05D006622 ORTHO05D007939 1.5e-32 143.7 276 39.1
Glyma.06G113400 Glycine max HOM05D006622 ORTHO05D007939 2.5e-32 142.9 278 36.7
arahy.Tifrunner.gnm1.ann1.9BP3HC Arachis hypogaea HOM05D006622 ORTHO05D007939 3.3e-32 142.5 279 36.9
Haze_00437 Corylus avellana HOM05D006622 ORTHO05D007939 2.1e-31 139.8 343 34.1
Oeu040413.1 Olea europaea HOM05D006622 ORTHO05D007939 2.1e-31 139.8 121 62.0
Glyma.04G249500 Glycine max HOM05D006622 ORTHO05D007939 1.2e-29 134.0 279 36.2
Cpa.g.sc64.93 Carica papaya HOM05D006622 ORTHO05D007939 2.5e-27 126.3 116 63.8
CDE06G0548 Ceratophyllum demersum HOM05D006622 ORTHO05D007939 5.1e-25 118.6 114 59.6
Sc15g0002770 Simmondsia chinensis HOM05D006622 ORTHO05D007939 5.1e-25 118.6 279 34.1
ClCG08G005670 Citrullus lanatus HOM05D006622 ORTHO05D007939 7.4e-24 114.8 115 59.1
Psat5g087320 Pisum sativum HOM05D006622 ORTHO05D007939 1.8e-22 110.2 118 54.2
Lj7C341T13 Lonicera japonica HOM05D006622 ORTHO05D007939 1.8e-17 93.6 74 63.5
AUR62014332 Chenopodium quinoa HOM05D006622 ORTHO05D007939 3.0e-17 92.8 275 31.3
Lj7C341T14 Lonicera japonica HOM05D006622 ORTHO05D007939 3.3e-16 89.4 72 69.4
AUR62019075 Chenopodium quinoa HOM05D006622 ORTHO05D007939 1.4e-14 84.0 202 32.7
Prupe.1G512700 Prunus persica HOM05D006622 ORTHO05D007939 2.4e-14 83.2 69 62.3
Mapoly0055s0084 Marchantia polymorpha HOM05D006622 ORTHO05D007939 6.9e-14 81.6 275 26.5
FAN20G1317 Fragaria x ananassa HOM05D006622 ORTHO05D007939 1.2e-13 80.9 62 64.5
Sed0026599 Sechium edule HOM05D006622 ORTHO05D007939 5.9e-13 78.6 71 62.0
HPP92_013753 Vanilla planifolia HOM05D006622 ORTHO05D007939 1.6e-10 70.5 73 56.2
MD08G1162300 Malus domestica HOM05D006622 ORTHO05D007939 2.7e-10 69.7 60 58.3
Pp3c12_11900 Physcomitrium patens HOM05D006622 ORTHO05D007939 1.4e-09 67.4 280 26.8
SMO351G0129 Selaginella moellendorffii HOM05D006622 ORTHO05D007939 3.7e-07 59.3 273 24.9
AagrBONN_evm.TU.Sc2ySwM_117.1000 Anthoceros agrestis HOM05D006622 ORTHO05D007939 4.8e-07 58.9 125 33.6
Aa31LG4G7660 Aethionema arabicum HOM05D006622 ORTHO05D007939 3.1e-06 56.2 58 58.6
unitig_748.g7104 Utricularia gibba HOM05D006622 ORTHO05D007939 5.3e-06 55.5 71 46.5


User provided reference genes

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