Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000952g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.0e-121 437.2 234 100.0
Nitab4.5_0000573g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.2e-57 224.6 236 61.4
Nitab4.5_0000096g0340 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.3e-54 217.2 198 65.7
Nitab4.5_0006324g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.5e-47 193.7 189 64.6
Nitab4.5_0000194g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.4e-43 180.6 170 64.7
Nitab4.5_0000500g0250 Nicotiana tabacum HOM05D000024 ORTHO05D285919 1.1e-37 161.0 119 74.8
Nitab4.5_0000023g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.2e-37 158.3 312 39.4
Nitab4.5_0005500g0060 Nicotiana tabacum HOM05D000024 ORTHO05D284227 2.7e-28 129.8 149 55.7
Nitab4.5_0000164g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.0e-28 128.3 212 45.8
Nitab4.5_0003374g0100 Nicotiana tabacum HOM05D000024 ORTHO05D283255 1.6e-20 104.0 139 50.4
Nitab4.5_0001307g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.4e-18 96.3 288 34.7
Nitab4.5_0008160g0030 Nicotiana tabacum HOM05D000024 ORTHO05D282591 3.7e-17 92.8 175 39.4
Nitab4.5_0000457g0440 Nicotiana tabacum HOM05D011002 ORTHO05D000007 4.1e-16 89.4 279 29.4
Nitab4.5_0005284g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.7e-15 86.7 227 36.1
Nitab4.5_0000098g0120 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.7e-15 85.1 227 30.8
Nitab4.5_0007450g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.1e-13 81.3 257 33.9
Nitab4.5_0000961g0150 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.5e-13 80.1 42 90.5
Nitab4.5_0000404g0050 Nicotiana tabacum HOM05D000024 ORTHO05D283760 3.2e-13 79.7 50 78.0
Nitab4.5_0002289g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.5e-13 79.0 231 33.3
Nitab4.5_0000715g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.2e-12 77.8 270 30.7
Nitab4.5_0000575g0280 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.6e-12 77.4 42 88.1
Nitab4.5_0003374g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.6e-12 77.4 42 88.1
Nitab4.5_0002164g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.1e-12 77.0 254 31.5
Nitab4.5_0007204g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.1e-12 77.0 41 87.8
Nitab4.5_0001130g0240 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.6e-12 76.3 328 29.6
Nitab4.5_0008745g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.1e-12 75.5 42 81.0
Nitab4.5_0004658g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.0e-12 75.1 42 83.3
Nitab4.5_0000370g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.0e-11 74.7 42 83.3
Nitab4.5_0000465g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.4e-11 74.3 42 83.3
Nitab4.5_0002966g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.4e-11 74.3 42 81.0
Nitab4.5_0005500g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.0e-11 73.2 121 44.6
Nitab4.5_0007582g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.0e-11 73.2 88 45.5
Nitab4.5_0002591g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.8e-11 72.0 43 76.7
Nitab4.5_0009312g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.8e-11 72.0 42 83.3
Nitab4.5_0001676g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.8e-11 71.6 287 28.9
Nitab4.5_0003516g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.8e-11 71.6 42 83.3
Nitab4.5_0006719g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.8e-11 71.6 41 80.5
Nitab4.5_0003241g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.2e-10 71.2 42 78.6
Nitab4.5_0003397g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.2e-10 71.2 42 78.6
Nitab4.5_0000063g0330 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.4e-10 69.3 41 78.0
Nitab4.5_0005284g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.7e-10 68.9 122 39.3
Nitab4.5_0008161g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.7e-10 68.9 40 82.5
Nitab4.5_0003500g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.4e-08 64.3 147 35.4
Nitab4.5_0001544g0120 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.1e-08 63.2 36 80.6
Nitab4.5_0002061g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.1e-08 63.2 160 33.1
Nitab4.5_0011088g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.1e-08 63.2 41 70.7
Nitab4.5_0009471g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.1e-08 62.8 43 67.4
Nitab4.5_0001987g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.2e-07 61.2 42 69.0
Nitab4.5_0002924g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.2e-07 61.2 82 45.1
Nitab4.5_0001375g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.6e-07 60.8 240 31.2
Nitab4.5_0001375g0030 Nicotiana tabacum HOM05D000024 ORTHO05D285087 2.0e-07 60.5 34 76.5
Nitab4.5_0003397g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000006 2.0e-07 60.5 155 32.9
Nitab4.5_0003260g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.5e-07 59.7 92 42.4
Nitab4.5_0000164g0060 Nicotiana tabacum HOM05D000024 ORTHO05D283039 4.5e-07 59.3 34 82.4
Nitab4.5_0000173g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.9e-07 58.9 42 61.9
Nitab4.5_0000261g0120 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.9e-07 58.9 41 68.3
Nitab4.5_0001286g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.9e-07 58.9 42 61.9
Nitab4.5_0025326g0010 Nicotiana tabacum HOM05D012219 ORTHO05D000007 5.9e-07 58.9 196 28.1
Nitab4.5_0006711g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.3e-06 57.8 309 25.6
Nitab4.5_0001757g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.7e-06 57.4 42 64.3
Nitab4.5_0000106g0450 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.3e-06 57.0 114 39.5
Nitab4.5_0006194g0020 Nicotiana tabacum HOM05D012219 ORTHO05D000007 2.3e-06 57.0 235 31.5
Nitab4.5_0003102g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.9e-06 56.6 42 61.9
Peaxi162Scf00460g00041 Petunia axillaris HOM05D000024 ORTHO05D000007 2.9e-06 56.6 42 64.3
Nitab4.5_0004101g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.8e-06 56.2 40 62.5
Nitab4.5_0015178g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.8e-06 56.2 35 71.4
Nitab4.5_0002177g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.6e-06 55.1 42 59.5


User provided reference genes

Program Settings