Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000948g0130 Nicotiana tabacum HOM05D007992 ORTHO05D010086 3.6e-31 137.5 65 100.0
Nitab4.5_0002596g0010 Nicotiana tabacum HOM05D007992 ORTHO05D010086 1.1e-30 136.0 65 98.5
Peaxi162Scf00011g00937 Petunia axillaris HOM05D007992 ORTHO05D010086 1.2e-29 132.5 65 95.4
CAN.G798.45 Capsicum annuum HOM05D007992 ORTHO05D010086 9.9e-29 129.4 65 93.8
Oeu045939.1 Olea europaea HOM05D007992 ORTHO05D010086 3.5e-26 120.9 63 87.3
PGR142G0328 Punica granatum HOM05D007992 ORTHO05D010086 7.9e-26 119.8 63 87.3
Migut.B00791 Erythranthe guttata HOM05D007992 ORTHO05D010086 1.3e-25 119.0 63 82.5
Manes.10G120300 Manihot esculenta HOM05D007992 ORTHO05D010086 2.5e-24 114.8 63 81.0
SalBow7G0224 Salvia bowleyana HOM05D007992 ORTHO05D010086 3.3e-24 114.4 71 76.1
CiPaw.05G051500 Carya illinoinensis HOM05D007992 ORTHO05D010086 1.6e-23 112.1 63 79.4
Cc02_g22280 Coffea canephora HOM05D007992 ORTHO05D010086 2.1e-23 111.7 63 79.4
Sed0016814 Sechium edule HOM05D007992 ORTHO05D010086 2.1e-23 111.7 63 76.2
Eucgr.I02752 Eucalyptus grandis HOM05D007992 ORTHO05D010086 3.7e-23 110.9 63 77.8
THA.LOC104820254 Tarenaya hassleriana HOM05D007992 ORTHO05D010086 4.8e-23 110.5 63 77.8
MELO3C031671.2 Cucumis melo HOM05D007992 ORTHO05D010086 6.2e-23 110.2 64 76.6
QL02p099856 Quercus lobata HOM05D007992 ORTHO05D010086 1.4e-22 109.0 63 77.8
QL93p0310_0002 Quercus lobata HOM05D007992 ORTHO05D010086 1.4e-22 109.0 63 77.8
arahy.Tifrunner.gnm1.ann1.5LAZ71 Arachis hypogaea HOM05D007992 ORTHO05D010086 1.8e-22 108.6 63 77.8
arahy.Tifrunner.gnm1.ann1.UKT1PL Arachis hypogaea HOM05D007992 ORTHO05D010086 1.8e-22 108.6 63 77.8
Lj4g0012187 Lotus japonicus HOM05D007992 ORTHO05D010086 1.8e-22 108.6 63 77.8
Potri.003G009800 Populus trichocarpa HOM05D007992 ORTHO05D010086 1.8e-22 108.6 63 77.8
CsaV3_3G019300 Cucumis sativus L. HOM05D007992 ORTHO05D010086 2.4e-22 108.2 64 73.4
PSO782G2589 Papaver somniferum HOM05D007992 ORTHO05D010086 3.1e-22 107.8 58 84.5
HanXRQChr07g0187511 Helianthus annuus HOM05D007992 ORTHO05D010086 4.0e-22 107.5 63 74.6
Zm00001eb138500 Zea mays HOM05D007992 ORTHO05D010086 4.0e-22 107.5 63 76.2
Lsat_1_v5_gn_7_79260 Lactuca sativa HOM05D007992 ORTHO05D010086 6.9e-22 106.7 63 76.2
AT1G09794 Arabidopsis thaliana HOM05D007992 ORTHO05D010086 2.6e-21 104.8 63 74.6
Carub.0001s0914 Capsella rubella HOM05D007992 ORTHO05D010086 2.6e-21 104.8 63 74.6
CARHR009770 Cardamine hirsuta HOM05D007992 ORTHO05D010086 2.6e-21 104.8 63 74.6
Thhalv10009288m.g Eutrema salsugineum HOM05D007992 ORTHO05D010086 2.6e-21 104.8 63 74.6
C05p07870 Brassica napus HOM05D007992 ORTHO05D010086 3.4e-21 104.4 63 76.2
BolC5t29538H Brassica oleracea HOM05D007992 ORTHO05D010086 3.4e-21 104.4 63 76.2
Aa31LG1G5180 Aethionema arabicum HOM05D007992 ORTHO05D010086 7.6e-21 103.2 63 74.6
Os12g0182600 Oryza sativa ssp. japonica HOM05D007992 ORTHO05D010086 7.6e-21 103.2 63 73.0
A06p06460 Brassica napus HOM05D007992 ORTHO05D010086 1.0e-20 102.8 63 74.6
BraA06t23857Z Brassica rapa HOM05D007992 ORTHO05D010086 1.0e-20 102.8 63 74.6
TWI59G0747 Tripterygium wilfordii HOM05D007992 ORTHO05D010086 1.3e-20 102.4 63 73.0
Medtr4g134900 Medicago truncatula HOM05D007992 ORTHO05D010086 1.7e-20 102.1 63 73.0
Glyma.17G000900 Glycine max HOM05D007992 ORTHO05D010086 2.2e-20 101.7 59 76.3
MD15G1432800 Malus domestica HOM05D007992 ORTHO05D010086 2.2e-20 101.7 61 77.0
Phvul.003G074700 Phaseolus vulgaris HOM05D007992 ORTHO05D010086 2.2e-20 101.7 63 73.0
CANSAT54G2040 Cannabis sativa HOM05D007992 ORTHO05D010086 2.9e-20 101.3 61 73.8
EL10Ac1g00780 Beta vulgaris HOM05D007992 ORTHO05D010086 3.8e-20 100.9 64 73.4
vmacro01727 Vaccinium macrocarpon HOM05D007992 ORTHO05D010086 4.9e-20 100.5 73 67.1
GSVIVG01023280001 Vitis vinifera HOM05D007992 ORTHO05D010086 4.9e-20 100.5 63 73.0
CSS0028556 Camellia sinensis var. sinensis HOM05D007992 ORTHO05D010086 1.1e-19 99.4 63 73.0
AUR62023424 Chenopodium quinoa HOM05D007992 ORTHO05D010086 1.9e-19 98.6 60 73.3
DCAR_025353 Daucus carota HOM05D007992 ORTHO05D010086 3.2e-19 97.8 56 75.0
Nn5g27747 Nelumbo nucifera HOM05D007992 ORTHO05D010086 1.3e-17 92.4 60 73.3
FAN04G0058 Fragaria x ananassa HOM05D007992 ORTHO05D010086 1.8e-17 92.0 53 75.5
FAN18G3190 Fragaria x ananassa HOM05D007992 ORTHO05D010086 2.3e-17 91.7 53 75.5
Prupe.1G576700 Prunus persica HOM05D007992 ORTHO05D010086 2.3e-17 91.7 61 70.5
RcHm_v2.0_Chr7g0220841 Rosa chinensis HOM05D007992 ORTHO05D010086 2.3e-17 91.7 57 71.9
AagrBONN_evm.TU.Sc2ySwM_228.5013 Anthoceros agrestis HOM05D007992 ORTHO05D010086 1.5e-16 89.0 61 60.7
Aqoxy6G00119 Aquilegia oxysepala HOM05D007992 ORTHO05D010086 2.5e-16 88.2 61 68.9
Pp3c6_8240 Physcomitrium patens HOM05D007992 ORTHO05D010086 8.2e-15 83.2 59 62.7
Sp1g08390 Schrenkiella parvula HOM05D007992 ORTHO05D010086 3.1e-14 81.3 63 63.5
Lalb_Chr13g0304491 Lupinus albus HOM05D007992 ORTHO05D010086 2.6e-13 78.2 53 64.2
CBR_g44919 Chara braunii HOM05D007992 ORTHO05D010086 2.9e-12 74.7 62 53.2
SMO367G0246 Selaginella moellendorffii HOM05D007992 ORTHO05D010086 2.9e-12 74.7 59 49.2
MD08G1240200 Malus domestica HOM05D007992 ORTHO05D010086 6.5e-12 73.6 58 62.1
Gohir.D04G175400 Gossypium hirsutum HOM05D007992 ORTHO05D010086 2.5e-11 71.6 63 58.7
Gorai.012G166700 Gossypium raimondii HOM05D007992 ORTHO05D010086 2.5e-11 71.6 63 58.7
Thecc.02G025300 Theobroma cacao HOM05D007992 ORTHO05D010086 4.2e-11 70.9 63 58.7
Atru.chr6.758 Acer truncatum HOM05D007992 ORTHO05D010086 5.5e-11 70.5 63 57.1
Duzib132G0994 Durio zibethinus HOM05D007992 ORTHO05D010086 5.5e-11 70.5 63 58.7
MBI09_g08443_MAGBIO Magnolia biondii HOM05D007992 ORTHO05D010086 1.2e-10 69.3 64 54.7
Gohir.A04G130200 Gossypium hirsutum HOM05D007992 ORTHO05D010086 2.7e-10 68.2 63 55.6
Actinidia26161 Actinidia chinensis HOM05D000243 ORTHO05D010086 1.0e-09 66.2 44 65.9
Sabra03G0005100 Salix brachista HOM05D007992 ORTHO05D010086 1.1e-08 62.8 35 77.1
unitig_26.g9026 Utricularia gibba HOM05D007992 ORTHO05D010086 5.7e-08 60.5 29 93.1
CDE02G3423 Ceratophyllum demersum HOM05D007992 ORTHO05D010086 1.6e-07 58.9 63 46.0
TPR.G6015 Trifolium pratense HOM05D005420 ORTHO05D006524 1.6e-07 58.9 57 49.1
PGSC0003DMG400024927 Solanum tuberosum HOM05D007992 ORTHO05D010086 2.8e-07 58.2 57 54.4
SGA_v2.0_scaffold272G46362 Striga asiatica HOM05D007992 ORTHO05D010086 1.1e-06 56.2 29 86.2
Migut.B00795 Erythranthe guttata HOM05D007992 ORTHO05D010086 1.8e-06 55.5 29 82.8
Rhsim11G0125500 Rhododendron simsii HOM05D007992 ORTHO05D010086 2.4e-06 55.1 36 63.9
TPR.G17560 Trifolium pratense HOM05D007992 ORTHO05D010086 2.4e-06 55.1 29 82.8


User provided reference genes

Program Settings