Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000947g0070 Nicotiana tabacum HOM05D008075 ORTHO05D010208 0.0e+00 1452.6 738 100.0
Nitab4.5_0005586g0040 Nicotiana tabacum HOM05D008075 ORTHO05D010208 0.0e+00 1332.0 762 90.7
PGSC0003DMG400022727 Solanum tuberosum HOM05D008075 ORTHO05D010208 9.2e-288 993.4 767 72.1
Peaxi162Scf00658g00065 Petunia axillaris HOM05D008075 ORTHO05D010208 5.9e-287 990.7 748 73.3
Solyc08g080000.3 Solanum lycopersicum HOM05D008075 ORTHO05D010208 4.1e-272 941.4 760 69.6
Sopen08g028360 Solanum pennellii HOM05D008075 ORTHO05D010208 4.6e-271 937.9 760 69.6
CAN.G630.6 Capsicum annuum HOM05D008075 ORTHO05D010208 1.1e-259 900.2 688 71.4
Dinv08171 Davidia involucrata HOM05D008075 ORTHO05D010208 1.3e-116 424.9 830 40.0
Oeu011019.1 Olea europaea HOM05D002427 ORTHO05D002818 9.0e-102 375.6 758 39.1
Cc02_g33950 Coffea canephora HOM05D008075 ORTHO05D010208 8.5e-100 369.0 817 37.9
SGA_v2.0_scaffold54G19596 Striga asiatica HOM05D008075 ORTHO05D010208 1.3e-95 355.1 757 37.8
GSVIVG01022404001 Vitis vinifera HOM05D008075 ORTHO05D010208 1.4e-94 351.7 785 36.7
Rhsim08G0001000 Rhododendron simsii HOM05D008075 ORTHO05D010208 1.1e-86 325.5 813 35.1
CSS0037312 Camellia sinensis var. sinensis HOM05D008075 ORTHO05D010208 1.8e-81 308.1 755 34.8
SalBow1G7185 Salvia bowleyana HOM05D008075 ORTHO05D010208 2.8e-79 300.8 755 34.8
TAR376G0152 Trochodendron aralioides HOM05D008075 ORTHO05D010208 3.5e-77 293.9 479 43.8
Potri.004G140000 Populus trichocarpa HOM05D008075 ORTHO05D010208 5.0e-76 290.0 803 32.5
Migut.H00807 Erythranthe guttata HOM05D008075 ORTHO05D010208 8.2e-71 272.7 758 34.0
Sabra04G0092100 Salix brachista HOM05D008075 ORTHO05D010208 2.0e-69 268.1 808 31.1
CiPaw.03G254600 Carya illinoinensis HOM05D008075 ORTHO05D010208 2.5e-67 261.2 509 40.7
TWI75G0788 Tripterygium wilfordii HOM05D008075 ORTHO05D010208 5.2e-65 253.4 782 32.2
QL10p040186 Quercus lobata HOM05D008075 ORTHO05D010208 1.2e-61 242.3 891 30.1
Ciclev10024878m.g Citrus clementina HOM05D008075 ORTHO05D010208 1.0e-60 239.2 495 38.4
Nn1g08564 Nelumbo nucifera HOM05D008075 ORTHO05D010208 2.1e-58 231.5 637 35.6
MBI03_g11141_MAGBIO Magnolia biondii HOM05D008075 ORTHO05D010208 4.0e-57 227.3 259 55.2
Manes.12G084200 Manihot esculenta HOM05D008075 ORTHO05D010208 4.4e-56 223.8 774 30.7
PSO782G2813 Papaver somniferum HOM05D008075 ORTHO05D010208 1.1e-54 219.2 790 30.1
ECA233G5565 Erigeron canadensis HOM05D008075 ORTHO05D010208 5.4e-54 216.9 754 32.4
Nn5g27987 Nelumbo nucifera HOM05D008075 ORTHO05D010208 3.5e-53 214.2 222 57.2
Aqoxy2G00609 Aquilegia oxysepala HOM05D008075 ORTHO05D010208 1.3e-52 212.2 219 58.0
PSO170G3563 Papaver somniferum HOM05D008075 ORTHO05D010208 5.0e-52 210.3 798 30.5
Medtr8g095160 Medicago truncatula HOM05D008075 ORTHO05D010208 1.9e-51 208.4 212 55.7
Glyma.05G197100 Glycine max HOM05D008075 ORTHO05D010208 2.5e-51 208.0 464 36.2
Glyma.08G004500 Glycine max HOM05D008075 ORTHO05D010208 2.5e-51 208.0 861 29.2
HPP92_002184 Vanilla planifolia HOM05D008075 ORTHO05D010208 2.5e-51 208.0 213 55.4
TPR.G33422 Trifolium pratense HOM05D008075 ORTHO05D010208 2.8e-50 204.5 214 54.2
THA.LOC104819473 Tarenaya hassleriana HOM05D008075 ORTHO05D010208 6.1e-50 203.4 389 40.6
Lsat_1_v5_gn_5_69300 Lactuca sativa HOM05D008075 ORTHO05D010208 3.0e-49 201.1 216 55.6
HanXRQChr15g0468991 Helianthus annuus HOM05D008075 ORTHO05D010208 4.0e-49 200.7 235 51.9
arahy.Tifrunner.gnm1.ann1.F3CBX5 Arachis hypogaea HOM05D008075 ORTHO05D010208 1.2e-48 199.1 257 49.4
Phvul.002G277500 Phaseolus vulgaris HOM05D008075 ORTHO05D010208 1.5e-48 198.7 212 51.9
Psat7g041720 Pisum sativum HOM05D008075 ORTHO05D010208 3.4e-48 197.6 828 29.2
VMungo0251G2353 Vigna mungo HOM05D008075 ORTHO05D010208 2.2e-47 194.9 594 31.3
Lj4g0013275 Lotus japonicus HOM05D008075 ORTHO05D010208 2.9e-47 194.5 467 37.3
Sc09g0004370 Simmondsia chinensis HOM05D008075 ORTHO05D010208 6.4e-47 193.4 226 52.2
Zm00001eb054280 Zea mays HOM05D008075 ORTHO05D010208 1.4e-46 192.2 273 47.3
Os03g0703300 Oryza sativa ssp. japonica HOM05D008075 ORTHO05D010208 2.7e-45 188.0 353 39.4
arahy.Tifrunner.gnm1.ann1.BIR6X5 Arachis hypogaea HOM05D008075 ORTHO05D010208 6.0e-45 186.8 274 46.0
ATR0171G010 Amborella trichopoda HOM05D008075 ORTHO05D010208 3.0e-44 184.5 217 52.1
EL10Ac4g08956 Beta vulgaris HOM05D008075 ORTHO05D010208 4.3e-43 180.6 804 28.0
AUR62039042 Chenopodium quinoa HOM05D008075 ORTHO05D010208 5.6e-43 180.3 809 28.2
Ca_17596_v3 Cicer arietinum L. HOM05D000484 ORTHO05D010208 4.0e-41 174.1 444 35.1
Hund06889 Selenicereus undatus HOM05D008075 ORTHO05D010208 4.0e-41 174.1 215 50.2
Ah.06g191710 Amaranthus hybridus HOM05D008075 ORTHO05D010208 8.9e-41 172.9 821 29.1
MSTRG.23496 Avicennia marina HOM05D008075 ORTHO05D010208 2.6e-40 171.4 606 31.0
Lalb_Chr12g0202841 Lupinus albus HOM05D008075 ORTHO05D010208 9.2e-38 162.9 558 28.3
AUR62004796 Chenopodium quinoa HOM05D008075 ORTHO05D010208 1.2e-32 146.0 840 27.1
SMO266G0073 Selaginella moellendorffii HOM05D008075 ORTHO05D010208 1.9e-30 138.7 181 46.4
SEGI_31365 Sequoiadendron giganteum HOM05D008075 ORTHO05D010208 1.2e-26 125.9 214 39.7
Mapoly0089s0038 Marchantia polymorpha HOM05D008075 ORTHO05D010208 4.0e-25 120.9 165 40.6
Pp3c16_21630 Physcomitrium patens HOM05D008075 ORTHO05D010208 1.0e-20 106.3 190 35.8
Pp3c6_3110 Physcomitrium patens HOM05D008075 ORTHO05D010208 1.5e-19 102.4 177 36.2
Pp3c6_900 Physcomitrium patens HOM05D008075 ORTHO05D010208 5.6e-19 100.5 178 36.0
Pp3c6_920 Physcomitrium patens HOM05D008075 ORTHO05D010208 5.6e-19 100.5 178 36.0
Nn5g27981 Nelumbo nucifera HOM05D008075 ORTHO05D010208 3.1e-17 94.7 103 55.3
CBR_g31168 Chara braunii HOM05D008075 ORTHO05D010208 5.3e-09 67.4 141 31.9
VMungo0251G2339 Vigna mungo HOM05D008075 ORTHO05D010208 5.3e-09 67.4 454 26.4
Nn5g28099 Nelumbo nucifera HOM05D004492 ORTHO05D005602 7.6e-08 63.5 43 65.1
AagrBONN_evm.TU.Sc2ySwM_362.1056 Anthoceros agrestis HOM05D008075 ORTHO05D010208 2.2e-07 62.0 129 34.1


User provided reference genes

Program Settings