Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000944g0110 Nicotiana tabacum HOM05D006361 ORTHO05D007824 3.4e-181 638.3 335 100.0
Nitab4.5_0003889g0010 Nicotiana tabacum HOM05D006361 ORTHO05D007824 1.3e-156 556.6 336 90.2
Sopen01g014340 Solanum pennellii HOM05D006361 ORTHO05D007824 2.7e-138 495.7 317 83.6
PGSC0003DMG400030230 Solanum tuberosum HOM05D006361 ORTHO05D007824 4.6e-138 495.0 335 80.3
Sopen01g010510 Solanum pennellii HOM05D006361 ORTHO05D007824 1.5e-136 490.0 318 83.0
Peaxi162Scf00705g00017 Petunia axillaris HOM05D006361 ORTHO05D007824 9.7e-136 487.3 312 82.7
CAN.G282.86 Capsicum annuum HOM05D006361 ORTHO05D007824 2.8e-135 485.7 336 78.3
GSVIVG01000604001 Vitis vinifera HOM05D006361 ORTHO05D007824 1.2e-90 337.4 331 58.9
Cfa015091 Carpinus fangiana HOM05D006361 ORTHO05D007824 2.1e-90 336.7 350 56.0
TAR371G0655 Trochodendron aralioides HOM05D006361 ORTHO05D007824 1.0e-89 334.3 333 56.8
Lj6A727G89 Lonicera japonica HOM05D006361 ORTHO05D007824 8.9e-89 331.3 322 59.0
TWI74G1113 Tripterygium wilfordii HOM05D006361 ORTHO05D007824 7.0e-86 321.6 356 53.4
Cc11_g04970 Coffea canephora HOM05D006361 ORTHO05D007824 1.2e-85 320.9 327 57.5
Oeu005683.1 Olea europaea HOM05D006361 ORTHO05D007824 1.6e-85 320.5 312 59.6
Hma1.2p1_0068F.1_g037170 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 2.7e-85 319.7 364 54.1
CSS0002219 Camellia sinensis var. sinensis HOM05D006361 ORTHO05D007824 5.9e-85 318.5 341 55.4
Rhsim04G0169300 Rhododendron simsii HOM05D006361 ORTHO05D007824 5.9e-85 318.5 321 58.6
HanXRQChr08g0224371 Helianthus annuus HOM05D006361 ORTHO05D007824 7.8e-85 318.2 326 59.5
CSS0021447 Camellia sinensis var. sinensis HOM05D006361 ORTHO05D007824 1.0e-84 317.8 343 55.7
Ciclev10005401m.g Citrus clementina HOM05D006361 ORTHO05D007824 1.3e-84 317.4 323 57.0
Nn4g24771 Nelumbo nucifera HOM05D006361 ORTHO05D007824 1.7e-84 317.0 332 55.4
Glyma.20G108700 Glycine max HOM05D006361 ORTHO05D007824 3.9e-84 315.8 313 57.5
QL03p040836 Quercus lobata HOM05D006361 ORTHO05D007824 6.6e-84 315.1 332 56.0
CiPaw.05G161000 Carya illinoinensis HOM05D006361 ORTHO05D007824 1.5e-83 313.9 356 53.1
Sed0017139 Sechium edule HOM05D006361 ORTHO05D007824 1.5e-83 313.9 321 57.3
Potri.010G099500 Populus trichocarpa HOM05D006361 ORTHO05D007824 1.9e-83 313.5 335 53.1
Gohir.A03G114200 Gossypium hirsutum HOM05D006361 ORTHO05D007824 6.2e-82 308.5 350 51.7
Duzib251G0777 Durio zibethinus HOM05D006361 ORTHO05D007824 8.0e-82 308.1 356 52.2
Thecc.02G299900 Theobroma cacao HOM05D006361 ORTHO05D007824 8.0e-82 308.1 345 53.0
arahy.Tifrunner.gnm1.ann1.L5ZJMR Arachis hypogaea HOM05D006361 ORTHO05D007824 1.4e-81 307.4 343 53.1
Carub.0001s0863 Capsella rubella HOM05D006361 ORTHO05D007824 1.4e-81 307.4 355 50.1
Gorai.005G155100 Gossypium raimondii HOM05D006361 ORTHO05D007824 1.4e-81 307.4 346 52.0
arahy.Tifrunner.gnm1.ann1.DP1KMD Arachis hypogaea HOM05D006361 ORTHO05D007824 2.3e-81 306.6 343 53.4
DCAR_030322 Daucus carota HOM05D006361 ORTHO05D007824 4.0e-81 305.8 334 53.9
Gohir.D02G138700 Gossypium hirsutum HOM05D006361 ORTHO05D007824 4.0e-81 305.8 346 51.7
CARHR009260 Cardamine hirsuta HOM05D006361 ORTHO05D007824 5.2e-81 305.4 326 51.5
Lalb_Chr02g0143351 Lupinus albus HOM05D006361 ORTHO05D007824 5.8e-80 302.0 322 56.2
FvH4_4g35990 Fragaria vesca HOM05D006361 ORTHO05D007824 7.5e-80 301.6 321 58.6
PSO063G1793 Papaver somniferum HOM05D006361 ORTHO05D007824 7.5e-80 301.6 356 51.4
PGR142G2205 Punica granatum HOM05D006361 ORTHO05D007824 7.5e-80 301.6 350 52.9
Manes.15G141000 Manihot esculenta HOM05D006361 ORTHO05D007824 9.8e-80 301.2 351 52.1
A08p34700 Brassica napus HOM05D006361 ORTHO05D007824 1.3e-79 300.8 323 52.0
Cpa.g.sc2.83 Carica papaya HOM05D006361 ORTHO05D007824 1.3e-79 300.8 360 51.7
Prupe.1G340600 Prunus persica HOM05D006361 ORTHO05D007824 1.3e-79 300.8 336 55.4
BcaC07g38489 Brassica carinata HOM05D006361 ORTHO05D007824 1.7e-79 300.4 340 50.6
C08p12590 Brassica napus HOM05D006361 ORTHO05D007824 1.7e-79 300.4 340 50.6
AT1G09290 Arabidopsis thaliana HOM05D006361 ORTHO05D007824 2.2e-79 300.1 353 51.0
FAN12G2025 Fragaria x ananassa HOM05D006361 ORTHO05D007824 2.9e-79 299.7 321 58.3
BraA08t35382Z Brassica rapa HOM05D006361 ORTHO05D007824 4.9e-79 298.9 350 49.7
Aqoxy3G04165 Aquilegia oxysepala HOM05D006361 ORTHO05D007824 6.4e-79 298.5 311 54.7
Dinv06050 Davidia involucrata HOM05D006361 ORTHO05D007824 6.4e-79 298.5 334 54.8
AL1G19780 Arabidopsis lyrata HOM05D006361 ORTHO05D007824 1.1e-78 297.7 352 50.3
ClCG11G000690 Citrullus lanatus HOM05D006361 ORTHO05D007824 1.1e-78 297.7 319 57.1
FAN22G0651 Fragaria x ananassa HOM05D006361 ORTHO05D007824 1.1e-78 297.7 318 57.2
BcaB03g13282 Brassica carinata HOM05D006361 ORTHO05D007824 1.4e-78 297.4 352 49.4
FAN17G1000 Fragaria x ananassa HOM05D006361 ORTHO05D007824 1.4e-78 297.4 318 56.3
arahy.Tifrunner.gnm1.ann1.D0LIF0 Arachis hypogaea HOM05D006361 ORTHO05D007824 3.2e-78 296.2 338 52.4
BolC8t48897H Brassica oleracea HOM05D006361 ORTHO05D007824 3.2e-78 296.2 356 48.6
Sabra10G0072200 Salix brachista HOM05D006361 ORTHO05D007824 9.2e-78 294.7 364 48.9
Eucgr.G02045 Eucalyptus grandis HOM05D006361 ORTHO05D007824 1.6e-77 293.9 334 52.1
AUR62003478 Chenopodium quinoa HOM05D006361 ORTHO05D007824 2.0e-77 293.5 309 55.0
ECA233G5480 Erigeron canadensis HOM05D006361 ORTHO05D007824 3.5e-77 292.7 321 54.2
FAN07G0576 Fragaria x ananassa HOM05D006361 ORTHO05D007824 3.5e-77 292.7 318 57.9
HPP92_007296 Vanilla planifolia HOM05D006361 ORTHO05D007824 4.6e-77 292.4 336 51.5
MD16G1010000 Malus domestica HOM05D006361 ORTHO05D007824 6.0e-77 292.0 339 53.4
Thhalv10008047m.g Eutrema salsugineum HOM05D006361 ORTHO05D007824 7.8e-77 291.6 354 48.9
Aa31LG1G5840 Aethionema arabicum HOM05D006361 ORTHO05D007824 1.0e-76 291.2 325 49.2
VMungo0720G0403 Vigna mungo HOM05D006361 ORTHO05D007824 1.7e-76 290.4 327 54.1
Lsat_1_v5_gn_8_33920 Lactuca sativa HOM05D006361 ORTHO05D007824 2.3e-76 290.0 328 54.0
Lj5g0003295 Lotus japonicus HOM05D006361 ORTHO05D007824 5.0e-76 288.9 328 52.1
RcHm_v2.0_Chr4g0445621 Rosa chinensis HOM05D006361 ORTHO05D007824 4.3e-75 285.8 331 54.7
THA.LOC104815221 Tarenaya hassleriana HOM05D006361 ORTHO05D007824 1.2e-74 284.3 352 49.1
TPR.G2489 Trifolium pratense HOM05D006361 ORTHO05D007824 1.6e-74 283.9 293 57.0
Sp1g07900 Schrenkiella parvula HOM05D006361 ORTHO05D007824 2.1e-74 283.5 352 48.0
PSO782G3204 Papaver somniferum HOM05D006361 ORTHO05D007824 6.2e-74 282.0 346 49.4
EL10Ac6g15395 Beta vulgaris HOM05D006361 ORTHO05D007824 1.1e-73 281.2 318 54.1
Psat6g231640 Pisum sativum HOM05D006361 ORTHO05D007824 2.3e-73 280.0 301 56.1
CDE04G0863 Ceratophyllum demersum HOM05D006361 ORTHO05D007824 5.2e-73 278.9 331 51.4
QL03p040440 Quercus lobata HOM05D006361 ORTHO05D007824 1.3e-71 274.2 436 42.4
Medtr1g112360 Medicago truncatula HOM05D006361 ORTHO05D007824 1.1e-70 271.2 293 56.0
Os02g0672400 Oryza sativa ssp. japonica HOM05D006361 ORTHO05D007824 7.1e-70 268.5 319 50.5
Ah.03g147180 Amaranthus hybridus HOM05D006361 ORTHO05D007824 7.8e-69 265.0 327 52.0
MELO3C022554.2 Cucumis melo HOM05D006361 ORTHO05D007824 7.8e-69 265.0 329 51.1
Atru.chr11.1031 Acer truncatum HOM05D006361 ORTHO05D007824 3.0e-68 263.1 337 48.4
ATR0807G049 Amborella trichopoda HOM05D006361 ORTHO05D007824 7.3e-67 258.5 347 45.5
AUR62017787 Chenopodium quinoa HOM05D006361 ORTHO05D007824 8.9e-65 251.5 334 48.2
arahy.Tifrunner.gnm1.ann1.3EIQ25 Arachis hypogaea HOM05D006361 ORTHO05D007824 1.5e-64 250.8 379 45.9
Ca_11202_v3 Cicer arietinum L. HOM05D006361 ORTHO05D007824 8.4e-63 245.0 315 49.2
Phvul.007G020000 Phaseolus vulgaris HOM05D006361 ORTHO05D007824 9.2e-62 241.5 281 50.2
Hma1.2p1_0068F.1_g037190 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 2.1e-61 240.4 250 56.4
COL.COLO4_27543 Corchorus olitorius HOM05D006361 ORTHO05D007824 6.0e-61 238.8 242 55.8
SEGI_09761 Sequoiadendron giganteum HOM05D006361 ORTHO05D007824 4.0e-57 226.1 401 38.9
CsaV3_5G012340 Cucumis sativus L. HOM05D006361 ORTHO05D007824 7.8e-53 211.8 252 52.8
Sc11g0003580 Simmondsia chinensis HOM05D006361 ORTHO05D007824 1.0e-44 184.9 219 52.1
vmacro08586 Vaccinium macrocarpon HOM05D006361 ORTHO05D007824 5.1e-44 182.6 436 34.6
AagrBONN_evm.TU.Sc2ySwM_228.545 Anthoceros agrestis HOM05D006361 ORTHO05D007824 2.1e-42 177.2 350 35.1
Haze_10736 Corylus avellana HOM05D006361 ORTHO05D007824 2.0e-40 170.6 185 53.5
Mapoly0161s0009 Marchantia polymorpha HOM05D006361 ORTHO05D007824 2.1e-34 150.6 364 30.8
Haze_10738 Corylus avellana HOM05D006361 ORTHO05D007824 3.7e-34 149.8 230 47.0
Hund12782 Selenicereus undatus HOM05D006361 ORTHO05D007824 3.7e-34 149.8 131 61.8
arahy.Tifrunner.gnm1.ann1.10LCJA Arachis hypogaea HOM05D006361 ORTHO05D007824 4.5e-32 142.9 282 39.4
Oeu038968.1 Olea europaea HOM05D006361 ORTHO05D007824 2.0e-24 117.5 167 46.7
CBR_g51236 Chara braunii HOM05D006361 ORTHO05D007824 7.6e-24 115.5 480 26.2
Glyma.10G280900 Glycine max HOM05D006361 ORTHO05D007824 8.5e-23 112.1 221 36.2
Actinidia34045 Actinidia chinensis HOM05D006361 ORTHO05D007824 1.2e-21 108.2 134 48.5
MBI06_g04759_MAGBIO Magnolia biondii HOM05D006361 ORTHO05D007824 1.0e-20 105.1 101 62.4
Zm00001eb250300 Zea mays HOM05D006361 ORTHO05D007824 2.8e-18 97.1 118 46.6
Actinidia34046 Actinidia chinensis HOM05D006361 ORTHO05D007824 4.8e-18 96.3 72 70.8
VMungo0251G1708 Vigna mungo HOM05D006361 ORTHO05D007824 1.8e-17 94.4 157 40.8
Cc00_g30730 Coffea canephora HOM05D006361 ORTHO05D007824 2.6e-16 90.5 86 57.0
SMO115G0015 Selaginella moellendorffii HOM05D006361 ORTHO05D007824 1.4e-14 84.7 258 28.3
Sabra19G0029800 Salix brachista HOM05D006361 ORTHO05D007824 5.5e-14 82.8 75 58.7
Pp3c10_230 Physcomitrium patens HOM05D006361 ORTHO05D007824 1.0e-12 78.6 251 23.9
SMO166G0069 Selaginella moellendorffii HOM05D006361 ORTHO05D007824 1.8e-12 77.8 186 28.5
Hma1.2p1_0068F.1_g037180 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 1.5e-11 74.7 53 67.9
Cc00_g35660 Coffea canephora HOM05D006361 ORTHO05D007824 2.6e-11 73.9 66 62.1
Cc00_g15950 Coffea canephora HOM05D006361 ORTHO05D007824 4.4e-11 73.2 67 59.7
VMungo1215G0447 Vigna mungo HOM05D006361 ORTHO05D007824 9.1e-09 65.5 47 66.0
VMungo0647G2130 Vigna mungo HOM05D004174 ORTHO05D004624 1.2e-08 65.1 49 63.3


User provided reference genes

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