Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000944g0040 Nicotiana tabacum HOM05D006757 ORTHO05D004651 2.7e-191 671.8 332 100.0
Nitab4.5_0004543g0020 Nicotiana tabacum HOM05D006757 ORTHO05D004651 2.2e-124 449.5 235 97.4
Solyc01g007880.4 Solanum lycopersicum HOM05D006757 ORTHO05D004651 1.7e-116 423.3 247 88.3
Sopen01g003410 Solanum pennellii HOM05D006757 ORTHO05D004651 9.3e-115 417.5 247 87.4
Dinv02708 Davidia involucrata HOM05D006757 ORTHO05D004651 2.9e-84 316.2 247 63.6
CSS0018736 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 1.5e-80 303.9 235 64.7
Peaxi162Scf00097g00232 Petunia axillaris HOM05D006757 ORTHO05D004651 1.4e-78 297.4 215 74.0
GSVIVG01010290001 Vitis vinifera HOM05D006757 ORTHO05D004651 4.5e-77 292.4 235 60.0
Actinidia12418 Actinidia chinensis HOM05D006757 ORTHO05D004651 5.0e-76 288.9 247 58.3
TAR622G0072 Trochodendron aralioides HOM05D006757 ORTHO05D004651 2.1e-74 283.5 235 57.9
MD16G1009700 Malus domestica HOM05D006757 ORTHO05D004651 8.0e-74 281.6 247 57.1
Nn4g24781 Nelumbo nucifera HOM05D006757 ORTHO05D004651 5.2e-73 278.9 235 57.0
Lj6C727G2 Lonicera japonica HOM05D006757 ORTHO05D004651 2.0e-72 276.9 271 54.2
MSTRG.2098 Avicennia marina HOM05D006757 ORTHO05D004651 3.4e-72 276.2 235 59.1
Prupe.1G340900 Prunus persica HOM05D006757 ORTHO05D004651 4.4e-72 275.8 249 56.2
Gohir.D01G136700 Gossypium hirsutum HOM05D006757 ORTHO05D004651 5.7e-72 275.4 247 53.4
Migut.E00572 Erythranthe guttata HOM05D006757 ORTHO05D004651 9.8e-72 274.6 218 60.6
Gohir.A01G144000 Gossypium hirsutum HOM05D006757 ORTHO05D004651 9.8e-72 274.6 247 53.8
Duzib248G0842 Durio zibethinus HOM05D006757 ORTHO05D004651 1.3e-71 274.2 247 53.8
Gorai.002G169200 Gossypium raimondii HOM05D006757 ORTHO05D004651 1.3e-71 274.2 235 54.9
CiPaw.05G164400 Carya illinoinensis HOM05D006757 ORTHO05D004651 2.8e-71 273.1 235 56.6
FAN12G3615 Fragaria x ananassa HOM05D006757 ORTHO05D004651 3.1e-70 269.6 235 54.9
RcHm_v2.0_Chr4g0445651 Rosa chinensis HOM05D006757 ORTHO05D004651 3.5e-69 266.2 235 54.0
FAN07G0462 Fragaria x ananassa HOM05D006757 ORTHO05D004651 7.7e-69 265.0 235 54.0
Thecc.02G299300 Theobroma cacao HOM05D006757 ORTHO05D004651 7.7e-69 265.0 247 51.8
Cc11_g03340 Coffea canephora HOM05D006757 ORTHO05D004651 1.0e-68 264.6 230 57.4
Rhsim09G0078600 Rhododendron simsii HOM05D006757 ORTHO05D004651 2.9e-68 263.1 215 59.5
FAN17G2536 Fragaria x ananassa HOM05D006757 ORTHO05D004651 3.8e-68 262.7 235 53.6
Sabra10G0071900 Salix brachista HOM05D006757 ORTHO05D004651 1.1e-67 261.2 254 51.6
SGA_v2.0_scaffold470G52072 Striga asiatica HOM05D006757 ORTHO05D004651 4.2e-67 259.2 221 59.3
Eucgr.G02041 Eucalyptus grandis HOM05D006757 ORTHO05D004651 7.2e-67 258.5 239 54.0
Aqoxy3G04184 Aquilegia oxysepala HOM05D006757 ORTHO05D004651 2.8e-66 256.5 234 53.8
TWI53G1444 Tripterygium wilfordii HOM05D006757 ORTHO05D004651 1.4e-65 254.2 235 53.6
Lalb_Chr21g0306871 Lupinus albus HOM05D006757 ORTHO05D004651 1.2e-64 251.1 235 53.6
DCAR_030323 Daucus carota HOM05D006757 ORTHO05D004651 1.5e-64 250.8 214 59.3
Ca_11197_v3 Cicer arietinum L. HOM05D006757 ORTHO05D004651 2.0e-64 250.4 230 53.9
CANSAT78G0289 Cannabis sativa HOM05D006757 ORTHO05D004651 2.6e-64 250.0 247 48.2
FvH4_4g36030 Fragaria vesca HOM05D006757 ORTHO05D004651 3.4e-64 249.6 215 54.9
Atru.chr11.1028 Acer truncatum HOM05D006757 ORTHO05D004651 4.4e-64 249.2 208 56.2
vmacro10765 Vaccinium macrocarpon HOM05D006757 ORTHO05D004651 4.4e-64 249.2 225 57.3
EL10Ac6g15397 Beta vulgaris HOM05D006757 ORTHO05D004651 2.8e-63 246.5 247 48.6
TPR.G2437 Trifolium pratense HOM05D006757 ORTHO05D004651 3.7e-63 246.1 231 53.2
Manes.17G092000 Manihot esculenta HOM05D006757 ORTHO05D004651 6.3e-63 245.4 215 55.3
Lj5g0011768 Lotus japonicus HOM05D006757 ORTHO05D004651 8.3e-63 245.0 230 52.6
arahy.Tifrunner.gnm1.ann1.CLVE3A Arachis hypogaea HOM05D006757 ORTHO05D004651 1.1e-62 244.6 236 52.1
Psat6g231440 Pisum sativum HOM05D006757 ORTHO05D004651 1.1e-62 244.6 232 52.2
COL.COLO4_27539 Corchorus olitorius HOM05D006757 ORTHO05D004651 1.4e-62 244.2 217 53.9
Medtr1g112280 Medicago truncatula HOM05D006757 ORTHO05D004651 1.4e-62 244.2 230 53.5
arahy.Tifrunner.gnm1.ann1.18R96V Arachis hypogaea HOM05D006757 ORTHO05D004651 1.8e-62 243.8 236 51.7
Cpa.g.sc2.85 Carica papaya HOM05D006757 ORTHO05D004651 1.8e-62 243.8 213 55.4
PGR142G0977 Punica granatum HOM05D006757 ORTHO05D004651 3.1e-62 243.0 235 51.5
Ciclev10006553m.g Citrus clementina HOM05D006757 ORTHO05D004651 7.0e-62 241.9 213 55.4
QL03p041041 Quercus lobata HOM05D006757 ORTHO05D004651 2.0e-61 240.4 348 40.5
Phvul.007G020500 Phaseolus vulgaris HOM05D006757 ORTHO05D004651 2.7e-61 240.0 236 50.0
ClCG01G006950 Citrullus lanatus HOM05D006757 ORTHO05D004651 3.5e-61 239.6 249 46.6
MELO3C005216.2 Cucumis melo HOM05D006757 ORTHO05D004651 3.5e-61 239.6 237 47.3
VMungo0720G1053 Vigna mungo HOM05D006757 ORTHO05D004651 1.0e-60 238.0 237 48.9
BcaC08g46956 Brassica carinata HOM05D006757 ORTHO05D004651 2.3e-60 236.9 228 53.5
Lsat_1_v5_gn_8_33901 Lactuca sativa HOM05D006757 ORTHO05D004651 2.3e-60 236.9 255 50.2
PSO063G3495 Papaver somniferum HOM05D006757 ORTHO05D004651 6.6e-60 235.3 235 50.6
AUR62017786 Chenopodium quinoa HOM05D006757 ORTHO05D004651 1.5e-59 234.2 230 50.4
CsaV3_5G017370 Cucumis sativus L. HOM05D006757 ORTHO05D004651 1.9e-59 233.8 237 46.0
Thhalv10018185m.g Eutrema salsugineum HOM05D006757 ORTHO05D004651 7.3e-59 231.9 240 51.2
ECA233G5323 Erigeron canadensis HOM05D006757 ORTHO05D004651 9.5e-59 231.5 260 46.5
Glyma.10G280500 Glycine max HOM05D006757 ORTHO05D004651 9.5e-59 231.5 236 48.7
AL2G34890 Arabidopsis lyrata HOM05D006757 ORTHO05D004651 1.2e-58 231.1 249 48.6
AT1G75010 Arabidopsis thaliana HOM05D006757 ORTHO05D004651 2.1e-58 230.3 234 51.3
Sp5g30140 Schrenkiella parvula HOM05D006757 ORTHO05D004651 2.1e-58 230.3 289 45.0
BraA07t31608Z Brassica rapa HOM05D006757 ORTHO05D004651 2.8e-58 229.9 228 52.2
A07p40640 Brassica napus HOM05D006757 ORTHO05D004651 6.1e-58 228.8 228 52.6
AUR62003477 Chenopodium quinoa HOM05D006757 ORTHO05D004651 6.1e-58 228.8 218 49.5
HanXRQChr12g0365871 Helianthus annuus HOM05D006757 ORTHO05D004651 6.1e-58 228.8 243 50.2
BcaC08g46933 Brassica carinata HOM05D006757 ORTHO05D004651 1.4e-57 227.6 240 50.0
Carub.0002s2179 Capsella rubella HOM05D006757 ORTHO05D004651 1.8e-57 227.3 236 50.8
THA.LOC104809054 Tarenaya hassleriana HOM05D006757 ORTHO05D004651 6.8e-57 225.3 240 50.0
FAN22G1875 Fragaria x ananassa HOM05D006757 ORTHO05D004651 4.4e-56 222.6 213 52.1
BolC6t39938H Brassica oleracea HOM05D006757 ORTHO05D004651 5.8e-56 222.2 241 49.4
Aa31LG4G5230 Aethionema arabicum HOM05D006757 ORTHO05D004651 9.8e-56 221.5 240 48.8
CAN.G282.84 Capsicum annuum HOM05D006757 ORTHO05D004651 8.3e-55 218.4 125 88.0
CARHR068320 Cardamine hirsuta HOM05D006757 ORTHO05D004651 4.6e-53 212.6 220 50.5
C06p49010 Brassica napus HOM05D006757 ORTHO05D004651 7.8e-53 211.8 266 45.5
ATR0807G004 Amborella trichopoda HOM05D006757 ORTHO05D004651 9.5e-51 204.9 236 43.6
CSS0036943 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 6.4e-47 192.2 168 60.1
Os09g0555600 Oryza sativa ssp. japonica HOM05D006757 ORTHO05D004651 8.3e-47 191.8 235 44.7
unitig_699.g19471 Utricularia gibba HOM05D006757 ORTHO05D004651 3.0e-44 183.3 233 42.9
BcaNung05827 Brassica carinata HOM05D006757 ORTHO05D004651 6.8e-41 172.2 593 26.8
Oeu001141.1 Olea europaea HOM05D006757 ORTHO05D004651 3.4e-40 169.9 158 58.2
SalBow2G2705 Salvia bowleyana HOM05D006757 ORTHO05D004651 1.7e-39 167.5 152 52.0
HPP92_025367 Vanilla planifolia HOM05D006757 ORTHO05D004651 3.5e-37 159.8 235 35.7
Sc17g0005480 Simmondsia chinensis HOM05D006757 ORTHO05D004651 7.8e-37 158.7 169 47.9
Sed0027541 Sechium edule HOM05D006757 ORTHO05D004651 9.5e-35 151.8 151 47.7
Potri.010G099300 Populus trichocarpa HOM05D006757 ORTHO05D004651 2.0e-32 144.1 123 54.5
BolC2t09256H Brassica oleracea HOM05D006757 ORTHO05D004651 3.2e-30 136.7 191 41.4
Glyma.20G109150 Glycine max HOM05D006757 ORTHO05D004651 4.9e-15 86.3 82 48.8
SalBow2G2121 Salvia bowleyana HOM05D006757 ORTHO05D004651 1.6e-13 81.3 85 50.6
Mapoly0058s0047 Marchantia polymorpha HOM05D006757 ORTHO05D004651 2.1e-13 80.9 215 26.0
C02p32190 Brassica napus HOM05D006757 ORTHO05D004651 7.9e-13 79.0 61 54.1
BcaC03g15537 Brassica carinata HOM05D006757 ORTHO05D004651 1.8e-09 67.8 163 31.9
Hma1.2p1_0933F.1_g238410 Hydrangea macrophylla HOM05D006757 ORTHO05D004651 6.9e-09 65.9 41 65.9
MCO11G402 Micromonas commoda HOM05D001616 ORTHO05D003701 1.9e-06 57.8 184 26.1
Hund01947 Selenicereus undatus HOM05D001616 ORTHO05D004707 2.5e-06 57.4 181 24.9


User provided reference genes

Program Settings