Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000943g0130 Nicotiana tabacum HOM05D007523 ORTHO05D009520 3.6e-87 325.1 188 100.0
Nitab4.5_0006741g0030 Nicotiana tabacum HOM05D007523 ORTHO05D009520 9.8e-69 263.8 168 94.6
PGSC0003DMG400029292 Solanum tuberosum HOM05D007523 ORTHO05D009520 8.3e-60 234.2 179 78.8
Peaxi162Scf00876g00434 Petunia axillaris HOM05D007523 ORTHO05D009520 9.2e-59 230.7 176 76.1
Solyc12g096090.2 Solanum lycopersicum HOM05D007523 ORTHO05D009520 3.5e-58 228.8 175 79.4
CAN.G947.41 Capsicum annuum HOM05D007523 ORTHO05D009520 5.9e-58 228.0 171 83.6
Sopen12g031980 Solanum pennellii HOM05D007523 ORTHO05D009520 1.6e-55 219.9 171 78.9
Peaxi162Scf00972g00043 Petunia axillaris HOM05D007523 ORTHO05D009520 2.6e-45 186.0 163 77.3
CSS0001694 Camellia sinensis var. sinensis HOM05D007523 ORTHO05D009520 6.0e-34 148.3 169 58.6
CSS0003197 Camellia sinensis var. sinensis HOM05D007523 ORTHO05D009520 2.3e-33 146.4 169 57.4
vmacro00070 Vaccinium macrocarpon HOM05D007523 ORTHO05D009520 8.6e-33 144.4 177 51.4
Dinv28021 Davidia involucrata HOM05D007523 ORTHO05D009520 8.1e-31 137.9 159 58.5
GSVIVG01026296001 Vitis vinifera HOM05D007523 ORTHO05D009520 2.4e-30 136.3 173 53.8
QL12p000900 Quercus lobata HOM05D007523 ORTHO05D009520 5.8e-29 131.7 173 53.8
TAR629G3055 Trochodendron aralioides HOM05D007523 ORTHO05D009520 5.8e-29 131.7 151 58.3
Potri.001G132400 Populus trichocarpa HOM05D007523 ORTHO05D009520 1.1e-27 127.5 174 52.9
Haze_08076 Corylus avellana HOM05D007523 ORTHO05D009520 2.1e-26 123.2 144 60.4
ECA240G1522 Erigeron canadensis HOM05D007523 ORTHO05D009520 3.5e-26 122.5 161 54.0
CANSAT21G1314 Cannabis sativa HOM05D007523 ORTHO05D009520 4.6e-26 122.1 156 55.1
Actinidia04633 Actinidia chinensis HOM05D007523 ORTHO05D009520 6.0e-26 121.7 152 53.9
CiPaw.11G102500 Carya illinoinensis HOM05D007523 ORTHO05D009520 6.0e-26 121.7 156 57.1
Sabra01G0102200 Salix brachista HOM05D007523 ORTHO05D009520 6.0e-26 121.7 150 56.7
ClCG07G002350 Citrullus lanatus HOM05D007523 ORTHO05D009520 1.3e-25 120.6 155 56.1
HanXRQChr03g0082201 Helianthus annuus HOM05D007523 ORTHO05D009520 1.7e-25 120.2 165 52.1
Cc08_g04400 Coffea canephora HOM05D007523 ORTHO05D009520 2.3e-25 119.8 173 45.1
Prupe.5G021500 Prunus persica HOM05D007523 ORTHO05D009520 3.9e-25 119.0 165 56.4
Thecc.02G365300 Theobroma cacao HOM05D007523 ORTHO05D009520 8.6e-25 117.9 101 72.3
Sed0002333 Sechium edule HOM05D007523 ORTHO05D009520 2.5e-24 116.3 155 56.8
TWI34G1559 Tripterygium wilfordii HOM05D007523 ORTHO05D009520 2.5e-24 116.3 137 62.8
Lalb_Chr16g0392051 Lupinus albus HOM05D007523 ORTHO05D009520 3.3e-24 115.9 150 52.7
Manes.17G008000 Manihot esculenta HOM05D007523 ORTHO05D009520 3.3e-24 115.9 173 50.3
SGA_v2.0_scaffold96G29060 Striga asiatica HOM05D007523 ORTHO05D009520 3.3e-24 115.9 147 53.1
CsaV3_3G030330 Cucumis sativus L. HOM05D007523 ORTHO05D009520 5.6e-24 115.2 147 55.1
Lj4g0001215 Lotus japonicus HOM05D007523 ORTHO05D009520 9.6e-24 114.4 156 53.8
Rhsim11G0026000 Rhododendron simsii HOM05D007523 ORTHO05D009520 1.6e-23 113.6 156 49.4
Migut.E01344 Erythranthe guttata HOM05D007523 ORTHO05D009520 3.6e-23 112.5 147 52.4
Nn1g02124 Nelumbo nucifera HOM05D007523 ORTHO05D009520 3.6e-23 112.5 150 54.0
Migut.A00547 Erythranthe guttata HOM05D007523 ORTHO05D009520 4.7e-23 112.1 105 64.8
Oeu017333.1 Olea europaea HOM05D007523 ORTHO05D009520 6.2e-23 111.7 152 51.3
ATR1098G100 Amborella trichopoda HOM05D007523 ORTHO05D009520 8.1e-23 111.3 98 74.5
MD06G1014600 Malus domestica HOM05D007523 ORTHO05D009520 1.1e-22 110.9 167 52.1
Duzib248G0934 Durio zibethinus HOM05D007523 ORTHO05D009520 1.8e-22 110.2 99 69.7
arahy.Tifrunner.gnm1.ann1.19GUIE Arachis hypogaea HOM05D007523 ORTHO05D009520 2.4e-22 109.8 99 74.7
arahy.Tifrunner.gnm1.ann1.7DC73F Arachis hypogaea HOM05D007523 ORTHO05D009520 2.4e-22 109.8 99 74.7
Atru.chr6.1496 Acer truncatum HOM05D007523 ORTHO05D009520 4.0e-22 109.0 151 51.7
MSTRG.1775 Avicennia marina HOM05D007523 ORTHO05D009520 4.0e-22 109.0 162 50.6
Aqoxy4G00046 Aquilegia oxysepala HOM05D007523 ORTHO05D009520 9.0e-22 107.8 158 50.0
Ciclev10002679m.g Citrus clementina HOM05D007523 ORTHO05D009520 9.0e-22 107.8 169 47.3
FAN04G1224 Fragaria x ananassa HOM05D007523 ORTHO05D009520 9.0e-22 107.8 151 57.0
Eucgr.D02602 Eucalyptus grandis HOM05D007523 ORTHO05D009520 1.2e-21 107.5 182 52.7
AT4G19070 Arabidopsis thaliana HOM05D007523 ORTHO05D009520 2.0e-21 106.7 139 55.4
FAN18G0623 Fragaria x ananassa HOM05D007523 ORTHO05D009520 2.6e-21 106.3 151 56.3
FAN18G3486 Fragaria x ananassa HOM05D007523 ORTHO05D009520 2.6e-21 106.3 151 56.3
THA.LOC104811020 Tarenaya hassleriana HOM05D007523 ORTHO05D009520 2.6e-21 106.3 92 75.0
FvH4_5g23880 Fragaria vesca HOM05D007523 ORTHO05D009520 3.4e-21 105.9 150 56.7
AL7G35030 Arabidopsis lyrata HOM05D007523 ORTHO05D009520 4.4e-21 105.5 177 46.9
PGR031G0795 Punica granatum HOM05D007523 ORTHO05D009520 5.8e-21 105.1 102 75.5
RcHm_v2.0_Chr7g0213271 Rosa chinensis HOM05D007523 ORTHO05D009520 2.2e-20 103.2 99 74.7
Carub.0007s2207 Capsella rubella HOM05D007523 ORTHO05D009520 2.9e-20 102.8 169 49.1
C07p50210 Brassica napus HOM05D000137 ORTHO05D002305 6.4e-20 101.7 168 47.6
Sc22g0001970 Simmondsia chinensis HOM05D007523 ORTHO05D009520 8.4e-20 101.3 138 52.9
CARHR225970 Cardamine hirsuta HOM05D007523 ORTHO05D009520 1.1e-19 100.9 98 67.3
Gorai.008G189000 Gossypium raimondii HOM05D007523 ORTHO05D009520 1.1e-19 100.9 153 48.4
Ah.12g055890 Amaranthus hybridus HOM05D002287 ORTHO05D002588 1.4e-19 100.5 150 48.0
BolC7t45523H Brassica oleracea HOM05D007523 ORTHO05D009520 1.4e-19 100.5 95 69.5
Medtr8g071180 Medicago truncatula HOM05D007523 ORTHO05D009520 1.4e-19 100.5 149 51.0
A03p51710 Brassica napus HOM05D000137 ORTHO05D002305 1.9e-19 100.1 94 70.2
BraA03t14258Z Brassica rapa HOM05D000452 ORTHO05D000647 1.9e-19 100.1 94 70.2
SalBow8G2402 Salvia bowleyana HOM05D007523 ORTHO05D009520 1.9e-19 100.1 174 46.6
Sp7g17790 Schrenkiella parvula HOM05D007523 ORTHO05D005023 1.9e-19 100.1 95 69.5
BcaC06g30615 Brassica carinata HOM05D007523 ORTHO05D009520 2.4e-19 99.8 92 71.7
Ca_22486_v3 Cicer arietinum L. HOM05D007523 ORTHO05D009520 2.4e-19 99.8 113 61.9
BcaNung03083 Brassica carinata HOM05D007523 ORTHO05D009520 3.2e-19 99.4 92 70.7
Gohir.A12G173966 Gossypium hirsutum HOM05D007523 ORTHO05D009520 3.2e-19 99.4 150 49.3
Aa31LG6G1770 Aethionema arabicum HOM05D007523 ORTHO05D005023 5.4e-19 98.6 138 50.0
Thhalv10026426m.g Eutrema salsugineum HOM05D007523 ORTHO05D009520 5.4e-19 98.6 142 50.7
Gohir.D12G176600 Gossypium hirsutum HOM05D007523 ORTHO05D009520 7.1e-19 98.2 153 47.7
Cpa.g.sc355.1 Carica papaya HOM05D007523 ORTHO05D009520 1.6e-18 97.1 91 71.4
Psat4g110520 Pisum sativum HOM05D007523 ORTHO05D009520 4.6e-18 95.5 128 57.0
Nn3g19239 Nelumbo nucifera HOM05D007523 ORTHO05D009520 6.0e-18 95.1 101 64.4
TPR.G31317 Trifolium pratense HOM05D007523 ORTHO05D009520 1.0e-17 94.4 133 54.1
PSO675G0835 Papaver somniferum HOM05D007523 ORTHO05D009520 2.3e-17 93.2 121 57.0
PSO675G0851 Papaver somniferum HOM05D007523 ORTHO05D009520 2.3e-17 93.2 151 49.0
Phvul.003G279400 Phaseolus vulgaris HOM05D007523 ORTHO05D009520 2.3e-17 93.2 80 73.8
VMungo0251G0133 Vigna mungo HOM05D007523 ORTHO05D009520 3.0e-17 92.8 89 67.4
CDE05G0732 Ceratophyllum demersum HOM05D007523 ORTHO05D009520 5.1e-17 92.0 94 68.1
Glyma.16G104300 Glycine max HOM05D007523 ORTHO05D009520 1.1e-16 90.9 80 72.5
SalBow4G0950 Salvia bowleyana HOM05D007523 ORTHO05D009520 1.9e-16 90.1 80 71.2
EL10Ac5g11951 Beta vulgaris HOM05D007523 ORTHO05D009520 1.3e-15 87.4 90 68.9
unitig_0.g2217 Utricularia gibba HOM05D007523 ORTHO05D009520 1.6e-15 87.0 91 68.1
MSTRG.11889 Avicennia marina HOM05D007523 ORTHO05D009520 2.8e-15 86.3 82 75.6
MBI18_g28211_MAGBIO Magnolia biondii HOM05D007523 ORTHO05D009520 8.1e-15 84.7 145 47.6
Mapoly0024s0063 Marchantia polymorpha HOM05D007523 ORTHO05D009520 8.1e-15 84.7 89 65.2
AUR62027336 Chenopodium quinoa HOM05D007523 ORTHO05D009520 1.1e-14 84.3 125 54.4
HPP92_012195 Vanilla planifolia HOM05D007523 ORTHO05D009520 5.3e-14 82.0 137 50.4
AUR62007395 Chenopodium quinoa HOM05D002287 ORTHO05D009520 2.0e-13 80.1 85 64.7
Pp3c19_7810 Physcomitrium patens HOM05D007523 ORTHO05D009520 4.5e-13 79.0 94 55.3
SMO353G0121 Selaginella moellendorffii HOM05D007523 ORTHO05D009520 5.8e-13 78.6 96 60.4
AagrBONN_evm.TU.Sc2ySwM_368.2556 Anthoceros agrestis HOM05D007523 ORTHO05D009520 2.9e-12 76.3 95 50.5
Os07g0143600 Oryza sativa ssp. japonica HOM05D007523 ORTHO05D009520 1.4e-11 73.9 81 65.4
SMO364G0280 Selaginella moellendorffii HOM05D007523 ORTHO05D009520 1.9e-11 73.6 82 67.1
Mapoly0010s0014 Marchantia polymorpha HOM05D007523 ORTHO05D009520 2.3e-09 66.6 96 52.1
COL.COLO4_11248 Corchorus olitorius HOM05D007523 ORTHO05D009520 8.7e-09 64.7 105 51.4


User provided reference genes

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