Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000943g0070 Nicotiana tabacum HOM05D005907 ORTHO05D007033 2.0e-50 202.2 106 100.0
Nitab4.5_0009213g0030 Nicotiana tabacum HOM05D005907 ORTHO05D007033 2.7e-39 165.2 131 73.3
Peaxi162Scf00876g00429 Petunia axillaris HOM05D005907 ORTHO05D007033 1.9e-24 115.9 177 44.6
Nitab4.5_0000986g0090 Nicotiana tabacum HOM05D005907 ORTHO05D007033 2.4e-16 89.0 172 36.6
Lj3A1053G42 Lonicera japonica HOM05D005907 ORTHO05D007033 2.1e-15 85.9 84 57.1
CAN.G998.7 Capsicum annuum HOM05D005907 ORTHO05D007033 3.0e-14 82.0 173 34.7
FvH4_5g24980 Fragaria vesca HOM05D005907 ORTHO05D007033 3.9e-14 81.6 81 56.8
FAN18G3850 Fragaria x ananassa HOM05D005907 ORTHO05D007033 3.9e-14 81.6 81 56.8
Actinidia01244 Actinidia chinensis HOM05D005907 ORTHO05D007033 5.1e-14 81.3 65 66.2
Cc08_g05990 Coffea canephora HOM05D005907 ORTHO05D007033 5.1e-14 81.3 94 44.7
RcHm_v2.0_Chr7g0215261 Rosa chinensis HOM05D005907 ORTHO05D007033 8.6e-14 80.5 90 52.2
FAN04G3107 Fragaria x ananassa HOM05D005907 ORTHO05D007033 1.1e-13 80.1 88 53.4
SalBow4G0438 Salvia bowleyana HOM05D005907 ORTHO05D007033 1.1e-13 80.1 52 69.2
Cfa012308 Carpinus fangiana HOM05D005907 ORTHO05D007033 1.9e-13 79.3 62 62.9
Haze_08422 Corylus avellana HOM05D005907 ORTHO05D007033 1.9e-13 79.3 62 62.9
Nitab4.5_0006244g0030 Nicotiana tabacum HOM05D005907 ORTHO05D007033 1.9e-13 79.3 165 36.4
Oeu047809.2 Olea europaea HOM05D005907 ORTHO05D007033 2.5e-13 79.0 94 48.9
Atru.chr8.2614 Acer truncatum HOM05D005907 ORTHO05D007033 4.3e-13 78.2 95 47.4
Lj2g0019236 Lotus japonicus HOM05D005907 ORTHO05D007033 4.3e-13 78.2 61 59.0
PGSC0003DMG400001952 Solanum tuberosum HOM05D005907 ORTHO05D007033 9.5e-13 77.0 59 62.7
vmacro00100 Vaccinium macrocarpon HOM05D005907 ORTHO05D007033 9.5e-13 77.0 91 49.5
CSS0017808 Camellia sinensis var. sinensis HOM05D005907 ORTHO05D007033 1.2e-12 76.6 94 50.0
EL10Ac5g12591 Beta vulgaris HOM05D005907 ORTHO05D007033 1.6e-12 76.3 65 55.4
FAN08G1334 Fragaria x ananassa HOM05D005907 ORTHO05D007033 1.6e-12 76.3 84 51.2
Oeu046770.1 Olea europaea HOM05D005907 ORTHO05D007033 1.6e-12 76.3 95 47.4
Rhsim11G0037900 Rhododendron simsii HOM05D005907 ORTHO05D007033 1.6e-12 76.3 95 46.3
Solyc08g075290.2 Solanum lycopersicum HOM05D005907 ORTHO05D007033 1.6e-12 76.3 173 31.8
TAR636G1547 Trochodendron aralioides HOM05D005907 ORTHO05D007033 1.6e-12 76.3 91 49.5
GSVIVG01036890001 Vitis vinifera HOM05D005907 ORTHO05D007033 2.8e-12 75.5 94 45.7
Psat4g109120 Pisum sativum HOM05D005907 ORTHO05D007033 3.6e-12 75.1 65 56.9
Dinv37434 Davidia involucrata HOM05D005907 ORTHO05D007033 6.2e-12 74.3 86 53.5
CiPaw.11G074000 Carya illinoinensis HOM05D005907 ORTHO05D007033 8.1e-12 73.9 62 61.3
MSTRG.25750 Avicennia marina HOM05D005907 ORTHO05D007033 1.1e-11 73.6 95 44.2
Migut.A00472 Erythranthe guttata HOM05D005907 ORTHO05D007033 1.1e-11 73.6 91 44.0
Potri.004G235000 Populus trichocarpa HOM05D005907 ORTHO05D007033 1.1e-11 73.6 88 46.6
CANSAT35G1964 Cannabis sativa HOM05D005907 ORTHO05D007033 1.4e-11 73.2 76 48.7
Medtr5g025640 Medicago truncatula HOM05D005907 ORTHO05D007033 1.8e-11 72.8 99 42.4
Psat2g145040 Pisum sativum HOM05D005907 ORTHO05D007033 1.8e-11 72.8 99 43.4
Duzib068G0478 Durio zibethinus HOM05D005907 ORTHO05D007033 2.3e-11 72.4 65 58.5
Glyma.01G153000 Glycine max HOM05D005907 ORTHO05D007033 2.3e-11 72.4 94 37.2
Prupe.5G013600 Prunus persica HOM05D005907 ORTHO05D007033 2.3e-11 72.4 88 45.5
SalBow8G0159 Salvia bowleyana HOM05D005907 ORTHO05D007033 2.3e-11 72.4 69 58.0
Sopen08g023890 Solanum pennellii HOM05D005907 ORTHO05D007033 3.1e-11 72.0 173 30.6
Ciclev10012886m.g Citrus clementina HOM05D005907 ORTHO05D007033 5.2e-11 71.2 89 43.8
Medtr8g072220 Medicago truncatula HOM05D005907 ORTHO05D007033 5.2e-11 71.2 62 54.8
TPR.G8986 Trifolium pratense HOM05D005907 ORTHO05D007033 6.8e-11 70.9 94 44.7
Phvul.002G122500 Phaseolus vulgaris HOM05D005907 ORTHO05D007033 8.9e-11 70.5 62 50.0
SGA_v2.0_scaffold121G33056 Striga asiatica HOM05D005907 ORTHO05D007033 1.2e-10 70.1 64 53.1
arahy.Tifrunner.gnm1.ann1.4G5U2W Arachis hypogaea HOM05D005907 ORTHO05D007033 1.5e-10 69.7 93 41.9
arahy.Tifrunner.gnm1.ann1.Y9HS7A Arachis hypogaea HOM05D005907 ORTHO05D007033 1.5e-10 69.7 93 41.9
Glyma.09G218300 Glycine max HOM05D005907 ORTHO05D007033 1.5e-10 69.7 94 35.1
Sed0007709 Sechium edule HOM05D005907 ORTHO05D007033 1.5e-10 69.7 79 46.8
Thecc.03G320600 Theobroma cacao HOM05D005907 ORTHO05D007033 2.0e-10 69.3 94 43.6
Lalb_Chr05g0215181 Lupinus albus HOM05D005907 ORTHO05D007033 3.4e-10 68.6 99 40.4
Lalb_Chr16g0380441 Lupinus albus HOM05D005907 ORTHO05D007033 3.4e-10 68.6 99 38.4
Manes.15G184500 Manihot esculenta HOM05D005907 ORTHO05D007033 3.4e-10 68.6 95 45.3
Nn3g19120 Nelumbo nucifera HOM05D005907 ORTHO05D007033 4.4e-10 68.2 54 57.4
Eucgr.E01152 Eucalyptus grandis HOM05D005907 ORTHO05D007033 1.3e-09 66.6 65 49.2
Gorai.004G176900 Gossypium raimondii HOM05D005907 ORTHO05D007033 1.3e-09 66.6 91 40.7
Nn1g09337 Nelumbo nucifera HOM05D005907 ORTHO05D007033 1.3e-09 66.6 97 40.2
VMungo1215G2629 Vigna mungo HOM05D001324 ORTHO05D001220 1.3e-09 66.6 94 37.2
Gohir.A08G148600 Gossypium hirsutum HOM05D005907 ORTHO05D007033 2.2e-09 65.9 91 40.7
Phvul.003G278300 Phaseolus vulgaris HOM05D005907 ORTHO05D007033 2.2e-09 65.9 61 55.7
TAR629G0350 Trochodendron aralioides HOM05D005907 ORTHO05D007033 2.2e-09 65.9 59 52.5
COL.COLO4_16745 Corchorus olitorius HOM05D005907 ORTHO05D007033 2.9e-09 65.5 91 40.7
Gohir.D08G169700 Gossypium hirsutum HOM05D005907 ORTHO05D007033 2.9e-09 65.5 91 40.7
ClCG11G016110 Citrullus lanatus HOM05D005907 ORTHO05D007033 4.9e-09 64.7 65 44.6
Hund14310 Selenicereus undatus HOM05D005907 ORTHO05D007033 4.9e-09 64.7 85 38.8
Duzib205G2043 Durio zibethinus HOM05D005907 ORTHO05D007033 6.4e-09 64.3 94 42.6
MD06G1011300 Malus domestica HOM05D005907 ORTHO05D007033 1.1e-08 63.5 64 48.4
Sed0019955 Sechium edule HOM05D005907 ORTHO05D007033 1.1e-08 63.5 73 41.1
Lalb_Chr09g0325061 Lupinus albus HOM05D005907 ORTHO05D007033 1.4e-08 63.2 96 37.5
PGR042G1103 Punica granatum HOM05D005907 ORTHO05D007033 1.9e-08 62.8 71 46.5
ATR0568G210 Amborella trichopoda HOM05D005907 ORTHO05D007033 2.4e-08 62.4 67 47.8
arahy.Tifrunner.gnm1.ann1.93DHY7 Arachis hypogaea HOM05D005907 ORTHO05D007033 2.4e-08 62.4 46 63.0
PSO339G2078 Papaver somniferum HOM05D005907 ORTHO05D007033 2.4e-08 62.4 77 40.3
PGR031G0343 Punica granatum HOM05D005907 ORTHO05D007033 5.4e-08 61.2 91 41.8
unitig_37.g12906 Utricularia gibba HOM05D005907 ORTHO05D007033 7.1e-08 60.8 64 46.9
Thhalv10008873m.g Eutrema salsugineum HOM05D005907 ORTHO05D007033 9.2e-08 60.5 85 37.6
CsaV3_4G007120 Cucumis sativus L. HOM05D005907 ORTHO05D007033 1.2e-07 60.1 76 40.8
Glyma.16G076400 Glycine max HOM05D005907 ORTHO05D007033 1.2e-07 60.1 92 39.1
BcaC07g37737 Brassica carinata HOM05D005907 ORTHO05D007033 1.6e-07 59.7 59 40.7
BolC8t48118H Brassica oleracea HOM05D005907 ORTHO05D007033 1.6e-07 59.7 59 40.7
HanXRQChr08g0233691 Helianthus annuus HOM05D005907 ORTHO05D007033 1.6e-07 59.7 88 40.9
TWI60G0533 Tripterygium wilfordii HOM05D005907 ORTHO05D007033 1.6e-07 59.7 82 41.5
Gohir.A12G201000 Gossypium hirsutum HOM05D005907 ORTHO05D007033 2.7e-07 58.9 62 46.8
ClCG07G011130 Citrullus lanatus HOM05D005907 ORTHO05D007033 4.6e-07 58.2 90 37.8
Sed0021253 Sechium edule HOM05D005907 ORTHO05D007033 6.0e-07 57.8 71 42.3
A08p10440 Brassica napus HOM05D005907 ORTHO05D007033 7.8e-07 57.4 100 30.0
BraA08t33042Z Brassica rapa HOM05D005907 ORTHO05D007033 7.8e-07 57.4 100 30.0
THA.LOC104814387 Tarenaya hassleriana HOM05D005907 ORTHO05D007033 1.0e-06 57.0 86 36.0
Sc07g0008040 Simmondsia chinensis HOM05D005907 ORTHO05D007033 2.3e-06 55.8 35 60.0
AT4G19370 Arabidopsis thaliana HOM05D005907 ORTHO05D007033 3.0e-06 55.5 55 45.5
Gohir.D12G203800 Gossypium hirsutum HOM05D005907 ORTHO05D007033 3.0e-06 55.5 88 37.5
AL1G45790 Arabidopsis lyrata HOM05D005907 ORTHO05D007033 3.9e-06 55.1 95 30.5
CARHR031020 Cardamine hirsuta HOM05D005907 ORTHO05D007033 3.9e-06 55.1 87 32.2
Sp1g27370 Schrenkiella parvula HOM05D005907 ORTHO05D007033 3.9e-06 55.1 47 42.6
THA.LOC104806200 Tarenaya hassleriana HOM05D005907 ORTHO05D007033 3.9e-06 55.1 92 35.9
Gorai.008G218600 Gossypium raimondii HOM05D005907 ORTHO05D007033 5.1e-06 54.7 87 36.8
Manes.17G003749 Manihot esculenta HOM05D005907 ORTHO05D007033 5.1e-06 54.7 66 39.4
BcaB04g18131 Brassica carinata HOM05D005907 ORTHO05D007033 6.6e-06 54.3 41 48.8
ECA233G3754 Erigeron canadensis HOM05D005907 ORTHO05D007033 6.6e-06 54.3 68 45.6
Carub.0007s2186 Capsella rubella HOM05D005907 ORTHO05D007033 8.6e-06 53.9 55 43.6


User provided reference genes

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