Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000939g0010 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.6e-79 299.3 145 100.0
Nitab4.5_0000020g0400 Nicotiana tabacum HOM05D002441 ORTHO05D002376 4.4e-69 264.6 143 87.4
Nitab4.5_0006891g0010 Nicotiana tabacum HOM05D002441 ORTHO05D008317 7.5e-61 237.3 145 80.0
Nitab4.5_0001403g0010 Nicotiana tabacum HOM05D002441 ORTHO05D008317 9.0e-38 160.6 143 53.8
Nitab4.5_0000980g0190 Nicotiana tabacum HOM05D002441 ORTHO05D008317 4.9e-36 154.8 143 49.0
Nitab4.5_0008232g0050 Nicotiana tabacum HOM05D002441 ORTHO05D008317 3.2e-35 152.1 98 76.5
Nitab4.5_0003787g0030 Nicotiana tabacum HOM05D002441 ORTHO05D002376 1.1e-32 143.7 141 46.8
Nitab4.5_0002265g0190 Nicotiana tabacum HOM05D000211 ORTHO05D008317 7.4e-32 141.0 76 86.8
Nitab4.5_0007533g0040 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.1e-30 137.1 141 46.1
Nitab4.5_0025596g0010 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.1e-30 137.1 145 51.7
Nitab4.5_0000634g0090 Nicotiana tabacum HOM05D000255 ORTHO05D008317 1.8e-30 136.3 75 86.7
CAN.G321.48 Capsicum annuum HOM05D001267 ORTHO05D002376 1.7e-28 129.8 117 53.8
Nitab4.5_0008694g0040 Nicotiana tabacum HOM05D000193 ORTHO05D008317 4.9e-28 128.3 142 46.5
Nitab4.5_0000305g0130 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.4e-27 126.7 142 47.2
Nitab4.5_0009717g0060 Nicotiana tabacum HOM05D002441 ORTHO05D008317 2.4e-27 125.9 79 75.9
Nitab4.5_0001129g0140 Nicotiana tabacum HOM05D002441 ORTHO05D008317 8.7e-25 117.5 143 41.3
Nitab4.5_0004275g0020 Nicotiana tabacum HOM05D002975 ORTHO05D008317 8.7e-25 117.5 92 63.0
Nitab4.5_0004069g0050 Nicotiana tabacum HOM05D002441 ORTHO05D008317 9.6e-24 114.0 68 80.9
Nitab4.5_0000534g0030 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.4e-22 110.2 106 48.1
Nitab4.5_0009595g0020 Nicotiana tabacum HOM05D002441 ORTHO05D008317 4.0e-22 108.6 106 49.1
Nitab4.5_0000083g0280 Nicotiana tabacum HOM05D002441 ORTHO05D008317 5.3e-22 108.2 106 50.0
Peaxi162Scf00006g02913 Petunia axillaris HOM05D002441 ORTHO05D002376 1.0e-20 104.0 97 51.5
Peaxi162Scf00496g00410 Petunia axillaris HOM05D002441 ORTHO05D008317 1.0e-20 104.0 100 52.0
Nitab4.5_0000935g0200 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.1e-19 100.5 52 90.4
Nitab4.5_0005350g0010 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.1e-19 100.5 106 45.3
Nitab4.5_0005875g0070 Nicotiana tabacum HOM05D000096 ORTHO05D008317 2.1e-18 96.3 99 50.5
Nitab4.5_0008875g0020 Nicotiana tabacum HOM05D002441 ORTHO05D008317 2.7e-18 95.9 106 44.3
Peaxi162Scf00774g00217 Petunia axillaris HOM05D002441 ORTHO05D002376 3.9e-17 92.0 95 48.4
Nitab4.5_0000970g0060 Nicotiana tabacum HOM05D002441 ORTHO05D002376 1.1e-16 90.5 149 37.6
Peaxi162Scf00602g00313 Petunia axillaris HOM05D002441 ORTHO05D002376 1.1e-16 90.5 95 50.5
Nitab4.5_0004405g0020 Nicotiana tabacum HOM05D002441 ORTHO05D008317 4.3e-16 88.6 45 91.1
Nitab4.5_0008414g0060 Nicotiana tabacum HOM05D002441 ORTHO05D008317 4.3e-16 88.6 100 47.0
arahy.Tifrunner.gnm1.ann1.BDM5B3 Arachis hypogaea HOM05D002441 ORTHO05D002376 5.7e-16 88.2 144 31.9
Peaxi162Scf00060g00311 Petunia axillaris HOM05D002441 ORTHO05D002376 7.4e-16 87.8 136 36.8
arahy.Tifrunner.gnm1.ann1.DBF1B4 Arachis hypogaea HOM05D002441 ORTHO05D002376 9.7e-16 87.4 144 32.6
arahy.Tifrunner.gnm1.ann1.9DML6S Arachis hypogaea HOM05D002441 ORTHO05D002376 1.6e-15 86.7 144 31.9
arahy.Tifrunner.gnm1.ann1.U0JAJ0 Arachis hypogaea HOM05D002441 ORTHO05D002376 4.8e-15 85.1 144 31.9
Nitab4.5_0006081g0030 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.1e-14 84.0 47 80.9
arahy.Tifrunner.gnm1.ann1.Y0MAT2 Arachis hypogaea HOM05D002441 ORTHO05D002376 3.1e-14 82.4 144 29.2
Nitab4.5_0000109g0580 Nicotiana tabacum HOM05D002441 ORTHO05D008317 3.1e-14 82.4 44 84.1
Nitab4.5_0003780g0040 Nicotiana tabacum HOM05D002441 ORTHO05D008317 5.3e-14 81.6 68 54.4
Nitab4.5_0002702g0050 Nicotiana tabacum HOM05D002441 ORTHO05D002376 1.2e-13 80.5 41 82.9
SGA_v2.0_scaffold9G04715 Striga asiatica HOM05D008036 ORTHO05D000174 2.0e-13 79.7 141 29.8
arahy.Tifrunner.gnm1.ann1.18WZIV Arachis hypogaea HOM05D002441 ORTHO05D002376 5.9e-13 78.2 142 31.0
arahy.Tifrunner.gnm1.ann1.8R9H6F Arachis hypogaea HOM05D002441 ORTHO05D002376 7.7e-13 77.8 138 30.4
arahy.Tifrunner.gnm1.ann1.BHW5G9 Arachis hypogaea HOM05D002441 ORTHO05D002376 7.7e-13 77.8 143 28.0
arahy.Tifrunner.gnm1.ann1.XQZ42W Arachis hypogaea HOM05D002441 ORTHO05D002376 1.3e-12 77.0 143 28.0
arahy.Tifrunner.gnm1.ann1.PUQ8PF Arachis hypogaea HOM05D002441 ORTHO05D002376 2.9e-12 75.9 138 29.7
arahy.Tifrunner.gnm1.ann1.N18BUU Arachis hypogaea HOM05D002441 ORTHO05D008317 5.0e-12 75.1 157 33.1
CAN.G220.26 Capsicum annuum HOM05D002891 ORTHO05D002376 6.5e-12 74.7 106 40.6
arahy.Tifrunner.gnm1.ann1.I5QAZJ Arachis hypogaea HOM05D002441 ORTHO05D002376 1.4e-11 73.6 138 29.7
CAN.G1305.28 Capsicum annuum HOM05D002441 ORTHO05D002376 1.4e-11 73.6 99 41.4
SGA_v2.0_scaffold28G11887 Striga asiatica HOM05D002441 ORTHO05D000174 1.9e-11 73.2 141 25.5
arahy.Tifrunner.gnm1.ann1.11NDG0 Arachis hypogaea HOM05D002441 ORTHO05D002376 2.5e-11 72.8 138 29.0
arahy.Tifrunner.gnm1.ann1.40UDPE Arachis hypogaea HOM05D002441 ORTHO05D002376 2.5e-11 72.8 138 29.0
arahy.Tifrunner.gnm1.ann1.5RWV2W Arachis hypogaea HOM05D002441 ORTHO05D002376 2.5e-11 72.8 138 29.0
arahy.Tifrunner.gnm1.ann1.AFNT1S Arachis hypogaea HOM05D002441 ORTHO05D002376 2.5e-11 72.8 138 29.0
arahy.Tifrunner.gnm1.ann1.FKF8NN Arachis hypogaea HOM05D002441 ORTHO05D002376 2.5e-11 72.8 138 29.0
arahy.Tifrunner.gnm1.ann1.G1FX5D Arachis hypogaea HOM05D002441 ORTHO05D002376 2.5e-11 72.8 138 29.0
arahy.Tifrunner.gnm1.ann1.HTKL5C Arachis hypogaea HOM05D002441 ORTHO05D002376 2.5e-11 72.8 138 29.0
arahy.Tifrunner.gnm1.ann1.IQTA4G Arachis hypogaea HOM05D002441 ORTHO05D002376 2.5e-11 72.8 138 29.0
arahy.Tifrunner.gnm1.ann1.PWRV1I Arachis hypogaea HOM05D002441 ORTHO05D002376 2.5e-11 72.8 138 29.0
arahy.Tifrunner.gnm1.ann1.0SIM4H Arachis hypogaea HOM05D002441 ORTHO05D002376 3.2e-11 72.4 136 28.7
Peaxi162Scf00347g00918 Petunia axillaris HOM05D002441 ORTHO05D002376 9.4e-11 70.9 75 49.3
arahy.Tifrunner.gnm1.ann1.1X530R Arachis hypogaea HOM05D002441 ORTHO05D002376 1.2e-10 70.5 143 28.0
arahy.Tifrunner.gnm1.ann1.521VL4 Arachis hypogaea HOM05D002441 ORTHO05D002376 2.1e-10 69.7 161 30.4
Nitab4.5_0007040g0020 Nicotiana tabacum HOM05D002441 ORTHO05D002376 3.6e-10 68.9 69 40.6
arahy.Tifrunner.gnm1.ann1.RLQ2A3 Arachis hypogaea HOM05D002441 ORTHO05D008317 4.6e-10 68.6 142 27.5
Nitab4.5_0004430g0010 Nicotiana tabacum HOM05D002441 ORTHO05D008317 7.9e-10 67.8 83 41.0
arahy.Tifrunner.gnm1.ann1.HC104Q Arachis hypogaea HOM05D002441 ORTHO05D002376 1.0e-09 67.4 132 29.5
Nitab4.5_0014003g0010 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.0e-09 67.4 68 52.9
arahy.Tifrunner.gnm1.ann1.36ZJIB Arachis hypogaea HOM05D002441 ORTHO05D002376 3.0e-09 65.9 144 29.2
arahy.Tifrunner.gnm1.ann1.54XB95 Arachis hypogaea HOM05D002441 ORTHO05D002376 3.0e-09 65.9 130 29.2
Medtr1g052715 Medicago truncatula HOM05D008036 ORTHO05D000174 5.1e-09 65.1 143 28.0
Nitab4.5_0001851g0030 Nicotiana tabacum HOM05D002441 ORTHO05D008317 5.1e-09 65.1 88 36.4
arahy.Tifrunner.gnm1.ann1.M21JEJ Arachis hypogaea HOM05D002441 ORTHO05D002376 8.8e-09 64.3 138 28.3
arahy.Tifrunner.gnm1.ann1.0E3QWF Arachis hypogaea HOM05D002441 ORTHO05D002376 1.1e-08 63.9 129 31.0
arahy.Tifrunner.gnm1.ann1.481FMC Arachis hypogaea HOM05D002441 ORTHO05D002376 1.1e-08 63.9 124 28.2
Medtr7g096440 Medicago truncatula HOM05D000096 ORTHO05D000045 1.1e-08 63.9 141 28.4
SGA_v2.0_scaffold319G48528 Striga asiatica HOM05D011754 ORTHO05D014689 1.1e-08 63.9 130 25.4
Nitab4.5_0005864g0030 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.5e-08 63.5 68 50.0
arahy.Tifrunner.gnm1.ann1.3JX2I6 Arachis hypogaea HOM05D002441 ORTHO05D002376 2.5e-08 62.8 98 30.6
arahy.Tifrunner.gnm1.ann1.U768Z5 Arachis hypogaea HOM05D002441 ORTHO05D002376 2.5e-08 62.8 98 30.6
Nitab4.5_0004881g0100 Nicotiana tabacum HOM05D002441 ORTHO05D008317 2.5e-08 62.8 68 50.0
arahy.Tifrunner.gnm1.ann1.I3CTXH Arachis hypogaea HOM05D002441 ORTHO05D002376 3.3e-08 62.4 114 29.8
EL10Ac7g16273 Beta vulgaris HOM05D000353 ORTHO05D000174 1.7e-07 60.1 141 24.8
Nitab4.5_0000365g0120 Nicotiana tabacum HOM05D002441 ORTHO05D002376 1.7e-07 60.1 98 33.7
SGA_v2.0_scaffold101G29754 Striga asiatica HOM05D011754 ORTHO05D014689 2.8e-07 59.3 130 23.8
SGA_v2.0_scaffold29G12331 Striga asiatica HOM05D010852 ORTHO05D002376 2.8e-07 59.3 141 27.0
AL1G48730 Arabidopsis lyrata HOM05D000353 ORTHO05D031316 3.7e-07 58.9 139 25.2
Nitab4.5_0000632g0070 Nicotiana tabacum HOM05D002441 ORTHO05D008317 3.7e-07 58.9 138 30.4
Nitab4.5_0014003g0030 Nicotiana tabacum HOM05D002441 ORTHO05D008317 3.7e-07 58.9 43 53.5
SGA_v2.0_scaffold59G20735 Striga asiatica HOM05D010852 ORTHO05D002376 3.7e-07 58.9 141 27.0
CAN.G981.12 Capsicum annuum HOM05D002441 ORTHO05D008317 4.8e-07 58.5 67 43.3
SGA_v2.0_scaffold30G12418 Striga asiatica HOM05D011787 ORTHO05D008317 4.8e-07 58.5 97 30.9
Thhalv10000001m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 6.3e-07 58.2 148 27.7
Thhalv10023073m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 6.3e-07 58.2 148 27.7
Thhalv10029167m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 6.3e-07 58.2 139 25.9
SGA_v2.0_scaffold167G38409 Striga asiatica HOM05D010852 ORTHO05D002376 6.3e-07 58.2 141 26.2
AL4G27470 Arabidopsis lyrata HOM05D006838 ORTHO05D008915 1.1e-06 57.4 136 25.7
SGA_v2.0_scaffold250G44995 Striga asiatica HOM05D010852 ORTHO05D002376 1.1e-06 57.4 141 26.2
Nitab4.5_0000955g0050 Nicotiana tabacum HOM05D002441 ORTHO05D008317 2.4e-06 56.2 39 51.3
arahy.Tifrunner.gnm1.ann1.YP63XJ Arachis hypogaea HOM05D002441 ORTHO05D002376 3.1e-06 55.8 135 26.7
BcaC05g28066 Brassica carinata HOM05D000353 ORTHO05D000174 3.1e-06 55.8 141 21.3
C05p40800 Brassica napus HOM05D000353 ORTHO05D000174 3.1e-06 55.8 141 21.3
SGA_v2.0_scaffold69G23109 Striga asiatica HOM05D011787 ORTHO05D008317 3.1e-06 55.8 97 29.9
Nitab4.5_0006452g0050 Nicotiana tabacum HOM05D002441 ORTHO05D008317 4.1e-06 55.5 52 55.8
SGA_v2.0_scaffold53G19356 Striga asiatica HOM05D011787 ORTHO05D008317 4.1e-06 55.5 143 27.3
Thhalv10003062m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 5.3e-06 55.1 139 24.5
BraA02t07226Z Brassica rapa HOM05D000353 ORTHO05D000174 6.9e-06 54.7 136 23.5
arahy.Tifrunner.gnm1.ann1.ZB4QDD Arachis hypogaea HOM05D002441 ORTHO05D002376 9.1e-06 54.3 77 33.8
Nitab4.5_0008637g0040 Nicotiana tabacum HOM05D002441 ORTHO05D008317 9.1e-06 54.3 41 58.5


User provided reference genes

Program Settings