Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000937g0110 Nicotiana tabacum HOM05D005659 ORTHO05D007059 1.1e-46 189.5 87 100.0
Peaxi162Scf00091g00713 Petunia axillaris HOM05D005659 ORTHO05D007059 1.0e-44 183.0 87 94.3
Solyc06g074200.4 Solanum lycopersicum HOM05D005659 ORTHO05D007059 1.0e-44 183.0 87 93.1
Sopen06g030620 Solanum pennellii HOM05D005659 ORTHO05D007059 1.0e-44 183.0 87 93.1
PGSC0003DMG400005890 Solanum tuberosum HOM05D005659 ORTHO05D007059 1.3e-44 182.6 87 92.0
CAN.G919.41 Capsicum annuum HOM05D005659 ORTHO05D007059 1.9e-43 178.7 87 92.0
BcaC07g42532 Brassica carinata HOM05D005659 ORTHO05D007059 2.1e-42 175.3 87 89.7
BcaB07g34086 Brassica carinata HOM05D005659 ORTHO05D007059 4.7e-42 174.1 87 89.7
A06p05400 Brassica napus HOM05D005659 ORTHO05D007059 4.7e-42 174.1 87 89.7
C05p06520 Brassica napus HOM05D005659 ORTHO05D007059 4.7e-42 174.1 87 89.7
BolC5t29412H Brassica oleracea HOM05D005659 ORTHO05D007059 4.7e-42 174.1 87 89.7
BraA06t23749Z Brassica rapa HOM05D005659 ORTHO05D007059 4.7e-42 174.1 87 89.7
Nitab4.5_0006903g0010 Nicotiana tabacum HOM05D005659 ORTHO05D007059 4.7e-42 174.1 84 90.5
BcaC07g41946 Brassica carinata HOM05D005659 ORTHO05D007059 8.0e-42 173.3 87 87.4
A09p65930 Brassica napus HOM05D005659 ORTHO05D007059 8.0e-42 173.3 87 87.4
C08p50030 Brassica napus HOM05D005659 ORTHO05D007059 8.0e-42 173.3 87 87.4
BraA09t41937Z Brassica rapa HOM05D005659 ORTHO05D007059 8.0e-42 173.3 87 87.4
Sp1g07030 Schrenkiella parvula HOM05D005659 ORTHO05D007059 8.0e-42 173.3 87 88.5
AT1G08380 Arabidopsis thaliana HOM05D005659 ORTHO05D007059 1.8e-41 172.2 84 90.5
Carub.0001s0773 Capsella rubella HOM05D005659 ORTHO05D007059 1.8e-41 172.2 84 90.5
BolC8t52533H Brassica oleracea HOM05D005659 ORTHO05D007059 2.3e-41 171.8 87 86.2
AL1G18790 Arabidopsis lyrata HOM05D005659 ORTHO05D007059 4.0e-41 171.0 84 89.3
BcaB03g13338 Brassica carinata HOM05D005659 ORTHO05D007059 4.0e-41 171.0 87 87.4
A08p35240 Brassica napus HOM05D005659 ORTHO05D007059 4.0e-41 171.0 87 87.4
MELO3C025587.2 Cucumis melo HOM05D005659 ORTHO05D007059 4.0e-41 171.0 87 88.5
Cpa.g.sc195.32 Carica papaya HOM05D005659 ORTHO05D007059 6.8e-41 170.2 84 89.3
Sabra04G0134500 Salix brachista HOM05D005659 ORTHO05D007059 6.8e-41 170.2 87 88.5
ECA236G2734 Erigeron canadensis HOM05D005659 ORTHO05D007059 8.9e-41 169.9 87 89.7
Medtr4g052420 Medicago truncatula HOM05D005659 ORTHO05D007059 8.9e-41 169.9 87 87.4
Aa31sc785G10 Aethionema arabicum HOM05D005659 ORTHO05D007059 1.2e-40 169.5 84 88.1
CARHR008270 Cardamine hirsuta HOM05D005659 ORTHO05D007059 1.2e-40 169.5 87 86.2
Ciclev10029515m.g Citrus clementina HOM05D005659 ORTHO05D007059 1.2e-40 169.5 87 87.4
vmacro14338 Vaccinium macrocarpon HOM05D005659 ORTHO05D007059 1.5e-40 169.1 84 88.1
Actinidia37070 Actinidia chinensis HOM05D005659 ORTHO05D007059 2.0e-40 168.7 84 86.9
Lsat_1_v5_gn_7_85921 Lactuca sativa HOM05D005659 ORTHO05D007059 2.0e-40 168.7 87 88.5
Potri.004G199400 Populus trichocarpa HOM05D005659 ORTHO05D007059 2.0e-40 168.7 87 86.2
Sc12g0004680 Simmondsia chinensis HOM05D005659 ORTHO05D007059 2.0e-40 168.7 84 88.1
DCAR_012226 Daucus carota HOM05D005659 ORTHO05D007059 2.6e-40 168.3 84 89.3
C08p03620 Brassica napus HOM05D005659 ORTHO05D007059 3.4e-40 167.9 87 86.2
Ca_26075_v3 Cicer arietinum L. HOM05D005659 ORTHO05D007059 3.4e-40 167.9 84 88.1
Dinv22811 Davidia involucrata HOM05D005659 ORTHO05D007059 4.4e-40 167.5 84 86.9
HanXRQChr04g0128561 Helianthus annuus HOM05D005659 ORTHO05D007059 4.4e-40 167.5 87 87.4
Psat7g186640 Pisum sativum HOM05D005659 ORTHO05D007059 4.4e-40 167.5 84 88.1
CsaV3_1G015100 Cucumis sativus L. HOM05D005659 ORTHO05D007059 5.8e-40 167.2 87 86.2
Sabra09G0125800 Salix brachista HOM05D005659 ORTHO05D007059 5.8e-40 167.2 84 89.3
THA.LOC104826438 Tarenaya hassleriana HOM05D005659 ORTHO05D007059 5.8e-40 167.2 84 85.7
ClCG01G011760 Citrullus lanatus HOM05D005659 ORTHO05D007059 7.5e-40 166.8 87 86.2
FAN21G2850 Fragaria x ananassa HOM05D005659 ORTHO05D007059 7.5e-40 166.8 84 86.9
Sed0025059 Sechium edule HOM05D005659 ORTHO05D007059 7.5e-40 166.8 87 86.2
FAN16G1033 Fragaria x ananassa HOM05D005659 ORTHO05D007059 1.7e-39 165.6 84 85.7
FvH4_3g25770 Fragaria vesca HOM05D005659 ORTHO05D007059 2.2e-39 165.2 84 85.7
FAN11G1786 Fragaria x ananassa HOM05D005659 ORTHO05D007059 2.2e-39 165.2 84 85.7
FAN25G1572 Fragaria x ananassa HOM05D005659 ORTHO05D007059 2.2e-39 165.2 84 85.7
MD03G1150500 Malus domestica HOM05D005659 ORTHO05D007059 2.2e-39 165.2 87 85.1
MD11G1169900 Malus domestica HOM05D005659 ORTHO05D007059 2.9e-39 164.9 87 85.1
CSS0022105 Camellia sinensis var. sinensis HOM05D005659 ORTHO05D007059 3.7e-39 164.5 84 84.5
CSS0045008 Camellia sinensis var. sinensis HOM05D005659 ORTHO05D007059 3.7e-39 164.5 84 84.5
Oeu002356.1 Olea europaea HOM05D005659 ORTHO05D007059 3.7e-39 164.5 84 86.9
Prupe.6G137400 Prunus persica HOM05D005659 ORTHO05D007059 3.7e-39 164.5 84 88.1
TPR.G17220 Trifolium pratense HOM05D005659 ORTHO05D007059 3.7e-39 164.5 84 88.1
EL10Ac4g08175 Beta vulgaris HOM05D005659 ORTHO05D007059 4.9e-39 164.1 84 86.9
Manes.04G000900 Manihot esculenta HOM05D005659 ORTHO05D007059 4.9e-39 164.1 84 84.5
PGR102G0055 Punica granatum HOM05D005659 ORTHO05D007059 4.9e-39 164.1 84 84.5
arahy.Tifrunner.gnm1.ann1.QDSR7W Arachis hypogaea HOM05D005659 ORTHO05D007059 1.1e-38 162.9 84 85.7
HPP92_009876 Vanilla planifolia HOM05D005659 ORTHO05D007059 1.1e-38 162.9 84 85.7
GSVIVG01036077001 Vitis vinifera HOM05D005659 ORTHO05D007059 1.1e-38 162.9 84 85.7
Potri.009G160800 Populus trichocarpa HOM05D005659 ORTHO05D007059 1.4e-38 162.5 84 85.7
SGA_v2.0_scaffold7G03995 Striga asiatica HOM05D005659 ORTHO05D007059 1.4e-38 162.5 84 84.5
Actinidia35474 Actinidia chinensis HOM05D005659 ORTHO05D007059 1.9e-38 162.2 84 83.3
CANSAT54G0546 Cannabis sativa HOM05D005659 ORTHO05D007059 1.9e-38 162.2 84 86.9
Cc01_g08780 Coffea canephora HOM05D005659 ORTHO05D007059 1.9e-38 162.2 87 82.8
Hma1.2p1_2164F.1_g315750 Hydrangea macrophylla HOM05D005659 ORTHO05D007059 2.4e-38 161.8 84 83.3
RcHm_v2.0_Chr5g0046981 Rosa chinensis HOM05D005659 ORTHO05D007059 2.4e-38 161.8 84 83.3
SalBow6G0820 Salvia bowleyana HOM05D005659 ORTHO05D007059 2.4e-38 161.8 84 84.5
arahy.Tifrunner.gnm1.ann1.MVQ7LV Arachis hypogaea HOM05D005659 ORTHO05D007059 3.2e-38 161.4 84 85.7
MSTRG.18774 Avicennia marina HOM05D005659 ORTHO05D007059 4.1e-38 161.0 84 83.3
EL10Ac4g08170 Beta vulgaris HOM05D005659 ORTHO05D007059 4.1e-38 161.0 84 85.7
Thecc.09G277800 Theobroma cacao HOM05D005659 ORTHO05D007059 4.1e-38 161.0 84 83.3
ATR0579G079 Amborella trichopoda HOM05D005659 ORTHO05D007059 5.4e-38 160.6 84 82.1
VMungo1127G0741 Vigna mungo HOM05D005659 ORTHO05D007059 5.4e-38 160.6 84 85.7
Atru.chr3.3161 Acer truncatum HOM05D005659 ORTHO05D007059 7.0e-38 160.2 84 81.0
Cfa009983 Carpinus fangiana HOM05D005659 ORTHO05D007059 7.0e-38 160.2 84 82.1
Migut.D02409 Erythranthe guttata HOM05D005659 ORTHO05D007059 9.2e-38 159.8 84 84.5
Glyma.12G092000 Glycine max HOM05D005659 ORTHO05D007059 9.2e-38 159.8 84 83.3
Gohir.A05G079200 Gossypium hirsutum HOM05D005659 ORTHO05D007059 9.2e-38 159.8 84 84.5
Gohir.D05G082100 Gossypium hirsutum HOM05D005659 ORTHO05D007059 9.2e-38 159.8 84 84.5
MBI17_g28186_MAGBIO Magnolia biondii HOM05D005659 ORTHO05D007059 9.2e-38 159.8 84 83.3
Phvul.011G096400 Phaseolus vulgaris HOM05D005659 ORTHO05D007059 1.2e-37 159.5 84 83.3
BraA08t35432Z Brassica rapa HOM05D005659 ORTHO05D007059 2.0e-37 158.7 87 83.9
Haze_23342 Corylus avellana HOM05D005659 ORTHO05D007059 2.0e-37 158.7 84 82.1
Gohir.D07G115000 Gossypium hirsutum HOM05D005659 ORTHO05D007059 2.0e-37 158.7 84 84.5
Aqoxy4G02709 Aquilegia oxysepala HOM05D005659 ORTHO05D007059 2.7e-37 158.3 87 81.6
CiPaw.14G097600 Carya illinoinensis HOM05D005659 ORTHO05D007059 2.7e-37 158.3 84 83.3
Gorai.009G083700 Gossypium raimondii HOM05D005659 ORTHO05D007059 3.5e-37 157.9 84 83.3
Lalb_Chr03g0028281 Lupinus albus HOM05D005659 ORTHO05D007059 3.5e-37 157.9 84 85.7
PSO339G3866 Papaver somniferum HOM05D005659 ORTHO05D007059 3.5e-37 157.9 87 80.5
PSO384G5049 Papaver somniferum HOM05D005659 ORTHO05D007059 3.5e-37 157.9 87 80.5
Zm00001eb083680 Zea mays HOM05D005659 ORTHO05D007059 3.5e-37 157.9 87 80.5
TWI75G1160 Tripterygium wilfordii HOM05D005659 ORTHO05D007059 4.6e-37 157.5 84 83.3
Glyma.11G181100 Glycine max HOM05D005659 ORTHO05D007059 1.0e-36 156.4 84 83.3
Gorai.001G123200 Gossypium raimondii HOM05D005659 ORTHO05D007059 1.0e-36 156.4 84 83.3
Lj3g0027363 Lotus japonicus HOM05D005659 ORTHO05D007059 1.0e-36 156.4 84 82.1
Os04g0414700 Oryza sativa ssp. japonica HOM05D005659 ORTHO05D007059 1.0e-36 156.4 87 80.5
CDE02G1582 Ceratophyllum demersum HOM05D005659 ORTHO05D007059 1.7e-36 155.6 87 77.0
CDE08G1285 Ceratophyllum demersum HOM05D005659 ORTHO05D007059 3.0e-36 154.8 87 77.0
SEGI_08129 Sequoiadendron giganteum HOM05D005659 ORTHO05D007059 3.9e-36 154.5 79 83.5
Eucgr.B03824 Eucalyptus grandis HOM05D005659 ORTHO05D007059 5.0e-36 154.1 84 78.6
Mapoly0064s0077 Marchantia polymorpha HOM05D005659 ORTHO05D007059 5.0e-36 154.1 86 76.7
unitig_0.g1472 Utricularia gibba HOM05D005659 ORTHO05D007059 6.6e-36 153.7 84 81.0
Duzib170G0332 Durio zibethinus HOM05D005659 ORTHO05D007059 1.1e-35 152.9 84 78.6
Pp3c15_16690 Physcomitrium patens HOM05D005659 ORTHO05D007059 2.8e-34 148.3 85 76.5
SMO163G0051 Selaginella moellendorffii HOM05D005659 ORTHO05D007059 3.6e-34 147.9 84 77.4
Pp3c15_16700 Physcomitrium patens HOM05D005659 ORTHO05D007059 8.0e-34 146.7 85 74.1
BcaB03g13340 Brassica carinata HOM05D005659 ORTHO05D007059 3.5e-29 131.3 87 71.3
unitig_88.g27645 Utricularia gibba HOM05D005659 ORTHO05D007059 5.6e-27 124.0 67 80.6
Thhalv10009047m.g Eutrema salsugineum HOM05D005659 ORTHO05D007059 1.4e-22 109.4 58 84.5
ATR0772G031 Amborella trichopoda HOM05D005659 ORTHO05D007059 9.2e-22 106.7 58 84.5
Rhsim01G0203000 Rhododendron simsii HOM05D005659 ORTHO05D007059 9.2e-22 106.7 59 83.1
Nn2g14238 Nelumbo nucifera HOM05D005659 ORTHO05D007059 1.2e-21 106.3 56 80.4
Hund18778 Selenicereus undatus HOM05D005659 ORTHO05D007059 4.6e-21 104.4 55 83.6
TAR633G2174 Trochodendron aralioides HOM05D005659 ORTHO05D007059 4.6e-21 104.4 55 85.5
AUR62001528 Chenopodium quinoa HOM05D005659 ORTHO05D007059 2.3e-20 102.1 55 81.8
QL01p011787 Quercus lobata HOM05D005659 ORTHO05D007059 8.6e-20 100.1 54 83.3
Ah.08g223250 Amaranthus hybridus HOM05D005659 ORTHO05D007059 1.9e-19 99.0 53 84.9
Cre07.g334550 Chlamydomonas reinhardtii HOM05D005659 ORTHO05D007059 3.1e-17 91.7 76 53.9
MCO01G581 Micromonas commoda HOM05D005659 ORTHO05D007059 8.4e-15 83.6 86 44.2
Nitab4.5_0005472g0080 Nicotiana tabacum HOM05D005659 ORTHO05D007059 1.2e-13 79.7 54 75.9
Peaxi162Scf00345g01024 Petunia axillaris HOM05D005659 ORTHO05D007059 2.5e-11 72.0 30 96.7
TAR623G1200 Trochodendron aralioides HOM05D005659 ORTHO05D007059 3.2e-06 55.1 26 92.3


User provided reference genes

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