Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000936g0120 Nicotiana tabacum HOM05D000664 ORTHO05D000491 2.2e-182 642.1 313 100.0
Nitab4.5_0000053g0120 Nicotiana tabacum HOM05D000664 ORTHO05D000491 2.4e-80 303.1 301 56.8
Nitab4.5_0005977g0010 Nicotiana tabacum HOM05D000664 ORTHO05D000491 1.2e-79 300.8 301 55.8
CAN.G375.29 Capsicum annuum HOM05D000664 ORTHO05D000491 3.9e-22 109.8 177 35.6
Peaxi162Scf00111g01479 Petunia axillaris HOM05D000664 ORTHO05D000491 4.5e-18 96.3 172 34.3
Dinv26463 Davidia involucrata HOM05D000664 ORTHO05D000491 5.9e-18 95.9 293 28.3
TAR626G1239 Trochodendron aralioides HOM05D000664 ORTHO05D000491 2.9e-17 93.6 369 25.2
Nitab4.5_0000413g0140 Nicotiana tabacum HOM05D000664 ORTHO05D000491 8.5e-17 92.0 101 44.6
Nitab4.5_0011101g0010 Nicotiana tabacum HOM05D000664 ORTHO05D000491 1.1e-16 91.7 101 47.5
PGSC0003DMG400014133 Solanum tuberosum HOM05D000664 ORTHO05D000491 1.1e-16 91.7 293 29.7
CAN.G407.34 Capsicum annuum HOM05D000664 ORTHO05D000491 1.9e-16 90.9 288 27.8
Solyc03g117270.1 Solanum lycopersicum HOM05D000664 ORTHO05D000491 7.2e-16 89.0 288 28.8
Thecc.06G054900 Theobroma cacao HOM05D000664 ORTHO05D000491 7.2e-16 89.0 357 26.3
Actinidia13606 Actinidia chinensis HOM05D000664 ORTHO05D000491 9.4e-16 88.6 299 26.8
Cc06_g22190 Coffea canephora HOM05D000664 ORTHO05D000491 9.4e-16 88.6 353 25.5
Sopen03g036160 Solanum pennellii HOM05D000664 ORTHO05D000491 9.4e-16 88.6 288 29.2
FAN07G0903 Fragaria x ananassa HOM05D000664 ORTHO05D000491 1.6e-15 87.8 343 25.9
Nitab4.5_0013676g0010 Nicotiana tabacum HOM05D000664 ORTHO05D000491 2.1e-15 87.4 164 32.9
FAN17G0956 Fragaria x ananassa HOM05D000664 ORTHO05D000491 2.7e-15 87.0 353 24.6
Peaxi162Scf00332g10026 Petunia axillaris HOM05D000664 ORTHO05D000491 2.7e-15 87.0 295 26.8
FAN22G1400 Fragaria x ananassa HOM05D000664 ORTHO05D000491 3.6e-15 86.7 355 24.5
Rhsim03G0162400 Rhododendron simsii HOM05D000664 ORTHO05D000491 4.6e-15 86.3 167 32.3
TAR626G1309 Trochodendron aralioides HOM05D000664 ORTHO05D000491 4.6e-15 86.3 345 26.1
Nitab4.5_0002322g0160 Nicotiana tabacum HOM05D000664 ORTHO05D000491 6.1e-15 85.9 293 27.3
Nitab4.5_0004217g0030 Nicotiana tabacum HOM05D000664 ORTHO05D000491 1.0e-14 85.1 288 27.4
TAR626G1797 Trochodendron aralioides HOM05D000664 ORTHO05D000491 2.3e-14 84.0 277 27.1
QL05p088450 Quercus lobata HOM05D000664 ORTHO05D000491 3.0e-14 83.6 100 42.0
Dinv25521 Davidia involucrata HOM05D000664 ORTHO05D000491 3.9e-14 83.2 287 27.5
Nitab4.5_0002322g0180 Nicotiana tabacum HOM05D000664 ORTHO05D000491 3.9e-14 83.2 176 30.7
Gohir.A07G043150 Gossypium hirsutum HOM05D000664 ORTHO05D000491 5.1e-14 82.8 281 25.3
Ciclev10005096m.g Citrus clementina HOM05D000664 ORTHO05D000491 8.8e-14 82.0 376 24.2
Rhsim03G0162000 Rhododendron simsii HOM05D000664 ORTHO05D000491 8.8e-14 82.0 352 23.6
Thecc.03G149500 Theobroma cacao HOM05D000664 ORTHO05D000491 8.8e-14 82.0 351 26.5
Gohir.D10G001700 Gossypium hirsutum HOM05D000664 ORTHO05D000491 1.1e-13 81.6 349 24.9
Gorai.001G050700 Gossypium raimondii HOM05D000664 ORTHO05D000491 1.1e-13 81.6 265 25.7
Nitab4.5_0004217g0020 Nicotiana tabacum HOM05D000664 ORTHO05D000491 1.5e-13 81.3 294 26.5
CiPaw.01G207700 Carya illinoinensis HOM05D000664 ORTHO05D000491 2.5e-13 80.5 102 40.2
Atru.chr1.2627 Acer truncatum HOM05D007236 ORTHO05D009150 3.3e-13 80.1 173 30.6
Lsat_1_v5_gn_9_51261 Lactuca sativa HOM05D000664 ORTHO05D000491 3.3e-13 80.1 229 30.1
CiPaw.15G154900 Carya illinoinensis HOM05D000664 ORTHO05D000491 4.3e-13 79.7 348 24.7
Gorai.011G002100 Gossypium raimondii HOM05D000664 ORTHO05D000491 4.3e-13 79.7 275 27.6
Peaxi162Scf00332g10027 Petunia axillaris HOM05D000664 ORTHO05D000491 4.3e-13 79.7 88 44.3
Cc06_g22380 Coffea canephora HOM05D000664 ORTHO05D000491 5.7e-13 79.3 170 31.2
FAN07G1045 Fragaria x ananassa HOM05D000664 ORTHO05D000491 5.7e-13 79.3 326 24.5
Gohir.D11G288100 Gossypium hirsutum HOM05D000664 ORTHO05D000491 5.7e-13 79.3 205 29.3
Solyc07g015800.1 Solanum lycopersicum HOM05D000664 ORTHO05D000491 5.7e-13 79.3 176 30.7
GSVIVG01017506001 Vitis vinifera HOM05D000664 ORTHO05D000491 5.7e-13 79.3 343 23.3
Gohir.A10G001600 Gossypium hirsutum HOM05D000664 ORTHO05D000491 7.4e-13 79.0 349 24.9
Nitab4.5_0000413g0120 Nicotiana tabacum HOM05D000664 ORTHO05D000491 7.4e-13 79.0 100 44.0
Sopen07g005630 Solanum pennellii HOM05D000664 ORTHO05D000491 7.4e-13 79.0 176 31.2
Thecc.06G054800 Theobroma cacao HOM05D000664 ORTHO05D000491 9.7e-13 78.6 348 23.3
Lj3A385T7 Lonicera japonica HOM05D000664 ORTHO05D000491 2.2e-12 77.4 293 27.6
Peaxi162Scf00320g00071 Petunia axillaris HOM05D000664 ORTHO05D000491 2.2e-12 77.4 100 41.0
Rhsim03G0162100 Rhododendron simsii HOM05D000664 ORTHO05D000491 2.2e-12 77.4 356 23.6
PGSC0003DMG400029956 Solanum tuberosum HOM05D000664 ORTHO05D000491 2.2e-12 77.4 101 39.6
Potri.010G254000 Populus trichocarpa HOM05D000664 ORTHO05D000491 4.8e-12 76.3 273 26.7
Thecc.07G025800 Theobroma cacao HOM05D000664 ORTHO05D000491 4.8e-12 76.3 203 30.5
CAN.G407.35 Capsicum annuum HOM05D000664 ORTHO05D000491 6.3e-12 75.9 178 28.1
CAN.G54.4 Capsicum annuum HOM05D000664 ORTHO05D000491 6.3e-12 75.9 99 39.4
FvH4_4g06320 Fragaria vesca HOM05D000664 ORTHO05D000491 6.3e-12 75.9 343 25.1
PSO170G0618 Papaver somniferum HOM05D000664 ORTHO05D000491 1.4e-11 74.7 101 33.7
Peaxi162Scf00257g00220 Petunia axillaris HOM05D000664 ORTHO05D000491 1.8e-11 74.3 260 26.9
Rhsim08G0251200 Rhododendron simsii HOM05D000664 ORTHO05D000491 1.8e-11 74.3 176 29.0
Duzib068G1024 Durio zibethinus HOM05D000664 ORTHO05D000491 2.4e-11 73.9 356 24.2
Lsat_1_v5_gn_9_51341 Lactuca sativa HOM05D000664 ORTHO05D000491 2.4e-11 73.9 368 22.8
Nn3g18583 Nelumbo nucifera HOM05D000664 ORTHO05D000491 2.4e-11 73.9 98 42.9
Nitab4.5_0004055g0050 Nicotiana tabacum HOM05D000664 ORTHO05D000491 2.4e-11 73.9 304 25.7
Actinidia31675 Actinidia chinensis HOM05D000664 ORTHO05D000491 3.1e-11 73.6 169 26.0
Duzib205G1254 Durio zibethinus HOM05D000664 ORTHO05D000491 4.1e-11 73.2 285 25.3
Atru.chr1.869 Acer truncatum HOM05D000664 ORTHO05D000491 5.3e-11 72.8 329 24.3
Haze_19047 Corylus avellana HOM05D000664 ORTHO05D000491 5.3e-11 72.8 362 23.5
Oeu060863.1 Olea europaea HOM05D000664 ORTHO05D000491 5.3e-11 72.8 311 26.4
RcHm_v2.0_Chr4g0444981 Rosa chinensis HOM05D000664 ORTHO05D000491 5.3e-11 72.8 275 30.2
Lj8C33T14 Lonicera japonica HOM05D000664 ORTHO05D000491 1.2e-10 71.6 279 25.8
FvH4_4g06310 Fragaria vesca HOM05D000664 ORTHO05D000491 2.0e-10 70.9 299 26.1
FAN12G4155 Fragaria x ananassa HOM05D000664 ORTHO05D000491 2.0e-10 70.9 298 26.2
Lj5g0025357 Lotus japonicus HOM05D000664 ORTHO05D000491 2.0e-10 70.9 269 22.7
FAN22G2265 Fragaria x ananassa HOM05D000664 ORTHO05D000491 2.6e-10 70.5 299 25.8
MD16G1240100 Malus domestica HOM05D000664 ORTHO05D000491 2.6e-10 70.5 358 23.7
PSO063G1615 Papaver somniferum HOM05D000664 ORTHO05D000491 2.6e-10 70.5 241 27.4
COL.COLO4_37365 Corchorus olitorius HOM05D000664 ORTHO05D000491 3.4e-10 70.1 297 25.3
PSO782G1546 Papaver somniferum HOM05D000664 ORTHO05D000491 3.4e-10 70.1 163 27.0
Dinv16863 Davidia involucrata HOM05D000664 ORTHO05D000491 4.5e-10 69.7 164 29.9
Dinv26464 Davidia involucrata HOM05D000664 ORTHO05D000491 4.5e-10 69.7 355 23.7
PSO601G0014 Papaver somniferum HOM05D000664 ORTHO05D000491 4.5e-10 69.7 183 30.6
RcHm_v2.0_Chr4g0398041 Rosa chinensis HOM05D000664 ORTHO05D000491 4.5e-10 69.7 120 33.3
Gohir.D12G199300 Gossypium hirsutum HOM05D000664 ORTHO05D000491 5.9e-10 69.3 359 23.4
Gorai.008G214500 Gossypium raimondii HOM05D000664 ORTHO05D000491 5.9e-10 69.3 359 23.4
PSO229G0005 Papaver somniferum HOM05D000664 ORTHO05D000491 5.9e-10 69.3 183 30.6
PSO424G0001 Papaver somniferum HOM05D000664 ORTHO05D000491 5.9e-10 69.3 163 31.9
PSO542G0001 Papaver somniferum HOM05D000664 ORTHO05D000491 5.9e-10 69.3 163 31.9
PSO593G0001 Papaver somniferum HOM05D000664 ORTHO05D000491 5.9e-10 69.3 163 31.9
PSO381G0006 Papaver somniferum HOM05D000664 ORTHO05D000491 7.7e-10 68.9 163 31.9
CANSAT56G0713 Cannabis sativa HOM05D000664 ORTHO05D000491 1.0e-09 68.6 262 28.2
Hma1.2p1_1404F.1_g281330 Hydrangea macrophylla HOM05D000664 ORTHO05D000491 1.0e-09 68.6 212 27.4
Manes.14G038100 Manihot esculenta HOM05D000664 ORTHO05D000491 1.0e-09 68.6 280 26.4
ECA232G2763 Erigeron canadensis HOM05D000664 ORTHO05D000491 2.2e-09 67.4 352 21.3
Cfa020730 Carpinus fangiana HOM05D000664 ORTHO05D000491 2.9e-09 67.0 359 24.0
Ciclev10006867m.g Citrus clementina HOM05D000664 ORTHO05D000491 2.9e-09 67.0 349 22.9
FAN07G0651 Fragaria x ananassa HOM05D000664 ORTHO05D000491 2.9e-09 67.0 120 32.5
Rhsim07G0025700 Rhododendron simsii HOM05D000664 ORTHO05D000491 2.9e-09 67.0 341 24.9
Cc00_g00730 Coffea canephora HOM05D000664 ORTHO05D000491 3.8e-09 66.6 173 28.3
COL.COLO4_09747 Corchorus olitorius HOM05D002614 ORTHO05D002794 3.8e-09 66.6 200 30.5
Nitab4.5_0000096g0170 Nicotiana tabacum HOM05D000664 ORTHO05D000491 6.5e-09 65.9 371 22.9
Rhsim01G0013700 Rhododendron simsii HOM05D000664 ORTHO05D000491 8.5e-09 65.5 338 24.3
Rhsim01G0018000 Rhododendron simsii HOM05D000664 ORTHO05D000491 8.5e-09 65.5 358 24.6
FvH4_6g52931 Fragaria vesca HOM05D000664 ORTHO05D000491 1.1e-08 65.1 298 23.8
PSO170G1835 Papaver somniferum HOM05D000664 ORTHO05D000491 1.1e-08 65.1 151 29.1
PSO325G0007 Papaver somniferum HOM05D000664 ORTHO05D000491 1.1e-08 65.1 151 29.1
Rhsim03G0161900 Rhododendron simsii HOM05D000664 ORTHO05D000491 1.1e-08 65.1 181 23.8
SGA_v2.0_scaffold136G35012 Striga asiatica HOM05D000664 ORTHO05D000491 1.1e-08 65.1 173 29.5
TAR627G1137 Trochodendron aralioides HOM05D000664 ORTHO05D000491 1.4e-08 64.7 99 35.4
FvH4_4g13090 Fragaria vesca HOM05D000007 ORTHO05D000521 1.9e-08 64.3 224 25.4
Gohir.A12G196800 Gossypium hirsutum HOM05D000664 ORTHO05D000491 1.9e-08 64.3 302 24.8
PSO063G0730 Papaver somniferum HOM05D000664 ORTHO05D000491 1.9e-08 64.3 363 22.3
Rhsim01G0016900 Rhododendron simsii HOM05D000664 ORTHO05D000491 1.9e-08 64.3 358 24.3
Cc06_g22300 Coffea canephora HOM05D000664 ORTHO05D000491 3.2e-08 63.5 181 27.1
Migut.F00520 Erythranthe guttata HOM05D000664 ORTHO05D000491 3.2e-08 63.5 110 35.5
Rhsim01G0017000 Rhododendron simsii HOM05D000664 ORTHO05D000491 3.2e-08 63.5 358 22.9
Nn8g41006 Nelumbo nucifera HOM05D000664 ORTHO05D000491 4.2e-08 63.2 167 28.7
Rhsim01G0013500 Rhododendron simsii HOM05D000664 ORTHO05D000491 4.2e-08 63.2 346 24.3
Cc06_g22350 Coffea canephora HOM05D000664 ORTHO05D000491 5.5e-08 62.8 353 24.9
Cc06_g22360 Coffea canephora HOM05D000664 ORTHO05D000491 5.5e-08 62.8 203 33.0
Nitab4.5_0006345g0010 Nicotiana tabacum HOM05D000664 ORTHO05D000491 5.5e-08 62.8 79 39.2
Lsat_1_v5_gn_9_51281 Lactuca sativa HOM05D000664 ORTHO05D000491 7.2e-08 62.4 366 21.3
Ciclev10005090m.g Citrus clementina HOM05D000664 ORTHO05D000491 2.1e-07 60.8 353 22.7
FAN09G2634 Fragaria x ananassa HOM05D000664 ORTHO05D000491 2.1e-07 60.8 365 23.6
Rhsim01G0014100 Rhododendron simsii HOM05D000664 ORTHO05D000491 2.1e-07 60.8 328 23.5
Dinv16864 Davidia involucrata HOM05D000664 ORTHO05D000491 2.7e-07 60.5 100 33.0
Rhsim01G0013300 Rhododendron simsii HOM05D000664 ORTHO05D000491 2.7e-07 60.5 366 24.6
Rhsim01G0014600 Rhododendron simsii HOM05D000664 ORTHO05D000491 3.6e-07 60.1 307 23.8
PSO170G1169 Papaver somniferum HOM05D000664 ORTHO05D000491 4.7e-07 59.7 103 33.0
Thecc.03G149600 Theobroma cacao HOM05D000664 ORTHO05D000491 4.7e-07 59.7 81 35.8
ClCG01G004670 Citrullus lanatus HOM05D000664 ORTHO05D000491 6.1e-07 59.3 287 26.1
DCAR_026305 Daucus carota HOM05D000664 ORTHO05D000491 6.1e-07 59.3 111 31.5
FAN05G1881 Fragaria x ananassa HOM05D000664 ORTHO05D000491 7.9e-07 58.9 365 24.4
Hma1.2p1_1883F.1_g306450 Hydrangea macrophylla HOM05D000664 ORTHO05D000491 7.9e-07 58.9 165 26.7
PSO566G0095 Papaver somniferum HOM05D000664 ORTHO05D000491 7.9e-07 58.9 99 33.3
FvH4_6g52080 Fragaria vesca HOM05D000664 ORTHO05D000491 1.0e-06 58.5 363 23.1
Rhsim01G0014800 Rhododendron simsii HOM05D000664 ORTHO05D000491 1.4e-06 58.2 350 23.4
RhsimUnG0092200 Rhododendron simsii HOM05D000664 ORTHO05D000491 1.4e-06 58.2 339 22.4
Thecc.05G238100 Theobroma cacao HOM05D000664 ORTHO05D000491 1.4e-06 58.2 360 25.0
Lj3A384G19 Lonicera japonica HOM05D000664 ORTHO05D000491 2.3e-06 57.4 354 24.0
Rhsim01G0014700 Rhododendron simsii HOM05D000664 ORTHO05D000491 2.3e-06 57.4 150 28.7
HanXRQChr15g0470261 Helianthus annuus HOM05D000664 ORTHO05D000491 3.0e-06 57.0 313 23.3
Hma1.2p1_1045F.1_g251330 Hydrangea macrophylla HOM05D000664 ORTHO05D000491 3.0e-06 57.0 147 28.6
Sabra13G0059200 Salix brachista HOM05D000664 ORTHO05D000491 3.0e-06 57.0 161 29.8
FvH4_6g52062 Fragaria vesca HOM05D000664 ORTHO05D000491 3.9e-06 56.6 363 23.1
FvH4_6g53620 Fragaria vesca HOM05D000664 ORTHO05D000491 3.9e-06 56.6 164 26.2
FAN02G0955 Fragaria x ananassa HOM05D000664 ORTHO05D000491 3.9e-06 56.6 164 26.2
FAN09G0982 Fragaria x ananassa HOM05D000664 ORTHO05D000491 3.9e-06 56.6 303 22.8
FAN12G0986 Fragaria x ananassa HOM05D000664 ORTHO05D000491 3.9e-06 56.6 58 50.0
MD16G1239800 Malus domestica HOM05D000664 ORTHO05D000491 3.9e-06 56.6 81 39.5
Sabra01G0178200 Salix brachista HOM05D000664 ORTHO05D000491 3.9e-06 56.6 56 55.4
FAN14G3142 Fragaria x ananassa HOM05D000664 ORTHO05D000491 5.1e-06 56.2 367 21.3
FAN05G5626 Fragaria x ananassa HOM05D000664 ORTHO05D000491 6.7e-06 55.8 164 26.2
Manes.06G131800 Manihot esculenta HOM05D000664 ORTHO05D000491 6.7e-06 55.8 47 59.6
PSO541G6413 Papaver somniferum HOM05D000664 ORTHO05D000491 6.7e-06 55.8 95 32.6
Dinv26466 Davidia involucrata HOM05D000664 ORTHO05D000491 8.8e-06 55.5 198 28.8


User provided reference genes

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