Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000935g0030 Nicotiana tabacum HOM05D002760 ORTHO05D282278 2.8e-20 101.7 83 100.0
Nitab4.5_0000935g0020 Nicotiana tabacum HOM05D002760 ORTHO05D003169 2.7e-10 68.6 49 81.6
Nitab4.5_0001031g0230 Nicotiana tabacum HOM05D002760 ORTHO05D003169 3.5e-10 68.2 49 79.6
Nitab4.5_0002158g0180 Nicotiana tabacum HOM05D002760 ORTHO05D003169 7.7e-10 67.0 49 79.6
PGSC0003DMG400012625 Solanum tuberosum HOM05D002760 ORTHO05D003169 1.5e-08 62.8 49 75.5
vmacro05909 Vaccinium macrocarpon HOM05D002760 ORTHO05D003169 2.5e-08 62.0 49 73.5
Sopen02g038340 Solanum pennellii HOM05D002760 ORTHO05D003169 3.2e-08 61.6 49 73.5
Nitab4.5_0000559g0090 Nicotiana tabacum HOM05D002760 ORTHO05D003169 5.5e-08 60.8 49 71.4
Nitab4.5_0008949g0030 Nicotiana tabacum HOM05D002760 ORTHO05D003169 5.5e-08 60.8 49 71.4
Rhsim10G0012500 Rhododendron simsii HOM05D002760 ORTHO05D003169 7.2e-08 60.5 49 71.4
Solyc02g093700.3 Solanum lycopersicum HOM05D002760 ORTHO05D003169 7.2e-08 60.5 49 71.4
CAN.G1965.7 Capsicum annuum HOM05D002760 ORTHO05D003169 9.4e-08 60.1 49 71.4
CSS0033299 Camellia sinensis var. sinensis HOM05D002760 ORTHO05D003169 1.6e-07 59.3 49 69.4
CSS0039131 Camellia sinensis var. sinensis HOM05D002760 ORTHO05D003169 1.6e-07 59.3 49 69.4
Peaxi162Scf00420g00248 Petunia axillaris HOM05D002760 ORTHO05D003169 2.1e-07 58.9 49 73.5
Lsat_1_v5_gn_4_184761 Lactuca sativa HOM05D002760 ORTHO05D003169 3.6e-07 58.2 49 67.3
Peaxi162Scf00700g00235 Petunia axillaris HOM05D002760 ORTHO05D003169 3.6e-07 58.2 49 67.3
Solyc03g005120.3 Solanum lycopersicum HOM05D002760 ORTHO05D003169 3.6e-07 58.2 49 69.4
Sopen03g001130 Solanum pennellii HOM05D002760 ORTHO05D003169 3.6e-07 58.2 49 69.4
Actinidia36153 Actinidia chinensis HOM05D002760 ORTHO05D003169 4.7e-07 57.8 49 67.3
CAN.G473.49 Capsicum annuum HOM05D002760 ORTHO05D003169 4.7e-07 57.8 49 67.3
PGSC0003DMG400013431 Solanum tuberosum HOM05D002760 ORTHO05D003169 4.7e-07 57.8 49 67.3
HanXRQChr09g0255751 Helianthus annuus HOM05D002760 ORTHO05D003169 6.1e-07 57.4 49 65.3
Cc07_g00310 Coffea canephora HOM05D002760 ORTHO05D003169 1.0e-06 56.6 49 67.3
Migut.K01431 Erythranthe guttata HOM05D002760 ORTHO05D003169 1.0e-06 56.6 49 67.3
HanXRQChr17g0549461 Helianthus annuus HOM05D002760 ORTHO05D003169 1.4e-06 56.2 50 64.0
ECA232G2081 Erigeron canadensis HOM05D002760 ORTHO05D003169 5.2e-06 54.3 49 65.3
Lju41C45G5 Lonicera japonica HOM05D002252 ORTHO05D002451 5.2e-06 54.3 49 63.3
SalBow7G3951 Salvia bowleyana HOM05D002760 ORTHO05D003169 5.2e-06 54.3 49 63.3
arahy.Tifrunner.gnm1.ann1.KEE7NS Arachis hypogaea HOM05D002760 ORTHO05D003169 6.8e-06 53.9 48 66.7
ECA246G1039 Erigeron canadensis HOM05D002760 ORTHO05D003169 6.8e-06 53.9 54 55.6
arahy.Tifrunner.gnm1.ann1.3RFD6Z Arachis hypogaea HOM05D002760 ORTHO05D003169 8.8e-06 53.5 48 66.7
Lalb_Chr14g0363001 Lupinus albus HOM05D002760 ORTHO05D003169 8.8e-06 53.5 48 68.8
Oeu054660.1 Olea europaea HOM05D002760 ORTHO05D003169 8.8e-06 53.5 49 61.2
GSVIVG01003971001 Vitis vinifera HOM05D002760 ORTHO05D003169 8.8e-06 53.5 50 64.0


User provided reference genes

Program Settings